| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is czcC
Identifier: 119899239
GI number: 119899239
Start: 3234880
End: 3236301
Strand: Direct
Name: czcC
Synonym: azo2949
Alternate gene names: NA
Gene position: 3234880-3236301 (Clockwise)
Preceding gene: 119899238
Following gene: 119899240
Centisome position: 73.92
GC content: 74.12
Gene sequence:
>1422_bases ATGACGCCCCGCCTCCGCCTGCCCGCCGCGCTCGCGGCGGCGCTGCTGCTCGCCGGCTGCGCCAGCACCGCGATCGACGA CAACTACCGCGCCTTGACCGACTACGGCGGCGCCCGGCTCGGCAGCGAGCCGCGCTGGCTGCGCAGCGACGCCGAACGCG AGGCGATGACGCAGGAGGTCGACCGCACTCTCGCCGCCGGCCCGCTCGCCGCCGACGACGCGGTGCGCATCGCGCTCGGC TACAGCCCCGACTTCCAGATCGTGCTCGCCGAAGCAGCTACCGCCTCGGCCGACGCTACCGCCTCGGCGCGGATGCCCAA CCCGGTGTTCAGCTTCGAGAAGCTGGTGCGCCGCCACGACGGCGACACCGAGCTGGACATCGGCCGCTCGCTCGGCATCT CGCTGCTCGACCTGCTGCTGCTCCCCGCCCGGCTGGAGCGCGCCGAACTGCGCCAGCAGCAGACCCGGCTGCAGGCCTCG ACCGCGCTGGTCGAACGCATCACCGCGGTGCGCCAGGCGTGGACGCAGGCGGTGGCCGCCCAGCAGATCGCCGCCGCCTG GGGCCAGCTCACCACCGCCTCGGCCGCGGGCGCCGAACTCGCGCAGCGCATGCGGGTGGTGGGCAACTTCAGCCAGCTGC AGGCGGCGCGCGAACAGTCGCTGCACGCCGATGCGGTGGCAAGCGGAATCCGGGCGCGCCAGACCGCGACCGGCGCGCGC GAGGCGCTGGTGCGCCTGCTCGGCCTGTCGCCGCAACAGGCGGCGACGCTGCGGCTGCCGTCACGCCTGCCCGAGCTGCC TGCCACGCCGCTGGACGAAGCGGGCGTCGGCCGCAGCCTGATCGAGGACCGGCTGGACATCCGCCTCGCGCGCGCCGACC TCGACCGCACCGCAAAGGATCTCGGCCTCACCCGCGTCACCAGCATCGTCAACGGCCTGCATGTGGCCGGCGTGAACAAC AGCGAAACCGGCGAAGCGCCGCAGCGCGGCTTCGAGATCGAGCTGCCGCTGCCGCTGTTCGACTTCGGCGACGCCAGCCG GGCCGGTGCCGAGGCACGCTACCTCGCCGCCTTCAACCGCAGCCTGCAGGTGGCGCGCAACGCCAGTTCGCAGCTGCGCA CCAGCTACGAGGGCTACCGCAACGCCCACGACCTCGCCCGCCACTACCGCGACGAGATCGTGCCGCTGCGCAGCCGCATC GCCGACGAGAGCGTGCTCCAGTACAACGGCATGCTGATCGGCGTGTTCGAGCTGCTCGCCGACAGCCGCAACCGCGCCGC CGGCGTGATCGCCGCGCTCGAAGCCGAACGCGACTTCTGGCTCGCCGATGCCGCGCTGCGCGCCGCCATGCTCGGCACGC CGATCGCCCCGCTCGCGCTGCAGGCGAGCGCCGCCCCCGCCGCCGCTGACGGCGGCCACTGA
Upstream 100 bases:
>100_bases CCGACGAACCGCTGCGCGACTGGCGCGAGGTCAACGACGAGGTCGGCGGCCTGCGCGGCCACGGCGGCCATCTGCAGCCC CAACCGGCGGAGACCGCACG
Downstream 100 bases:
>100_bases GATTCCCGGAGTCTGTCCCCGATGAGCCAAGATCCCAAACCCGACCGCCGCCGTTTTCTCGCCGGTGCCGGCCTCGCCGG CCTGGGCGTGGCCGCCGCCG
Product: putative metal ion efflux outer membrane protein
Products: NA
Alternate protein names: Copper lerance Protein; Copper Resistance-Related Lipoprotein; Outer Membrane Efflux Protein Involved In Copper Resistance; Metal Ion Efflux Outer Membrane Protein; Outer Membrane Protein; Copper Resistance-Related Protein; TypeIsecretion System Outer Membrane Chanel Lipoprotein; Copper Resistance Protein; Outer Membrane Protein-Like Protein; Efflux Protein; Outer Membrane Efflux Protein Involved
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MTPRLRLPAALAAALLLAGCASTAIDDNYRALTDYGGARLGSEPRWLRSDAEREAMTQEVDRTLAAGPLAADDAVRIALG YSPDFQIVLAEAATASADATASARMPNPVFSFEKLVRRHDGDTELDIGRSLGISLLDLLLLPARLERAELRQQQTRLQAS TALVERITAVRQAWTQAVAAQQIAAAWGQLTTASAAGAELAQRMRVVGNFSQLQAAREQSLHADAVASGIRARQTATGAR EALVRLLGLSPQQAATLRLPSRLPELPATPLDEAGVGRSLIEDRLDIRLARADLDRTAKDLGLTRVTSIVNGLHVAGVNN SETGEAPQRGFEIELPLPLFDFGDASRAGAEARYLAAFNRSLQVARNASSQLRTSYEGYRNAHDLARHYRDEIVPLRSRI ADESVLQYNGMLIGVFELLADSRNRAAGVIAALEAERDFWLADAALRAAMLGTPIAPLALQASAAPAAADGGH
Sequences:
>Translated_473_residues MTPRLRLPAALAAALLLAGCASTAIDDNYRALTDYGGARLGSEPRWLRSDAEREAMTQEVDRTLAAGPLAADDAVRIALG YSPDFQIVLAEAATASADATASARMPNPVFSFEKLVRRHDGDTELDIGRSLGISLLDLLLLPARLERAELRQQQTRLQAS TALVERITAVRQAWTQAVAAQQIAAAWGQLTTASAAGAELAQRMRVVGNFSQLQAAREQSLHADAVASGIRARQTATGAR EALVRLLGLSPQQAATLRLPSRLPELPATPLDEAGVGRSLIEDRLDIRLARADLDRTAKDLGLTRVTSIVNGLHVAGVNN SETGEAPQRGFEIELPLPLFDFGDASRAGAEARYLAAFNRSLQVARNASSQLRTSYEGYRNAHDLARHYRDEIVPLRSRI ADESVLQYNGMLIGVFELLADSRNRAAGVIAALEAERDFWLADAALRAAMLGTPIAPLALQASAAPAAADGGH >Mature_472_residues TPRLRLPAALAAALLLAGCASTAIDDNYRALTDYGGARLGSEPRWLRSDAEREAMTQEVDRTLAAGPLAADDAVRIALGY SPDFQIVLAEAATASADATASARMPNPVFSFEKLVRRHDGDTELDIGRSLGISLLDLLLLPARLERAELRQQQTRLQAST ALVERITAVRQAWTQAVAAQQIAAAWGQLTTASAAGAELAQRMRVVGNFSQLQAAREQSLHADAVASGIRARQTATGARE ALVRLLGLSPQQAATLRLPSRLPELPATPLDEAGVGRSLIEDRLDIRLARADLDRTAKDLGLTRVTSIVNGLHVAGVNNS ETGEAPQRGFEIELPLPLFDFGDASRAGAEARYLAAFNRSLQVARNASSQLRTSYEGYRNAHDLARHYRDEIVPLRSRIA DESVLQYNGMLIGVFELLADSRNRAAGVIAALEAERDFWLADAALRAAMLGTPIAPLALQASAAPAAADGGH
Specific function: Unknown
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50580; Mature: 50449
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRLRLPAALAAALLLAGCASTAIDDNYRALTDYGGARLGSEPRWLRSDAEREAMTQEV CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH DRTLAAGPLAADDAVRIALGYSPDFQIVLAEAATASADATASARMPNPVFSFEKLVRRHD HHHHHCCCCCCCCCEEEEECCCCCCEEEEEEHHCCCCCCCCCCCCCCHHHHHHHHHHHCC GDTELDIGRSLGISLLDLLLLPARLERAELRQQQTRLQASTALVERITAVRQAWTQAVAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQIAAAWGQLTTASAAGAELAQRMRVVGNFSQLQAAREQSLHADAVASGIRARQTATGAR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALVRLLGLSPQQAATLRLPSRLPELPATPLDEAGVGRSLIEDRLDIRLARADLDRTAKD HHHHHHHCCCCCHHHEEECHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGLTRVTSIVNGLHVAGVNNSETGEAPQRGFEIELPLPLFDFGDASRAGAEARYLAAFNR HHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHH SLQVARNASSQLRTSYEGYRNAHDLARHYRDEIVPLRSRIADESVLQYNGMLIGVFELLA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH DSRNRAAGVIAALEAERDFWLADAALRAAMLGTPIAPLALQASAAPAAADGGH CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHEECCCCCCCCCCCC >Mature Secondary Structure TPRLRLPAALAAALLLAGCASTAIDDNYRALTDYGGARLGSEPRWLRSDAEREAMTQEV CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH DRTLAAGPLAADDAVRIALGYSPDFQIVLAEAATASADATASARMPNPVFSFEKLVRRHD HHHHHCCCCCCCCCEEEEECCCCCCEEEEEEHHCCCCCCCCCCCCCCHHHHHHHHHHHCC GDTELDIGRSLGISLLDLLLLPARLERAELRQQQTRLQASTALVERITAVRQAWTQAVAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQIAAAWGQLTTASAAGAELAQRMRVVGNFSQLQAAREQSLHADAVASGIRARQTATGAR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALVRLLGLSPQQAATLRLPSRLPELPATPLDEAGVGRSLIEDRLDIRLARADLDRTAKD HHHHHHHCCCCCHHHEEECHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGLTRVTSIVNGLHVAGVNNSETGEAPQRGFEIELPLPLFDFGDASRAGAEARYLAAFNR HHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHH SLQVARNASSQLRTSYEGYRNAHDLARHYRDEIVPLRSRIADESVLQYNGMLIGVFELLA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH DSRNRAAGVIAALEAERDFWLADAALRAAMLGTPIAPLALQASAAPAAADGGH CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA