Click here to switch to the map view.

The map label for this gene is zitB

Identifier: 119899231

GI number: 119899231

Start: 3226773

End: 3227456

Strand: Reverse

Name: zitB

Synonym: azo2941

Alternate gene names: NA

Gene position: 3227456-3226773 (Counterclockwise)

Preceding gene: 119899234

Following gene: 119899229

Centisome position: 73.75

GC content: 68.71

Gene sequence:

>684_bases
ATGCCCGGTTGTAGTTGCGGTTCGAGTTGCGCGCCGCAGACCTCGGTGAGCCCGCGTTTTCGGCGCGCGCTGTGGGTGGC
CCTGGTGATCAACGCGCTGATGTTCGGGGTAGAACTGGTCGCAGGGCTGCACGCCGGTTCGGTGTCGCTGCTGGCGGATG
CGGTGGATTTTGCCGGCGACGCGGCCAACTACGGCATCTCGCTGGCGGTGCTGTCGCTGGGCCTGGCGTGGCGGTCGCGT
GCGGCGCTGGTCAAAGGGTTTTCGATGGCCGGCTACGGCGTGTTCGTGCTGGGCAAGTCCGTGTGGGCGGCGTTCGGCGG
CGTGCCGCCGGAAGCGATGACCATGGGCGCGGTGGCGCTGCTTGCGCTGGTGGCCAACGCGGGGGTCGCGTTGATGCTCT
ACGCCTTTCGCGAAGGCGACGCCAATATGCGTTCGGTGTGGCTGTGCAGCCGCAACGATGCGATCGGCAATGTTGCTGTC
ATCCTCGCCGCGGCGGGTGTCTTCGGCACCGGACAGGGATGGCCGGACATCGTGGTGGCCGGGGTGATGGCGGCGCTGGC
GCTGTCTTCCGGACTGGCGGTGATCCGTCTCGCGCGGAAGGAGCTTGCGGAGCAGGCTGTGCCGGCCGGTTCGGCGGTAC
TGGTGACGTTGGGCACGCCGTCCCGTTCGGACCGCGCCGGCTAA

Upstream 100 bases:

>100_bases
CGATGATGGCGGAAGGGCGCGTAGCGCCCGCGGCAGGCGTCGATTCCGGCTGGGAGGTTGGCTGTGTAAGATTGGCGAAA
AGCCTTGCTGGAGAAAGACG

Downstream 100 bases:

>100_bases
GCGCGGGCCGCCTCAAGCCGGGCTGACGGCGCGCCGCGCAGCGGGGCGTCCGTTGTACGGCGGCTGCTCAGCCCGCCACC
GGCTCCAGCAGTTCTTCGGG

Product: putative zinc transport protein

Products: NA

Alternate protein names: Co/Zn/Cd Efflux System Component; Cation Efflux Family Protein; Cation Efflux System Protein; Cation Efflux Permease; Cation Efflux System Permease; Cation Diffusion Facilitator Family Transporter; Heavy Metal Detoxification Protein; Cation Diffusion Facilitator; Co/Zn/Cd Efflux System Membrane Component; Cation Efflux Protein ; CDF Family Heavy Metal/H(+) Antiporter; Co/Zn/Cd Efflux Protein; RND Efflux System Protein; Co/Zn/Cd Efflux System Protein; Zinc Transporter; CDF Family Cobalt/Cadmium/Zinc Transporter

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MPGCSCGSSCAPQTSVSPRFRRALWVALVINALMFGVELVAGLHAGSVSLLADAVDFAGDAANYGISLAVLSLGLAWRSR
AALVKGFSMAGYGVFVLGKSVWAAFGGVPPEAMTMGAVALLALVANAGVALMLYAFREGDANMRSVWLCSRNDAIGNVAV
ILAAAGVFGTGQGWPDIVVAGVMAALALSSGLAVIRLARKELAEQAVPAGSAVLVTLGTPSRSDRAG

Sequences:

>Translated_227_residues
MPGCSCGSSCAPQTSVSPRFRRALWVALVINALMFGVELVAGLHAGSVSLLADAVDFAGDAANYGISLAVLSLGLAWRSR
AALVKGFSMAGYGVFVLGKSVWAAFGGVPPEAMTMGAVALLALVANAGVALMLYAFREGDANMRSVWLCSRNDAIGNVAV
ILAAAGVFGTGQGWPDIVVAGVMAALALSSGLAVIRLARKELAEQAVPAGSAVLVTLGTPSRSDRAG
>Mature_226_residues
PGCSCGSSCAPQTSVSPRFRRALWVALVINALMFGVELVAGLHAGSVSLLADAVDFAGDAANYGISLAVLSLGLAWRSRA
ALVKGFSMAGYGVFVLGKSVWAAFGGVPPEAMTMGAVALLALVANAGVALMLYAFREGDANMRSVWLCSRNDAIGNVAVI
LAAAGVFGTGQGWPDIVVAGVMAALALSSGLAVIRLARKELAEQAVPAGSAVLVTLGTPSRSDRAG

Specific function: Unknown

COG id: COG1230

COG function: function code P; Co/Zn/Cd efflux system component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22939; Mature: 22808

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGCSCGSSCAPQTSVSPRFRRALWVALVINALMFGVELVAGLHAGSVSLLADAVDFAGD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
AANYGISLAVLSLGLAWRSRAALVKGFSMAGYGVFVLGKSVWAAFGGVPPEAMTMGAVAL
CHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHCCCCHHHHHHHHHHH
LALVANAGVALMLYAFREGDANMRSVWLCSRNDAIGNVAVILAAAGVFGTGQGWPDIVVA
HHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH
GVMAALALSSGLAVIRLARKELAEQAVPAGSAVLVTLGTPSRSDRAG
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure 
PGCSCGSSCAPQTSVSPRFRRALWVALVINALMFGVELVAGLHAGSVSLLADAVDFAGD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
AANYGISLAVLSLGLAWRSRAALVKGFSMAGYGVFVLGKSVWAAFGGVPPEAMTMGAVAL
CHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHCCCCHHHHHHHHHHH
LALVANAGVALMLYAFREGDANMRSVWLCSRNDAIGNVAVILAAAGVFGTGQGWPDIVVA
HHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH
GVMAALALSSGLAVIRLARKELAEQAVPAGSAVLVTLGTPSRSDRAG
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA