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The map label for this gene is fis [C]

Identifier: 119899183

GI number: 119899183

Start: 3175942

End: 3176178

Strand: Direct

Name: fis [C]

Synonym: azo2893

Alternate gene names: 119899183

Gene position: 3175942-3176178 (Clockwise)

Preceding gene: 119899182

Following gene: 119899184

Centisome position: 72.58

GC content: 62.03

Gene sequence:

>237_bases
ATGAGCCGCAGCAACGAGATCGCCGACTCCGTCTTCCGGACCCTCGACCAGTATTTCCGCGATCTCGACGGCGAGAAGCC
GTCGGCGATCTACGACATGGTGATCCGCAATGTCGAGCGGCCGATGCTGGAGTTCGTGCTGCAGCAGGCCAAGGGTAACC
AGACCGTGGCCGCCGACATGCTCGGCATCAACCGCAACACCCTGCGCCGCAAGCTCACCGACTACGACCTGTTGTAA

Upstream 100 bases:

>100_bases
TAGACGAATTCTTCGGTCAGCTTGCCGAGGCGGACAGCCGTTTGAGTTATCAGACCGGCCAAGCCGATTTTGGCGACGAA
CAGCCTCAGGAACTTGCAGC

Downstream 100 bases:

>100_bases
GGCCGCGGCGCAGCGCGCCGCCTGTTTGCCCCGCGCCGGCCACCGGGCCGCGCTGCAGTTTCCGCCTTTCCCCGCTTTCC
ACCTTGTGCAGCCTCTGAAG

Product: putative fis-like DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MSRSNEIADSVFRTLDQYFRDLDGEKPSAIYDMVIRNVERPMLEFVLQQAKGNQTVAADMLGINRNTLRRKLTDYDLL

Sequences:

>Translated_78_residues
MSRSNEIADSVFRTLDQYFRDLDGEKPSAIYDMVIRNVERPMLEFVLQQAKGNQTVAADMLGINRNTLRRKLTDYDLL
>Mature_77_residues
SRSNEIADSVFRTLDQYFRDLDGEKPSAIYDMVIRNVERPMLEFVLQQAKGNQTVAADMLGINRNTLRRKLTDYDLL

Specific function: Activates Ribosomal RNA Transcription. Plays A Direct Role In Upstream Activation Of rRNA Promoters. Binds To A Recombinational Enhancer Sequence That Is Required To Stimulate Hin-Mediated DNA Inversion. Prevents Initiation Of DNA Replication From Oric.

COG id: COG2901

COG function: function code KL; Factor for inversion stimulation Fis, transcriptional activator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory fis family [H]

Homologues:

Organism=Escherichia coli, GI1789661, Length=69, Percent_Identity=47.8260869565217, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005412
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197 [H]

Pfam domain/function: PF02954 HTH_8 [H]

EC number: NA

Molecular weight: Translated: 9068; Mature: 8937

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSNEIADSVFRTLDQYFRDLDGEKPSAIYDMVIRNVERPMLEFVLQQAKGNQTVAADM
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LGINRNTLRRKLTDYDLL
HHCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRSNEIADSVFRTLDQYFRDLDGEKPSAIYDMVIRNVERPMLEFVLQQAKGNQTVAADM
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LGINRNTLRRKLTDYDLL
HHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]