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The map label for this gene is cc42

Identifier: 119899113

GI number: 119899113

Start: 3101743

End: 3102369

Strand: Direct

Name: cc42

Synonym: azo2823

Alternate gene names: NA

Gene position: 3101743-3102369 (Clockwise)

Preceding gene: 119899109

Following gene: 119899115

Centisome position: 70.88

GC content: 66.99

Gene sequence:

>627_bases
ATGATCAAGCGTTCCCTGCTGCTTTCGCTGCTGCTGGTCGCGGGCGGCCTCCAGGCCCAGGACCAGGCTCCGGACCTCGC
CAAGGCGAAACAGACCGCCGAGACGATCTGCGCCGGCTGTCACATGGCCGACGGCAATAGCCAGCTCCCCGCGAACCCCA
AGCTGGCGGGCCAGCATCCTGATTACCTCTACAAGCAACTGCACGATTTCAAGGCCTGGAACGGTGGCAAGGCCGCGCGC
GACAACGCCGTGATGAGCGCCATGGTGGCCGGCCTCGAAGAAGCCGACATGAAGGCGCTGGCCCAGCACTTCGGAAGCCA
GACCCAGAAGCCGGAGCCGGCGAAGAGCCTGGCCACCATCGAACTGGGTCAGAAGATCTGGCGTGCCGGCATCCCGGCCA
AGGGCGTGCCCGCCTGTGCCGCCTGCCACGGCCCCGCTGGTGCCGGCCTGCCCGCGCAGTACCCGCGTCTGTCCGGCCAG
TTCGCCGAATACACCGAAGCCCAGCTCAAGGGTTTCCGCGACGGCGTCCGTGCCAACGACCCCAACCGCATGATGCGCAT
GATCGCGCTCAAGATGACCGACCCCGAAATCAAGGCGGTGGCGGACTACGCGGCTGGCCTGCGCTAA

Upstream 100 bases:

>100_bases
CGGGGGCGGGGAAAAACCCTGATCGCGTCGCGCAAATCAAGCTTAGTGTTATAGAATAGCGCGTTTTGAGACATCCATTC
ACGGCTTTACCGAGGAAATC

Downstream 100 bases:

>100_bases
AGCGCTCCAGCCTCGAATCGAAAGGCGGCCTTCCGGCCGCCTTTTTCATTTCCGTCCCGCCCGTTCAGGCCTCCGGCGGG
ACGCGCCGGCTCAGCGCATC

Product: cytochrome C4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MIKRSLLLSLLLVAGGLQAQDQAPDLAKAKQTAETICAGCHMADGNSQLPANPKLAGQHPDYLYKQLHDFKAWNGGKAAR
DNAVMSAMVAGLEEADMKALAQHFGSQTQKPEPAKSLATIELGQKIWRAGIPAKGVPACAACHGPAGAGLPAQYPRLSGQ
FAEYTEAQLKGFRDGVRANDPNRMMRMIALKMTDPEIKAVADYAAGLR

Sequences:

>Translated_208_residues
MIKRSLLLSLLLVAGGLQAQDQAPDLAKAKQTAETICAGCHMADGNSQLPANPKLAGQHPDYLYKQLHDFKAWNGGKAAR
DNAVMSAMVAGLEEADMKALAQHFGSQTQKPEPAKSLATIELGQKIWRAGIPAKGVPACAACHGPAGAGLPAQYPRLSGQ
FAEYTEAQLKGFRDGVRANDPNRMMRMIALKMTDPEIKAVADYAAGLR
>Mature_208_residues
MIKRSLLLSLLLVAGGLQAQDQAPDLAKAKQTAETICAGCHMADGNSQLPANPKLAGQHPDYLYKQLHDFKAWNGGKAAR
DNAVMSAMVAGLEEADMKALAQHFGSQTQKPEPAKSLATIELGQKIWRAGIPAKGVPACAACHGPAGAGLPAQYPRLSGQ
FAEYTEAQLKGFRDGVRANDPNRMMRMIALKMTDPEIKAVADYAAGLR

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor in an anaerobic electron transport chain [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 22136; Mature: 22136

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRSLLLSLLLVAGGLQAQDQAPDLAKAKQTAETICAGCHMADGNSQLPANPKLAGQHP
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
DYLYKQLHDFKAWNGGKAARDNAVMSAMVAGLEEADMKALAQHFGSQTQKPEPAKSLATI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ELGQKIWRAGIPAKGVPACAACHGPAGAGLPAQYPRLSGQFAEYTEAQLKGFRDGVRAND
HHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PNRMMRMIALKMTDPEIKAVADYAAGLR
HHHHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKRSLLLSLLLVAGGLQAQDQAPDLAKAKQTAETICAGCHMADGNSQLPANPKLAGQHP
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
DYLYKQLHDFKAWNGGKAARDNAVMSAMVAGLEEADMKALAQHFGSQTQKPEPAKSLATI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ELGQKIWRAGIPAKGVPACAACHGPAGAGLPAQYPRLSGQFAEYTEAQLKGFRDGVRAND
HHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PNRMMRMIALKMTDPEIKAVADYAAGLR
HHHHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA