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The map label for this gene is yebA [H]

Identifier: 119899047

GI number: 119899047

Start: 3039381

End: 3040709

Strand: Direct

Name: yebA [H]

Synonym: azo2757

Alternate gene names: 119899047

Gene position: 3039381-3040709 (Clockwise)

Preceding gene: 119899044

Following gene: 119899051

Centisome position: 69.46

GC content: 66.89

Gene sequence:

>1329_bases
ATGCTGGTCAGGAAAAGCAGGATTCTAGCCGATCTCCCGGCCCATCTCCTCTCTCGTAAGCGCAGCTGGCTGGTCGCCGG
CGTCCTCGGCTCTTCGCTGCTCGGCGTGGTTGCGGCCACCGCGGTCGTGCCGGACGCGCCCGAGGCGATCGCCACCCAGG
CCGTCATCGAGCGACTCCCCAAACCACTCGCCAGCAGCACGGCGGTGGAGTCCGACCTGCCTTTCGTGCATGACGACAGG
GTCCAGCCCGGCGATACGGTGAACTCCATTTTCCGCCGGCTCGGTATCCGCGACGACGAAGCGCTGGCCTTCCTGCTCGA
GTCCGATGACGGCCGCAACGCGCTGCGTCAATTGCGCGCCGGGCGTTCGGTCACGGCCACGATCCGGTCCGACGGCGTGC
TGACCTCGCTCAGCCTGCCCACCGGAGCCAACGGCGACCGGATTACCCTCGAACGCGCGGACGAGGGCCTGCGCTTCCGC
ACCCAGGCAGCGGCCCTTTCCACCGTGGTGGAAATGCGTTCCGGCACCATCCGCCACTCGCTGTTCGCAACAACCGACGC
CATCGGCCTGCCCGACAGCATTGCAACGAAACTCGCCGACCTCTTCGGCACCGAGATCGACTTCCACACCGACCTGCGCA
AGGGCGACCGCTTCGGCGTCGTCTACGAGTCGATCTACGACCAGGGCGTGCCGGTCCGCACCGGGCGCATCCTGGCGGCG
GAATTCGTCAACCAGGGCAAGCGGCACGCGGTGGTCCTGTATGCGGGAGCAAGCGGCAAAGAGCAGTACTACACCGAAGA
CGGCCGCAGCCTCAAGCAGGCTTTCCTGCGCTCGCCGCTCGAATTCTCCCGCGTGACCTCCGGCTTTGGTCGCCGCCTCC
ACCCCATCCATAACAACTGGCGCAGCCACAACGGGGTGGACTTCGGCGCCCCCACCGGCACCCCGGTCAAGGCAACATCG
GACGGCGTGGTCGAATTCGTCGGCACCCAGCGGGGCTACGGCAACATCATCGTGCTGCGTCACCGCGGCAAGTACGACAC
CGCCTACGGGCACCTCAACGCGTTCGCCGCGCGCCTGCGCAAGGGCGCAACCGTCGAGCAAGGTGATGTCATCGGCTACG
TCGGCTCTACCGGCTGGGCCACCGGGCCGCACCTGCATTACGAAATCCGCGTGAACGACGTACCCCAGGACCCCCTCAAG
ATCGCACTCCCCACCGCCGAGCCGCTGTCGCCGCGGGAAGTCGCGTCTTTCAAGACGGCTACCGCCCCGGTTCTTCGGCA
ACTCGGGCTGCTTAACAACAACACGCAGATGGCGAGCGCGACCCAGTGA

Upstream 100 bases:

>100_bases
ATCGCGGCCTGGACGTCAGTCATCAAAATCTCTCCAATTCAAACGCGAATCACCCGCGATTTTTGATAGACTCGCGGGAG
TTTTTTGCCCGAAAAAGCCA

Downstream 100 bases:

>100_bases
CGCGCAGGAAGACCAAATGAAAACGGGGCGCCAGGCGCCCCGTTTTCATTGATGCCGCAAGATCGGACTCACGCGGAGAA
CGAGGAACCGCATCCGCACG

Product: metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MLVRKSRILADLPAHLLSRKRSWLVAGVLGSSLLGVVAATAVVPDAPEAIATQAVIERLPKPLASSTAVESDLPFVHDDR
VQPGDTVNSIFRRLGIRDDEALAFLLESDDGRNALRQLRAGRSVTATIRSDGVLTSLSLPTGANGDRITLERADEGLRFR
TQAAALSTVVEMRSGTIRHSLFATTDAIGLPDSIATKLADLFGTEIDFHTDLRKGDRFGVVYESIYDQGVPVRTGRILAA
EFVNQGKRHAVVLYAGASGKEQYYTEDGRSLKQAFLRSPLEFSRVTSGFGRRLHPIHNNWRSHNGVDFGAPTGTPVKATS
DGVVEFVGTQRGYGNIIVLRHRGKYDTAYGHLNAFAARLRKGATVEQGDVIGYVGSTGWATGPHLHYEIRVNDVPQDPLK
IALPTAEPLSPREVASFKTATAPVLRQLGLLNNNTQMASATQ

Sequences:

>Translated_442_residues
MLVRKSRILADLPAHLLSRKRSWLVAGVLGSSLLGVVAATAVVPDAPEAIATQAVIERLPKPLASSTAVESDLPFVHDDR
VQPGDTVNSIFRRLGIRDDEALAFLLESDDGRNALRQLRAGRSVTATIRSDGVLTSLSLPTGANGDRITLERADEGLRFR
TQAAALSTVVEMRSGTIRHSLFATTDAIGLPDSIATKLADLFGTEIDFHTDLRKGDRFGVVYESIYDQGVPVRTGRILAA
EFVNQGKRHAVVLYAGASGKEQYYTEDGRSLKQAFLRSPLEFSRVTSGFGRRLHPIHNNWRSHNGVDFGAPTGTPVKATS
DGVVEFVGTQRGYGNIIVLRHRGKYDTAYGHLNAFAARLRKGATVEQGDVIGYVGSTGWATGPHLHYEIRVNDVPQDPLK
IALPTAEPLSPREVASFKTATAPVLRQLGLLNNNTQMASATQ
>Mature_442_residues
MLVRKSRILADLPAHLLSRKRSWLVAGVLGSSLLGVVAATAVVPDAPEAIATQAVIERLPKPLASSTAVESDLPFVHDDR
VQPGDTVNSIFRRLGIRDDEALAFLLESDDGRNALRQLRAGRSVTATIRSDGVLTSLSLPTGANGDRITLERADEGLRFR
TQAAALSTVVEMRSGTIRHSLFATTDAIGLPDSIATKLADLFGTEIDFHTDLRKGDRFGVVYESIYDQGVPVRTGRILAA
EFVNQGKRHAVVLYAGASGKEQYYTEDGRSLKQAFLRSPLEFSRVTSGFGRRLHPIHNNWRSHNGVDFGAPTGTPVKATS
DGVVEFVGTQRGYGNIIVLRHRGKYDTAYGHLNAFAARLRKGATVEQGDVIGYVGSTGWATGPHLHYEIRVNDVPQDPLK
IALPTAEPLSPREVASFKTATAPVLRQLGLLNNNTQMASATQ

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=393, Percent_Identity=29.7709923664122, Blast_Score=138, Evalue=6e-34,
Organism=Escherichia coli, GI87082174, Length=116, Percent_Identity=37.0689655172414, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 47833; Mature: 47833

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVRKSRILADLPAHLLSRKRSWLVAGVLGSSLLGVVAATAVVPDAPEAIATQAVIERLP
CCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
KPLASSTAVESDLPFVHDDRVQPGDTVNSIFRRLGIRDDEALAFLLESDDGRNALRQLRA
CCHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHC
GRSVTATIRSDGVLTSLSLPTGANGDRITLERADEGLRFRTQAAALSTVVEMRSGTIRHS
CCCEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHCCCHHHH
LFATTDAIGLPDSIATKLADLFGTEIDFHTDLRKGDRFGVVYESIYDQGVPVRTGRILAA
HHHHCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHH
EFVNQGKRHAVVLYAGASGKEQYYTEDGRSLKQAFLRSPLEFSRVTSGFGRRLHPIHNNW
HHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCC
RSHNGVDFGAPTGTPVKATSDGVVEFVGTQRGYGNIIVLRHRGKYDTAYGHLNAFAARLR
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
KGATVEQGDVIGYVGSTGWATGPHLHYEIRVNDVPQDPLKIALPTAEPLSPREVASFKTA
CCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHH
TAPVLRQLGLLNNNTQMASATQ
HHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLVRKSRILADLPAHLLSRKRSWLVAGVLGSSLLGVVAATAVVPDAPEAIATQAVIERLP
CCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
KPLASSTAVESDLPFVHDDRVQPGDTVNSIFRRLGIRDDEALAFLLESDDGRNALRQLRA
CCHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHC
GRSVTATIRSDGVLTSLSLPTGANGDRITLERADEGLRFRTQAAALSTVVEMRSGTIRHS
CCCEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHCCCHHHH
LFATTDAIGLPDSIATKLADLFGTEIDFHTDLRKGDRFGVVYESIYDQGVPVRTGRILAA
HHHHCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHH
EFVNQGKRHAVVLYAGASGKEQYYTEDGRSLKQAFLRSPLEFSRVTSGFGRRLHPIHNNW
HHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCC
RSHNGVDFGAPTGTPVKATSDGVVEFVGTQRGYGNIIVLRHRGKYDTAYGHLNAFAARLR
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
KGATVEQGDVIGYVGSTGWATGPHLHYEIRVNDVPQDPLKIALPTAEPLSPREVASFKTA
CCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHH
TAPVLRQLGLLNNNTQMASATQ
HHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]