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The map label for this gene is flgC [H]

Identifier: 119899029

GI number: 119899029

Start: 3022403

End: 3022843

Strand: Reverse

Name: flgC [H]

Synonym: azo2739

Alternate gene names: 119899029

Gene position: 3022843-3022403 (Counterclockwise)

Preceding gene: 119899030

Following gene: 119899028

Centisome position: 69.08

GC content: 65.53

Gene sequence:

>441_bases
ATGAGCATGCTCAACGTCTTCCAGATCGCCGGTTCGGCGCTCAACGCGCAGTCGCTGCGCCTGAATACCACCGCCTCCAA
CCTGGCCAATGCCGACAGCGTGATCGCCGAGGACGGCCAGCCCTACCGCGCCAAGCAGGTGGTGTTTGCCGCCAAGCCCG
TGGGCGCCACGCCGCCGGTGGGCGGCGTGCGCGACAAGGGCGCCGCGGCCTCGGTGGGCGTGCAGGTTACCCAGGTGGTG
GAGAGCGCGGCGCCGATGCGGCTGGTGTACGAGCCGCACAACCCCGCGGCGAACGCCGAGGGCTATGTCGAGATGCCCAA
CGTGAATGTCGTCGAAGAGATGGTGAACATGATCTCGGCATCGCGCTCGTACCAGAACAACGCCGAAGTGATGAACACGG
CACAGACCTTGCTGCAGCGGACCTTGCAGATCGGTCAATAA

Upstream 100 bases:

>100_bases
CGCCATCCATTACGAGGCCAGCATCACCTTCATCAATGGCCTGCTACGCGGCATGCAAACCGCGATCAGCGGCCAGTAAG
GCTTAGGGGAGTAGGCGCTC

Downstream 100 bases:

>100_bases
GCACGACCGGCAACCGTTGCCGCCGCCGGCAGGAGAAAGAAATGAGCACCGTGACATCCGCAACGCAGACCGCGCAGGAC
ATCCTCGCCAGTCTCGCGCG

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSMLNVFQIAGSALNAQSLRLNTTASNLANADSVIAEDGQPYRAKQVVFAAKPVGATPPVGGVRDKGAAASVGVQVTQVV
ESAAPMRLVYEPHNPAANAEGYVEMPNVNVVEEMVNMISASRSYQNNAEVMNTAQTLLQRTLQIGQ

Sequences:

>Translated_146_residues
MSMLNVFQIAGSALNAQSLRLNTTASNLANADSVIAEDGQPYRAKQVVFAAKPVGATPPVGGVRDKGAAASVGVQVTQVV
ESAAPMRLVYEPHNPAANAEGYVEMPNVNVVEEMVNMISASRSYQNNAEVMNTAQTLLQRTLQIGQ
>Mature_145_residues
SMLNVFQIAGSALNAQSLRLNTTASNLANADSVIAEDGQPYRAKQVVFAAKPVGATPPVGGVRDKGAAASVGVQVTQVVE
SAAPMRLVYEPHNPAANAEGYVEMPNVNVVEEMVNMISASRSYQNNAEVMNTAQTLLQRTLQIGQ

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=146, Percent_Identity=60.958904109589, Blast_Score=168, Evalue=1e-43,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15401; Mature: 15269

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMLNVFQIAGSALNAQSLRLNTTASNLANADSVIAEDGQPYRAKQVVFAAKPVGATPPV
CCHHHHHHHHCCCCCCCEEEEECCHHHHCCCCHHHHCCCCCCCHHEEEEEECCCCCCCCC
GGVRDKGAAASVGVQVTQVVESAAPMRLVYEPHNPAANAEGYVEMPNVNVVEEMVNMISA
CCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHH
SRSYQNNAEVMNTAQTLLQRTLQIGQ
HCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SMLNVFQIAGSALNAQSLRLNTTASNLANADSVIAEDGQPYRAKQVVFAAKPVGATPPV
CHHHHHHHHCCCCCCCEEEEECCHHHHCCCCHHHHCCCCCCCHHEEEEEECCCCCCCCC
GGVRDKGAAASVGVQVTQVVESAAPMRLVYEPHNPAANAEGYVEMPNVNVVEEMVNMISA
CCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHH
SRSYQNNAEVMNTAQTLLQRTLQIGQ
HCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]