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The map label for this gene is fliR [H]

Identifier: 119899018

GI number: 119899018

Start: 3010935

End: 3011747

Strand: Direct

Name: fliR [H]

Synonym: azo2728

Alternate gene names: 119899018

Gene position: 3010935-3011747 (Clockwise)

Preceding gene: 119899017

Following gene: 119899031

Centisome position: 68.81

GC content: 67.77

Gene sequence:

>813_bases
ATGATCAGCGTCACTTCGGCCCAGCTCGACGCCTGGCTCGCGGCGCTGATGTTTCCGCTCGCGCGCCTGCTGGGGCTTTT
TGCCACCGCGCCGGTGTTCTCCAACCGCGCGATTCCGGTCCGCATCCGGCTGACGATGGCGCTGGGCATCGCGCTTGCGC
TGTTGCCGGCCCTGCCCGCGATGCCGCAGACGCCGCCGGGCGGCGGCATCGGCCTGCTGGTCATGGTGCAGCAGATGTTC
ATCGGCATCGCGATCGGCTTCATGATCCGCATCGTGTTCGCGGCGATCGACATGGCCGGTTCGCTGATCGGGATGCAGAT
GGGCCTGTCGTTCGCGGTGTTCTTCGACCCCGACGCCGGCGGTCAGACCGCGGTGCTGTCCGATTTCCTCAGCCTCGTCG
CCACGCTGCTGTTCCTGTCCATCAACGGCCACCTGATGCTCGTGGCAGCGCTGATACGCAGCTTCGAATGGCTGCCGATC
GGGCTCAACGTGGTCAGCGCGTCGGGCTGGGCCTACATCGCGCGCGCCGGCGCAGCGGTGTTTGCCACCGGCCTGCTACT
GTCGCTGCCCATCGTCGCGGTGCTGCTGGTGGCCAACATCGCGCTCGGCATCCTCACCCGCGCCGCGCCCCAGCTCAACC
TGTTCGCCATCGGTTTTCCGGTCACGCTGGCGATGGGCTTCATGGGGCTGATCCTGATCATGACCAACTTCGGCCCGGTG
GTGGTCAGCCTGTTCGAACACGGCTTCGACACCATCTCGGCGATGCTCGAAGCGCTCGCGCCGCTGCCCCCGGCGCCCGC
GCCGCCACGCTGA

Upstream 100 bases:

>100_bases
GCGGGGCCGTGGATGATCACGATGCTCACCGACTTCATGCGCCGGCTGTTCGAATCCATTCCGACGATGATCGGATGAGC
GTGGCGCGCCGCCGCTCCGC

Downstream 100 bases:

>100_bases
ACTTCAGAGCGACGGGAACTGGCGCGACTTCACCAGGCGGATTTCGCCGCTCGCGGTGCGGCGCGCGAACGGGCGTTCGT
TGCTGATGCCCTCTTCGTAA

Product: flagellar biosynthesis protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MISVTSAQLDAWLAALMFPLARLLGLFATAPVFSNRAIPVRIRLTMALGIALALLPALPAMPQTPPGGGIGLLVMVQQMF
IGIAIGFMIRIVFAAIDMAGSLIGMQMGLSFAVFFDPDAGGQTAVLSDFLSLVATLLFLSINGHLMLVAALIRSFEWLPI
GLNVVSASGWAYIARAGAAVFATGLLLSLPIVAVLLVANIALGILTRAAPQLNLFAIGFPVTLAMGFMGLILIMTNFGPV
VVSLFEHGFDTISAMLEALAPLPPAPAPPR

Sequences:

>Translated_270_residues
MISVTSAQLDAWLAALMFPLARLLGLFATAPVFSNRAIPVRIRLTMALGIALALLPALPAMPQTPPGGGIGLLVMVQQMF
IGIAIGFMIRIVFAAIDMAGSLIGMQMGLSFAVFFDPDAGGQTAVLSDFLSLVATLLFLSINGHLMLVAALIRSFEWLPI
GLNVVSASGWAYIARAGAAVFATGLLLSLPIVAVLLVANIALGILTRAAPQLNLFAIGFPVTLAMGFMGLILIMTNFGPV
VVSLFEHGFDTISAMLEALAPLPPAPAPPR
>Mature_270_residues
MISVTSAQLDAWLAALMFPLARLLGLFATAPVFSNRAIPVRIRLTMALGIALALLPALPAMPQTPPGGGIGLLVMVQQMF
IGIAIGFMIRIVFAAIDMAGSLIGMQMGLSFAVFFDPDAGGQTAVLSDFLSLVATLLFLSINGHLMLVAALIRSFEWLPI
GLNVVSASGWAYIARAGAAVFATGLLLSLPIVAVLLVANIALGILTRAAPQLNLFAIGFPVTLAMGFMGLILIMTNFGPV
VVSLFEHGFDTISAMLEALAPLPPAPAPPR

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

Organism=Escherichia coli, GI1788261, Length=264, Percent_Identity=42.0454545454545, Blast_Score=170, Evalue=1e-43,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 28150; Mature: 28150

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVTSAQLDAWLAALMFPLARLLGLFATAPVFSNRAIPVRIRLTMALGIALALLPALPA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEHHHHHHHHHHHHHHHCCC
MPQTPPGGGIGLLVMVQQMFIGIAIGFMIRIVFAAIDMAGSLIGMQMGLSFAVFFDPDAG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
GQTAVLSDFLSLVATLLFLSINGHLMLVAALIRSFEWLPIGLNVVSASGWAYIARAGAAV
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCEEEECCCHHHHHHHHHHH
FATGLLLSLPIVAVLLVANIALGILTRAAPQLNLFAIGFPVTLAMGFMGLILIMTNFGPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHH
VVSLFEHGFDTISAMLEALAPLPPAPAPPR
HHHHHHHCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MISVTSAQLDAWLAALMFPLARLLGLFATAPVFSNRAIPVRIRLTMALGIALALLPALPA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEHHHHHHHHHHHHHHHCCC
MPQTPPGGGIGLLVMVQQMFIGIAIGFMIRIVFAAIDMAGSLIGMQMGLSFAVFFDPDAG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
GQTAVLSDFLSLVATLLFLSINGHLMLVAALIRSFEWLPIGLNVVSASGWAYIARAGAAV
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCEEEECCCHHHHHHHHHHH
FATGLLLSLPIVAVLLVANIALGILTRAAPQLNLFAIGFPVTLAMGFMGLILIMTNFGPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHH
VVSLFEHGFDTISAMLEALAPLPPAPAPPR
HHHHHHHCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8412685; 7934865 [H]