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The map label for this gene is fliF [H]

Identifier: 119899006

GI number: 119899006

Start: 3000514

End: 3002202

Strand: Direct

Name: fliF [H]

Synonym: azo2716

Alternate gene names: 119899006

Gene position: 3000514-3002202 (Clockwise)

Preceding gene: 119899002

Following gene: 119899007

Centisome position: 68.57

GC content: 68.27

Gene sequence:

>1689_bases
ATGGCCACCGCAGACAACATCGCCGCCGCCGTACCGAACGCCGCGCTTGCCGCGCGTCTGCAGCAGGTGGTGCAGAACAT
CAACGCGCTGTCGATGCGGCAGAAGATCGCGGGCGCGGCCGCGCTCGCGCTCGCCGTCGCGCTGATCGTGGGCGCGCTGA
TGTGGAACCGCCAGCCCGACTACGGCGTGCTGTTCTCCAATCTGGACGAACGCGACGGCGGCCAGGTGATCGCGGCCCTG
CAGCAGCAGAACGTGCCCTACCGCATGTCGCCCAACGGCCTGTCCATCCTGGTGCCGCAGGAACAGGTGCACGAACTGCG
GCTGCGGCTGGCTGCCGCGGGCCTGCCGCGCGGGGGCCTGGTCGGCTTCGAGCTGATGGACACCCAGAAGCTGGGCGTGT
CGCAGTTCAACGAGCAGGTGAACTACCAACGCGCGCTCGAAGGCGAGCTGTCGCGCACCATCCAGTCGATCGCCGCGGTG
GCGGCGGCGCGGGTGCATCTGGCGATGCCCAAGCAGACCGCTTTCCTGCGCGACGACCAGAAGCCCACCGCTTCGGTGAT
GGTGACGCTGCGGCCCGGCCGCGTGCTCGACGCCAACCAGGTCGCCGGCATCGTGCATCTGGTGTCGTCCAGCGTGCCGC
GCATGGTGGAATCCGGCGTCAACATCATCGACCAGAACGGCGAGCTGCTGACCACCAAGAACGACCCGCTGCGCCAGACC
GGGCTGGACGCCACCCAGCTCGAATACGTGAAGGAGGTCGAAGCGGGCTTCATCCGCCGCATCGAGAACATCCTGCAGCC
CATGGTGGGCAAGAACAATTTCCGCGCCCAGGTGGCGGCGGACGTGGACTTCAACCAGGTCGAGCAGACCGCGGAAACCT
TCAAGCCCAATCCCTCGCCGGACCAGGCCATCCGCAGCCAGCAGACCACCGAGGAGACCAACCGCCAGCCGGGTCCGCAA
GGCGTGCCGGGCGCGCTCAGCAACCAGCCGCCGGTGCCGGCCACCGCGCCGATCACCACGCCGCCGGTGGGCCCCAACCA
GGCCGGCGCGGCGCAGACCGGCACCACCAGCCGCAGCGCGGTGCTCAACTACGAGGTCGACCGCACCATCCAGCACGTCA
AACAGTCGCTCGGCCAGTTGAAGCGGCTGTCGGTGGCGGTGGTGGTGAACCATCGCACCGAAACCCTGCCCAACGGACAG
ACCCAGACGGTGCCGCTGACCGACGAGGAAGTCGCCCGCATCAACAACCTGGTGCGCGAGGCGGTGGGCTACAACCCCGC
GCGCGGCGACACCATCAACGTCGCCTCCAGCCCGTTCGCCGGCATCGGCCCCGAACCCGCGGTGCCGCTGTGGAAAGACC
CGGAGATGATCGAACTGGGCAAGGAGGGCTTCAAGTACCTGCTGGTGGCGCTGGCGGTGCTGTTCGCCTACTTTGCGATC
ATCCGGCCGCTGATGCGCACGGTGATGCCGCCGCCGCCCGAACCCGAGGTGGCCGAAGCGGGCGAACCCGGCGAACCGGG
CTTCGAAGGAGAAGAAGACGTGGAAGTCACGCTGTCGGGCGCGGCCCAGGCCAACACCTACGAAGCCAAGCTGGCGCGGG
CGCGCGAGCTGGCGAAGGAAGACCCGAAGATGGTCGCCAACCTCATCCGTGAATGGATGGGCCTCAACGAAGAGGGCCGC
AAGTCATGA

Upstream 100 bases:

>100_bases
GCAAACAGGCGGCAAAAAATGCCGCTTTTCGTGCGACCGCGCTTGCCGCCCGCGCCCGACAATGCCGCCATCCGAAAAAG
GGTTTGCCTCAGGGGTTGCA

Downstream 100 bases:

>100_bases
CCCCCGAAGAAGGACTGGAGAATTCCGCCCTGCTGCTGCTGACGCTGGGCGCGGACGAAGCCTCGGAGGTGCTCAAGCAC
CTGGGCCCGCGCGAAGTGCA

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MATADNIAAAVPNAALAARLQQVVQNINALSMRQKIAGAAALALAVALIVGALMWNRQPDYGVLFSNLDERDGGQVIAAL
QQQNVPYRMSPNGLSILVPQEQVHELRLRLAAAGLPRGGLVGFELMDTQKLGVSQFNEQVNYQRALEGELSRTIQSIAAV
AAARVHLAMPKQTAFLRDDQKPTASVMVTLRPGRVLDANQVAGIVHLVSSSVPRMVESGVNIIDQNGELLTTKNDPLRQT
GLDATQLEYVKEVEAGFIRRIENILQPMVGKNNFRAQVAADVDFNQVEQTAETFKPNPSPDQAIRSQQTTEETNRQPGPQ
GVPGALSNQPPVPATAPITTPPVGPNQAGAAQTGTTSRSAVLNYEVDRTIQHVKQSLGQLKRLSVAVVVNHRTETLPNGQ
TQTVPLTDEEVARINNLVREAVGYNPARGDTINVASSPFAGIGPEPAVPLWKDPEMIELGKEGFKYLLVALAVLFAYFAI
IRPLMRTVMPPPPEPEVAEAGEPGEPGFEGEEDVEVTLSGAAQANTYEAKLARARELAKEDPKMVANLIREWMGLNEEGR
KS

Sequences:

>Translated_562_residues
MATADNIAAAVPNAALAARLQQVVQNINALSMRQKIAGAAALALAVALIVGALMWNRQPDYGVLFSNLDERDGGQVIAAL
QQQNVPYRMSPNGLSILVPQEQVHELRLRLAAAGLPRGGLVGFELMDTQKLGVSQFNEQVNYQRALEGELSRTIQSIAAV
AAARVHLAMPKQTAFLRDDQKPTASVMVTLRPGRVLDANQVAGIVHLVSSSVPRMVESGVNIIDQNGELLTTKNDPLRQT
GLDATQLEYVKEVEAGFIRRIENILQPMVGKNNFRAQVAADVDFNQVEQTAETFKPNPSPDQAIRSQQTTEETNRQPGPQ
GVPGALSNQPPVPATAPITTPPVGPNQAGAAQTGTTSRSAVLNYEVDRTIQHVKQSLGQLKRLSVAVVVNHRTETLPNGQ
TQTVPLTDEEVARINNLVREAVGYNPARGDTINVASSPFAGIGPEPAVPLWKDPEMIELGKEGFKYLLVALAVLFAYFAI
IRPLMRTVMPPPPEPEVAEAGEPGEPGFEGEEDVEVTLSGAAQANTYEAKLARARELAKEDPKMVANLIREWMGLNEEGR
KS
>Mature_561_residues
ATADNIAAAVPNAALAARLQQVVQNINALSMRQKIAGAAALALAVALIVGALMWNRQPDYGVLFSNLDERDGGQVIAALQ
QQNVPYRMSPNGLSILVPQEQVHELRLRLAAAGLPRGGLVGFELMDTQKLGVSQFNEQVNYQRALEGELSRTIQSIAAVA
AARVHLAMPKQTAFLRDDQKPTASVMVTLRPGRVLDANQVAGIVHLVSSSVPRMVESGVNIIDQNGELLTTKNDPLRQTG
LDATQLEYVKEVEAGFIRRIENILQPMVGKNNFRAQVAADVDFNQVEQTAETFKPNPSPDQAIRSQQTTEETNRQPGPQG
VPGALSNQPPVPATAPITTPPVGPNQAGAAQTGTTSRSAVLNYEVDRTIQHVKQSLGQLKRLSVAVVVNHRTETLPNGQT
QTVPLTDEEVARINNLVREAVGYNPARGDTINVASSPFAGIGPEPAVPLWKDPEMIELGKEGFKYLLVALAVLFAYFAII
RPLMRTVMPPPPEPEVAEAGEPGEPGFEGEEDVEVTLSGAAQANTYEAKLARARELAKEDPKMVANLIREWMGLNEEGRK
S

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=542, Percent_Identity=45.9409594095941, Blast_Score=409, Evalue=1e-115,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 60600; Mature: 60469

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATADNIAAAVPNAALAARLQQVVQNINALSMRQKIAGAAALALAVALIVGALMWNRQPD
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YGVLFSNLDERDGGQVIAALQQQNVPYRMSPNGLSILVPQEQVHELRLRLAAAGLPRGGL
CCHHCCCCCCCCCCHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHCCCCCCCE
VGFELMDTQKLGVSQFNEQVNYQRALEGELSRTIQSIAAVAAARVHLAMPKQTAFLRDDQ
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
KPTASVMVTLRPGRVLDANQVAGIVHLVSSSVPRMVESGVNIIDQNGELLTTKNDPLRQT
CCCEEEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEECCCCCHHHH
GLDATQLEYVKEVEAGFIRRIENILQPMVGKNNFRAQVAADVDFNQVEQTAETFKPNPSP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCH
DQAIRSQQTTEETNRQPGPQGVPGALSNQPPVPATAPITTPPVGPNQAGAAQTGTTSRSA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VLNYEVDRTIQHVKQSLGQLKRLSVAVVVNHRTETLPNGQTQTVPLTDEEVARINNLVRE
EEECHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHH
AVGYNPARGDTINVASSPFAGIGPEPAVPLWKDPEMIELGKEGFKYLLVALAVLFAYFAI
HHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IRPLMRTVMPPPPEPEVAEAGEPGEPGFEGEEDVEVTLSGAAQANTYEAKLARARELAKE
HHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC
DPKMVANLIREWMGLNEEGRKS
CHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ATADNIAAAVPNAALAARLQQVVQNINALSMRQKIAGAAALALAVALIVGALMWNRQPD
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YGVLFSNLDERDGGQVIAALQQQNVPYRMSPNGLSILVPQEQVHELRLRLAAAGLPRGGL
CCHHCCCCCCCCCCHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHCCCCCCCE
VGFELMDTQKLGVSQFNEQVNYQRALEGELSRTIQSIAAVAAARVHLAMPKQTAFLRDDQ
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
KPTASVMVTLRPGRVLDANQVAGIVHLVSSSVPRMVESGVNIIDQNGELLTTKNDPLRQT
CCCEEEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEECCCCCHHHH
GLDATQLEYVKEVEAGFIRRIENILQPMVGKNNFRAQVAADVDFNQVEQTAETFKPNPSP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCH
DQAIRSQQTTEETNRQPGPQGVPGALSNQPPVPATAPITTPPVGPNQAGAAQTGTTSRSA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VLNYEVDRTIQHVKQSLGQLKRLSVAVVVNHRTETLPNGQTQTVPLTDEEVARINNLVRE
EEECHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHH
AVGYNPARGDTINVASSPFAGIGPEPAVPLWKDPEMIELGKEGFKYLLVALAVLFAYFAI
HHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IRPLMRTVMPPPPEPEVAEAGEPGEPGFEGEEDVEVTLSGAAQANTYEAKLARARELAKE
HHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC
DPKMVANLIREWMGLNEEGRKS
CHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 1551848; 8224881 [H]