| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is 119898993
Identifier: 119898993
GI number: 119898993
Start: 2984043
End: 2986367
Strand: Reverse
Name: 119898993
Synonym: azo2703
Alternate gene names: NA
Gene position: 2986367-2984043 (Counterclockwise)
Preceding gene: 119899003
Following gene: 119898979
Centisome position: 68.24
GC content: 70.97
Gene sequence:
>2325_bases ATGAATCCGATGTCCCCTTTGCCCCCGGCCGACATGCAGCGCCTCCAGGAGGCTGTCGAACATTTCCGCGCCGGCCGCGC GGAAGCCGCGCTTCCCCTCGCCCGTGCGCTGGCGGGGCGCCACCCTGGCGTCGGCGTGGTGTCCAAGCTGCTCGGCAGCG TGCTGCACGCGCTGGGCGAGCACGCCGAAGCGGCTGCGGTGCTAGGGCGCGCCGTGGCCGAACTGCCGGGTGACGCCCAG GCCCATTCCAACCTCGGCAACGCGCTCGCGGTACTGGGCCGCATCGACGAAGCCATCGATGCCCATCGCCGCGCGATCCG CCTGCAGCCGGAGCAAGCCACCCCCCACTACAACCTGGGCTGCGTGCTGCTGCAGGCGGGGCGCAGAAGTGAGGCCGCCG ATGCCTGGGCCGAGGCGCAGACGCGCGCGCCGGACGATGCGGAACTGGCCGCGCTCTACCGCGACTTGCTGCTTGAGTTG GGAGATAACGGCAGGCTGATGGATTTCTGCAGGGCGCAGATTGCGCGCGGACGGGAGGATGGCGGCGTTCTTGCCCTGGC GGGCGCGTTGGCGTTGGCCGACCCCGCGGGCGACATCGACGAAGCGGAGCGCTGGCTGGTTGCCGCGCTGGGTCTGGCGC CCGACGACGCTTCCAGCTGGTCGAATCTGTGCGTGTTGCGCTGCCGGCAAGGACGCTTCGCCGACGCGGTCGACGCCGGC CGGCAGGCGGTGGCCGCAGCGCCGGAATGGGCGCAGGGACACAGCAACCTGGCCCTCGCGTTGCGCGAAGCGGGTGCGCG CGAAGAGGCCAGAACCCACTGCCTGGAAGCCTTGCAGCTGGACGGGGAGTGCGTGGATGCCTACTACAACCTCGGCTGCA TTGCCGCCGATCTCGGCGAGCACGAGTTGGCGCGGGAGGCTGGCATCGAAGCAGTGAAGCGCATGCCGCGGCCGGGCTGG CTGCTGCAGGCTGCGCACGCCTGCCGTTATGTGGCGGACTGGGAGGCTGCCGAACTGCTGGAAGCCGAACTTGCGCGGGT GTGCGACGACCCAGCGGGGCTGCCGACCGGGGGCGACGCGCTGGCACCGTTTGCCTTTCTCACCGTGCCGGGTACGGATG CCGCCGCCCAGGCAGCGGTTGCACGCGCTTTTGCCGCCCAGTTCGAGCGTGTGCCGGCGGTGCGGCGCGCTGCGTCCGCG CCGGGCGCGCGTCCGTTGCGGGTCGGTCTGCTGTCGGCCGATTTCCGCGATCACGCGACCGCGCACCTGATGACCGGGGT GCTCGAAGCGATCGACCCCGGCCGTGTCCGGCTGATCGCTTACGACTACGGTCCGCAGCATGACGACGACTATCGCCGCC GGCTGCAGCGGGCCATCCCCAAATGGGTGATGCTGGCGGGCCTGTCCGATGCGGAGGCCGCGGGCAGGATTGCCGCGGAT GCCGTCGATATCGTGATCGACCTCAAGGGCTGGACCCAGGGTTTTCGCGCACCCATCCTGGCGTATCGGCCGGTGCCGCT GCAGATGCAGTGGCTCGGCTTCCCGGGGACCATGGGCGCAGCCTGGCTGGACTACATCATCGCGGACGGCATTGTCGTGC CGGCAGGCGCGGAGGCCGGCTACAGCGAGCGCGTCCTGCGCCTGCCGGGCTGCTACCAGCCCAACGACGGCCAGCGCCCG CCGGTGACGCCGCTGTCGCGAGCGGAGGCGGGGCTGCCCGACGATGCCCTGGTGCTGGCCGCTTTCCACCAGCACTACAA GATCACGCGGGCAAGCTTTGCGCTGTGGATGCGCTTGCTCCGCGGGTTGCCCGATGCGCTGCTGTGGTTGCTTGAAGGAG CGCCTTCGGCGATGGCCCGGCTGTCACAGGAAGCGCGGGCGCACGGCGTTGATCCCGCACGCCTGTGCTGGGCGCCGCGG GTGCCGGTGGTGCATCACCTGAACCGTCTCGCGGTGGCGGACATCGCGCTCGACGCGTTTCCGGTCAACGCCCACACCAC GGCCAGCGACGCCCTGTGGGCAGGGGTGCCGCAAGTGGCACGGCGCGGCGACACTTTTGTCTCGCGCGTTTCGGCCAGCA TCCTTGACGCAGCGGGTTTGCCCGAGCTGATCGCGGCTGACGACGCCAGCTACGAGGCCCTGGTGCTGGCGCTGGGTACC GACGCGGGACGGCGGCAGGCCGTCCGCCAACGCGTCGCCGATGCCGTCAAACATGCCGGGCTGTTCAACAGCGCGGCCTT TGCCCGCCACCTCGAGGACGCGCTGGAGTGGGCATGGACGCGGCACTGCGCGGGGCTGCCGCCGGCGTCCACGCCCGTAC CCTGA
Upstream 100 bases:
>100_bases GGAAAGCTTTAGGCATTTTTTGCCGGTTGCGGCGAAATCCTTTCCGCCCCCCGCGCCGCGCCCGCCGCGGAGCGCGTTCC GCCGCAGGCGGGTCACCCAT
Downstream 100 bases:
>100_bases TCAGCGCGCCCAGGCCGCCTGCCATTCGTCGAGGTGGTCCTCCAGCATCCAGTGCTGGCGAACGTGGGCCTGCAGCGCGG CGCCTTCGCGGCGGGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; SPINDLY Family O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_1 Repeat-Containing Protein; Methyltransferase Type; TPR Repeat Protein; TPR Domain Protein; FkbM Family Methyltransferase; Glycosyl Transferase Family Protein; Tetratricopeptide Repeat-Containing Protein; SPY Protein; Glycosyltransferase TPR Domain Protein; Tpr Repeat-Containing Protein; Porphyrin Biosynthesis Protein; Transferase; Tetratricopeptide Repeat Family Protein; Sulfotransferase; TPR Domain/SEC-C Motif Domain Protein; TPR Repeat; O-Linked N-Acetylglucosamine TransferaNDLY Family; Tetratricopeptide Repeat Protein; O-Linked Acetylglucosamine Transferase; Glycosyltransferase TPR Domain-Containing Protein; Methyltransferase Regulatory Domain; Tetratricopeptide Domain Protein; TPR Repeat Domain-Containing Protein; TPR Repeat-Containing Glycosyl Transferase; O-Linked GLCNAC Transferase; Glycosyl Transferase TPR Repeat Protein
Number of amino acids: Translated: 774; Mature: 774
Protein sequence:
>774_residues MNPMSPLPPADMQRLQEAVEHFRAGRAEAALPLARALAGRHPGVGVVSKLLGSVLHALGEHAEAAAVLGRAVAELPGDAQ AHSNLGNALAVLGRIDEAIDAHRRAIRLQPEQATPHYNLGCVLLQAGRRSEAADAWAEAQTRAPDDAELAALYRDLLLEL GDNGRLMDFCRAQIARGREDGGVLALAGALALADPAGDIDEAERWLVAALGLAPDDASSWSNLCVLRCRQGRFADAVDAG RQAVAAAPEWAQGHSNLALALREAGAREEARTHCLEALQLDGECVDAYYNLGCIAADLGEHELAREAGIEAVKRMPRPGW LLQAAHACRYVADWEAAELLEAELARVCDDPAGLPTGGDALAPFAFLTVPGTDAAAQAAVARAFAAQFERVPAVRRAASA PGARPLRVGLLSADFRDHATAHLMTGVLEAIDPGRVRLIAYDYGPQHDDDYRRRLQRAIPKWVMLAGLSDAEAAGRIAAD AVDIVIDLKGWTQGFRAPILAYRPVPLQMQWLGFPGTMGAAWLDYIIADGIVVPAGAEAGYSERVLRLPGCYQPNDGQRP PVTPLSRAEAGLPDDALVLAAFHQHYKITRASFALWMRLLRGLPDALLWLLEGAPSAMARLSQEARAHGVDPARLCWAPR VPVVHHLNRLAVADIALDAFPVNAHTTASDALWAGVPQVARRGDTFVSRVSASILDAAGLPELIAADDASYEALVLALGT DAGRRQAVRQRVADAVKHAGLFNSAAFARHLEDALEWAWTRHCAGLPPASTPVP
Sequences:
>Translated_774_residues MNPMSPLPPADMQRLQEAVEHFRAGRAEAALPLARALAGRHPGVGVVSKLLGSVLHALGEHAEAAAVLGRAVAELPGDAQ AHSNLGNALAVLGRIDEAIDAHRRAIRLQPEQATPHYNLGCVLLQAGRRSEAADAWAEAQTRAPDDAELAALYRDLLLEL GDNGRLMDFCRAQIARGREDGGVLALAGALALADPAGDIDEAERWLVAALGLAPDDASSWSNLCVLRCRQGRFADAVDAG RQAVAAAPEWAQGHSNLALALREAGAREEARTHCLEALQLDGECVDAYYNLGCIAADLGEHELAREAGIEAVKRMPRPGW LLQAAHACRYVADWEAAELLEAELARVCDDPAGLPTGGDALAPFAFLTVPGTDAAAQAAVARAFAAQFERVPAVRRAASA PGARPLRVGLLSADFRDHATAHLMTGVLEAIDPGRVRLIAYDYGPQHDDDYRRRLQRAIPKWVMLAGLSDAEAAGRIAAD AVDIVIDLKGWTQGFRAPILAYRPVPLQMQWLGFPGTMGAAWLDYIIADGIVVPAGAEAGYSERVLRLPGCYQPNDGQRP PVTPLSRAEAGLPDDALVLAAFHQHYKITRASFALWMRLLRGLPDALLWLLEGAPSAMARLSQEARAHGVDPARLCWAPR VPVVHHLNRLAVADIALDAFPVNAHTTASDALWAGVPQVARRGDTFVSRVSASILDAAGLPELIAADDASYEALVLALGT DAGRRQAVRQRVADAVKHAGLFNSAAFARHLEDALEWAWTRHCAGLPPASTPVP >Mature_774_residues MNPMSPLPPADMQRLQEAVEHFRAGRAEAALPLARALAGRHPGVGVVSKLLGSVLHALGEHAEAAAVLGRAVAELPGDAQ AHSNLGNALAVLGRIDEAIDAHRRAIRLQPEQATPHYNLGCVLLQAGRRSEAADAWAEAQTRAPDDAELAALYRDLLLEL GDNGRLMDFCRAQIARGREDGGVLALAGALALADPAGDIDEAERWLVAALGLAPDDASSWSNLCVLRCRQGRFADAVDAG RQAVAAAPEWAQGHSNLALALREAGAREEARTHCLEALQLDGECVDAYYNLGCIAADLGEHELAREAGIEAVKRMPRPGW LLQAAHACRYVADWEAAELLEAELARVCDDPAGLPTGGDALAPFAFLTVPGTDAAAQAAVARAFAAQFERVPAVRRAASA PGARPLRVGLLSADFRDHATAHLMTGVLEAIDPGRVRLIAYDYGPQHDDDYRRRLQRAIPKWVMLAGLSDAEAAGRIAAD AVDIVIDLKGWTQGFRAPILAYRPVPLQMQWLGFPGTMGAAWLDYIIADGIVVPAGAEAGYSERVLRLPGCYQPNDGQRP PVTPLSRAEAGLPDDALVLAAFHQHYKITRASFALWMRLLRGLPDALLWLLEGAPSAMARLSQEARAHGVDPARLCWAPR VPVVHHLNRLAVADIALDAFPVNAHTTASDALWAGVPQVARRGDTFVSRVSASILDAAGLPELIAADDASYEALVLALGT DAGRRQAVRQRVADAVKHAGLFNSAAFARHLEDALEWAWTRHCAGLPPASTPVP
Specific function: Unknown
COG id: COG3914
COG function: function code O; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI32307150, Length=614, Percent_Identity=27.3615635179153, Blast_Score=196, Evalue=7e-50, Organism=Homo sapiens, GI32307148, Length=614, Percent_Identity=27.3615635179153, Blast_Score=196, Evalue=7e-50, Organism=Homo sapiens, GI83415184, Length=311, Percent_Identity=25.7234726688103, Blast_Score=66, Evalue=1e-10, Organism=Caenorhabditis elegans, GI115532690, Length=552, Percent_Identity=28.6231884057971, Blast_Score=198, Evalue=1e-50, Organism=Caenorhabditis elegans, GI115532692, Length=552, Percent_Identity=28.6231884057971, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI17647755, Length=578, Percent_Identity=28.3737024221453, Blast_Score=208, Evalue=9e-54, Organism=Drosophila melanogaster, GI24585827, Length=578, Percent_Identity=28.3737024221453, Blast_Score=208, Evalue=9e-54, Organism=Drosophila melanogaster, GI24585829, Length=578, Percent_Identity=28.3737024221453, Blast_Score=208, Evalue=9e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82465; Mature: 82465
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPMSPLPPADMQRLQEAVEHFRAGRAEAALPLARALAGRHPGVGVVSKLLGSVLHALGE CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC HAEAAAVLGRAVAELPGDAQAHSNLGNALAVLGRIDEAIDAHRRAIRLQPEQATPHYNLG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC CVLLQAGRRSEAADAWAEAQTRAPDDAELAALYRDLLLELGDNGRLMDFCRAQIARGRED EEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC GGVLALAGALALADPAGDIDEAERWLVAALGLAPDDASSWSNLCVLRCRQGRFADAVDAG CCEEEEHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHCEEHEEECCCCCHHHHHHC RQAVAAAPEWAQGHSNLALALREAGAREEARTHCLEALQLDGECVDAYYNLGCIAADLGE CHHHHCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHEECCCH HELAREAGIEAVKRMPRPGWLLQAAHACRYVADWEAAELLEAELARVCDDPAGLPTGGDA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCC LAPFAFLTVPGTDAAAQAAVARAFAAQFERVPAVRRAASAPGARPLRVGLLSADFRDHAT CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHH AHLMTGVLEAIDPGRVRLIAYDYGPQHDDDYRRRLQRAIPKWVMLAGLSDAEAAGRIAAD HHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHCCCCHHHHCHHHHC AVDIVIDLKGWTQGFRAPILAYRPVPLQMQWLGFPGTMGAAWLDYIIADGIVVPAGAEAG EEEEEEECCHHHHHHCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCEEEECCCCCC YSERVLRLPGCYQPNDGQRPPVTPLSRAEAGLPDDALVLAAFHQHYKITRASFALWMRLL CCCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RGLPDALLWLLEGAPSAMARLSQEARAHGVDPARLCWAPRVPVVHHLNRLAVADIALDAF HCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCC PVNAHTTASDALWAGVPQVARRGDTFVSRVSASILDAAGLPELIAADDASYEALVLALGT CCCCCCCCCHHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEEECC DAGRRQAVRQRVADAVKHAGLFNSAAFARHLEDALEWAWTRHCAGLPPASTPVP CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNPMSPLPPADMQRLQEAVEHFRAGRAEAALPLARALAGRHPGVGVVSKLLGSVLHALGE CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC HAEAAAVLGRAVAELPGDAQAHSNLGNALAVLGRIDEAIDAHRRAIRLQPEQATPHYNLG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC CVLLQAGRRSEAADAWAEAQTRAPDDAELAALYRDLLLELGDNGRLMDFCRAQIARGRED EEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC GGVLALAGALALADPAGDIDEAERWLVAALGLAPDDASSWSNLCVLRCRQGRFADAVDAG CCEEEEHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHCEEHEEECCCCCHHHHHHC RQAVAAAPEWAQGHSNLALALREAGAREEARTHCLEALQLDGECVDAYYNLGCIAADLGE CHHHHCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHEECCCH HELAREAGIEAVKRMPRPGWLLQAAHACRYVADWEAAELLEAELARVCDDPAGLPTGGDA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCC LAPFAFLTVPGTDAAAQAAVARAFAAQFERVPAVRRAASAPGARPLRVGLLSADFRDHAT CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHH AHLMTGVLEAIDPGRVRLIAYDYGPQHDDDYRRRLQRAIPKWVMLAGLSDAEAAGRIAAD HHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHCCCCHHHHCHHHHC AVDIVIDLKGWTQGFRAPILAYRPVPLQMQWLGFPGTMGAAWLDYIIADGIVVPAGAEAG EEEEEEECCHHHHHHCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCEEEECCCCCC YSERVLRLPGCYQPNDGQRPPVTPLSRAEAGLPDDALVLAAFHQHYKITRASFALWMRLL CCCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RGLPDALLWLLEGAPSAMARLSQEARAHGVDPARLCWAPRVPVVHHLNRLAVADIALDAF HCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCC PVNAHTTASDALWAGVPQVARRGDTFVSRVSASILDAAGLPELIAADDASYEALVLALGT CCCCCCCCCHHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEEECC DAGRRQAVRQRVADAVKHAGLFNSAAFARHLEDALEWAWTRHCAGLPPASTPVP CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA