| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yijE [C]
Identifier: 119898895
GI number: 119898895
Start: 2887497
End: 2888339
Strand: Direct
Name: yijE [C]
Synonym: azo2604
Alternate gene names: 119898895
Gene position: 2887497-2888339 (Clockwise)
Preceding gene: 119898891
Following gene: 119898897
Centisome position: 65.98
GC content: 73.55
Gene sequence:
>843_bases ATGACGCCAGCCCGCACCGCCGTGCTGACCCTGATCGCGATGATCGCCTTTGCCGCCAATTCGCTGTTGTGCCGGCTGGC CCTGCGCGAAACCGGCATCGACGCCGCCAGCTTCACCGCCATCCGCCTCGCCTCCGGGGCGCTGGTGCTGTGGTTGATCG TGATCCTGCGCGGCGGCGGCATCCGCAGCCATGGCAGCTGGGCGTCGGGCCTGGCGCTGTTCGCGTATGCCGCGGCCTTC TCCTACGCCTATGTCAGTCTGCCTGCCGCGGCCGGCGCCTTGCTGCTGTTCGGCGCGGTGCAGGCGACGATGATCGGCTA CGGCCTTGCCCACGGCGAACGCTTCAATCGGCGCCAGACCATCGGCCTGCTGCTCGCCGCCGGCGGCCTGGTGGGTTTGC TGCTGCCGGGCCTGTCCGCCCCGCCGCTGGGTGGCGCGGTGCTGATGATCGGCGCCGGCGCGGCGTGGGGGGTGTATTCA CTGCGGGGGCGCGGCGCCGCCAACCCGACTGCGGTCACCGCGGGCAACTTCGTGCGCGCGCTACCGTTCGCGGCCGCGCT GAGCCTCTTGGCCGCAGCGCATGGCGCGGTGGACGGCGCAGGCGCGGCCTACGCCGTGGCGTCGGGCGCGCTGGCGTCCG GCCTGGGTTATGCGATCTGGTATGCGGCGCTGCCCGGCCTGCGCGCCACCAGCGCCGCCACCGTGCAACTGAGCGTGCCC ATCATCGCCGCGCTCGGCGCCGCGGCCTTCCTGGGCGAGGCGATCACGCTGCGGCTTGCGCTGGCCTCGGTGGCCGTGCT CGGCGGCATCGCGCTGGTCATCACCCAGCGGCGGGCGCGCTGA
Upstream 100 bases:
>100_bases GTTGCACTCGTTTACGCGCTGTCCCCCCGCGCCCTAGCATGCGCGGGGTCGGCTCTCCAGTTCGACACGTCCCGCTCGCC CCCTTCTTCAGGACACACCG
Downstream 100 bases:
>100_bases AACCCGCGCCCAGGGTCAATACAGCCCGGCCTTGATGCTGGGGTCGTGCTCGCCGATTGCGGCGTGAATGACCTCTTCGG CCAGCGCGGTCTGCTGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTPARTAVLTLIAMIAFAANSLLCRLALRETGIDAASFTAIRLASGALVLWLIVILRGGGIRSHGSWASGLALFAYAAAF SYAYVSLPAAAGALLLFGAVQATMIGYGLAHGERFNRRQTIGLLLAAGGLVGLLLPGLSAPPLGGAVLMIGAGAAWGVYS LRGRGAANPTAVTAGNFVRALPFAAALSLLAAAHGAVDGAGAAYAVASGALASGLGYAIWYAALPGLRATSAATVQLSVP IIAALGAAAFLGEAITLRLALASVAVLGGIALVITQRRAR
Sequences:
>Translated_280_residues MTPARTAVLTLIAMIAFAANSLLCRLALRETGIDAASFTAIRLASGALVLWLIVILRGGGIRSHGSWASGLALFAYAAAF SYAYVSLPAAAGALLLFGAVQATMIGYGLAHGERFNRRQTIGLLLAAGGLVGLLLPGLSAPPLGGAVLMIGAGAAWGVYS LRGRGAANPTAVTAGNFVRALPFAAALSLLAAAHGAVDGAGAAYAVASGALASGLGYAIWYAALPGLRATSAATVQLSVP IIAALGAAAFLGEAITLRLALASVAVLGGIALVITQRRAR >Mature_279_residues TPARTAVLTLIAMIAFAANSLLCRLALRETGIDAASFTAIRLASGALVLWLIVILRGGGIRSHGSWASGLALFAYAAAFS YAYVSLPAAAGALLLFGAVQATMIGYGLAHGERFNRRQTIGLLLAAGGLVGLLLPGLSAPPLGGAVLMIGAGAAWGVYSL RGRGAANPTAVTAGNFVRALPFAAALSLLAAAHGAVDGAGAAYAVASGALASGLGYAIWYAALPGLRATSAATVQLSVPI IAALGAAAFLGEAITLRLALASVAVLGGIALVITQRRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 27802; Mature: 27671
Theoretical pI: Translated: 11.67; Mature: 11.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPARTAVLTLIAMIAFAANSLLCRLALRETGIDAASFTAIRLASGALVLWLIVILRGGG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCC IRSHGSWASGLALFAYAAAFSYAYVSLPAAAGALLLFGAVQATMIGYGLAHGERFNRRQT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHH IGLLLAAGGLVGLLLPGLSAPPLGGAVLMIGAGAAWGVYSLRGRGAANPTAVTAGNFVRA HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCEEECCCCCCCCCEEECCHHHHH LPFAAALSLLAAAHGAVDGAGAAYAVASGALASGLGYAIWYAALPGLRATSAATVQLSVP HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHH IIAALGAAAFLGEAITLRLALASVAVLGGIALVITQRRAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TPARTAVLTLIAMIAFAANSLLCRLALRETGIDAASFTAIRLASGALVLWLIVILRGGG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCC IRSHGSWASGLALFAYAAAFSYAYVSLPAAAGALLLFGAVQATMIGYGLAHGERFNRRQT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHH IGLLLAAGGLVGLLLPGLSAPPLGGAVLMIGAGAAWGVYSLRGRGAANPTAVTAGNFVRA HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCEEECCCCCCCCCEEECCHHHHH LPFAAALSLLAAAHGAVDGAGAAYAVASGALASGLGYAIWYAALPGLRATSAATVQLSVP HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHH IIAALGAAAFLGEAITLRLALASVAVLGGIALVITQRRAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10984043; 1938886 [H]