| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is hemH
Identifier: 119898873
GI number: 119898873
Start: 2862075
End: 2863166
Strand: Direct
Name: hemH
Synonym: azo2582
Alternate gene names: 119898873
Gene position: 2862075-2863166 (Clockwise)
Preceding gene: 119898872
Following gene: 119898874
Centisome position: 65.4
GC content: 69.96
Gene sequence:
>1092_bases ATGGCCCGATTCTGGACCGAAGCCCCGCATCGCCACGGCAGCACCGCGCGCACCGGCATCCTGCTGGTCAACCTCGGCAC CCCGGTTGCGCCAACGGCGGCTGCGCTGCGCCCCTACCTGCAGCAGTTCCTGTCCGACCCGCGGGTGGTGGAAATCCCAC GCGCGGTGTGGCTGCCGCTTTTGAATGGGGTGATTCTCAACACCCGCCCGAGAAAATCCGCCGCCAAGTACGCCAGCATC TGGACCGACGAAGGGTCGCCGCTGGCGGTTCATACCCGCCGCCAGGCCGAACTGATCGCGGCGCGCTTCGCCAGCCGCGA CGATGTACGGGTGGACTGGGCGATGCGCTACGGCGCGCCTGCGGTGGCCGACAAGCTGGGCGCGCTGCGGGCGGCGGGCT GCACCCGGATCCTCGTCGTTCCGATGTATCCCCAATACGCCGCGAGCACCACCGCCAGCGTCATGGATGAAGTGGCGCGC TGCCTGCAGCACTGGCGCAACCTGCCCGAGTTGCGCTTCGTGCGCAGCTTTCATGACGACCCCGGCTACATCGGCGCGCT CGCGGCCAGCGTCCGCGAGCACTGGACGCGGCACGGCCAGCCCGACCGTCTGTTGATGAGCTTTCACGGGCTGCCGCGCT ATACCCTGGAACGGGGTGATCCCTACCACTGCGAGTGCCACCGCACCGCCCGCCTGCTGGCCGAGTCCCTTGGGCTGGCG CCGGAACGCGTCATCGTGAGCTTCCAGTCCCGCTTCGGCCGCACCCGCTGGCTGGAACCCTACACCCAGCCCACGCTCGA AGCCCTCGCGCGCGACGGCGTCGGCCGCGTCGATGTGATGTGCCCGGGTTTCGTCGCAGACTGCCTGGAAACCCTGGAGG AGATCGCCATGGAATGCCGCGCCGCATTTCTCGGTGCCGGAGGGCGCGAGTTCCACTACATCCCGTGCCTGAATGAACGG CCGGACTGGATCGACGCGCTGGAACGGCGCGTGCGGAGCGAGGCCGGCAACTGGCTGACCGCCACGCCGCCCACCGACGC CGAGCGCGAAGCCGCGCGCGGCCGCGCGTTGGCCCTGGGAGCGGCCGAGTGA
Upstream 100 bases:
>100_bases ATCGTCGACATCACCGCGCGCCTGCTGTCGAACGCGCTGTCGTCCAATCACTGAATCGCTGCCCGCGCCGCGGGCCGACA ACCCAATCCCGGAAGATCCC
Downstream 100 bases:
>100_bases TGCGGCTGATCCTGCGCTGGATACTCAACGCCGTCGCCCTGCTGCTGTTGCCGGAGCTGATCTCCGGCCTGCGGGTGGAT AGCTATGCGGCCGCGCTCGT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MARFWTEAPHRHGSTARTGILLVNLGTPVAPTAAALRPYLQQFLSDPRVVEIPRAVWLPLLNGVILNTRPRKSAAKYASI WTDEGSPLAVHTRRQAELIAARFASRDDVRVDWAMRYGAPAVADKLGALRAAGCTRILVVPMYPQYAASTTASVMDEVAR CLQHWRNLPELRFVRSFHDDPGYIGALAASVREHWTRHGQPDRLLMSFHGLPRYTLERGDPYHCECHRTARLLAESLGLA PERVIVSFQSRFGRTRWLEPYTQPTLEALARDGVGRVDVMCPGFVADCLETLEEIAMECRAAFLGAGGREFHYIPCLNER PDWIDALERRVRSEAGNWLTATPPTDAEREAARGRALALGAAE
Sequences:
>Translated_363_residues MARFWTEAPHRHGSTARTGILLVNLGTPVAPTAAALRPYLQQFLSDPRVVEIPRAVWLPLLNGVILNTRPRKSAAKYASI WTDEGSPLAVHTRRQAELIAARFASRDDVRVDWAMRYGAPAVADKLGALRAAGCTRILVVPMYPQYAASTTASVMDEVAR CLQHWRNLPELRFVRSFHDDPGYIGALAASVREHWTRHGQPDRLLMSFHGLPRYTLERGDPYHCECHRTARLLAESLGLA PERVIVSFQSRFGRTRWLEPYTQPTLEALARDGVGRVDVMCPGFVADCLETLEEIAMECRAAFLGAGGREFHYIPCLNER PDWIDALERRVRSEAGNWLTATPPTDAEREAARGRALALGAAE >Mature_362_residues ARFWTEAPHRHGSTARTGILLVNLGTPVAPTAAALRPYLQQFLSDPRVVEIPRAVWLPLLNGVILNTRPRKSAAKYASIW TDEGSPLAVHTRRQAELIAARFASRDDVRVDWAMRYGAPAVADKLGALRAAGCTRILVVPMYPQYAASTTASVMDEVARC LQHWRNLPELRFVRSFHDDPGYIGALAASVREHWTRHGQPDRLLMSFHGLPRYTLERGDPYHCECHRTARLLAESLGLAP ERVIVSFQSRFGRTRWLEPYTQPTLEALARDGVGRVDVMCPGFVADCLETLEEIAMECRAAFLGAGGREFHYIPCLNERP DWIDALERRVRSEAGNWLTATPPTDAEREAARGRALALGAAE
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family
Homologues:
Organism=Homo sapiens, GI60499025, Length=340, Percent_Identity=25, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI60499021, Length=340, Percent_Identity=25, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1786681, Length=315, Percent_Identity=49.2063492063492, Blast_Score=304, Evalue=5e-84, Organism=Drosophila melanogaster, GI17864156, Length=336, Percent_Identity=24.4047619047619, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24651774, Length=272, Percent_Identity=23.5294117647059, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEMH_AZOSB (A1K8P4)
Other databases:
- EMBL: AM406670 - RefSeq: YP_934086.1 - ProteinModelPortal: A1K8P4 - SMR: A1K8P4 - STRING: A1K8P4 - GeneID: 4609028 - GenomeReviews: AM406670_GR - KEGG: azo:azo2582 - eggNOG: COG0276 - HOGENOM: HBG697135 - OMA: IRPAKSA - PhylomeDB: A1K8P4 - ProtClustDB: PRK00035 - BioCyc: ASP62928:AZO2582-MONOMER - GO: GO:0005737 - HAMAP: MF_00323 - InterPro: IPR001015 - InterPro: IPR019772 - PANTHER: PTHR11108 - TIGRFAMs: TIGR00109
Pfam domain/function: PF00762 Ferrochelatase
EC number: =4.99.1.1
Molecular weight: Translated: 40512; Mature: 40381
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARFWTEAPHRHGSTARTGILLVNLGTPVAPTAAALRPYLQQFLSDPRVVEIPRAVWLPL CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECHHHHHHHH LNGVILNTRPRKSAAKYASIWTDEGSPLAVHTRRQAELIAARFASRDDVRVDWAMRYGAP HCCEEECCCCCHHHHHHHHEECCCCCEEEEECHHHHHHHHHHHCCCCCCEEEEHHHCCCH AVADKLGALRAAGCTRILVVPMYPQYAASTTASVMDEVARCLQHWRNLPELRFVRSFHDD HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC PGYIGALAASVREHWTRHGQPDRLLMSFHGLPRYTLERGDPYHCECHRTARLLAESLGLA CCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC PERVIVSFQSRFGRTRWLEPYTQPTLEALARDGVGRVDVMCPGFVADCLETLEEIAMECR HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHH AAFLGAGGREFHYIPCLNERPDWIDALERRVRSEAGNWLTATPPTDAEREAARGRALALG HHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHHCCCEEEEC AAE CCC >Mature Secondary Structure ARFWTEAPHRHGSTARTGILLVNLGTPVAPTAAALRPYLQQFLSDPRVVEIPRAVWLPL CCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECHHHHHHHH LNGVILNTRPRKSAAKYASIWTDEGSPLAVHTRRQAELIAARFASRDDVRVDWAMRYGAP HCCEEECCCCCHHHHHHHHEECCCCCEEEEECHHHHHHHHHHHCCCCCCEEEEHHHCCCH AVADKLGALRAAGCTRILVVPMYPQYAASTTASVMDEVARCLQHWRNLPELRFVRSFHDD HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC PGYIGALAASVREHWTRHGQPDRLLMSFHGLPRYTLERGDPYHCECHRTARLLAESLGLA CCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC PERVIVSFQSRFGRTRWLEPYTQPTLEALARDGVGRVDVMCPGFVADCLETLEEIAMECR HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHH AAFLGAGGREFHYIPCLNERPDWIDALERRVRSEAGNWLTATPPTDAEREAARGRALALG HHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHHCCCEEEEC AAE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA