| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is ligI
Identifier: 119898830
GI number: 119898830
Start: 2807012
End: 2807926
Strand: Reverse
Name: ligI
Synonym: azo2539
Alternate gene names: NA
Gene position: 2807926-2807012 (Counterclockwise)
Preceding gene: 119898831
Following gene: 119898829
Centisome position: 64.17
GC content: 65.68
Gene sequence:
>915_bases ATGGAATTTGAGAAGACGCCCGGCTGGCTCGACTGGTACGCCGGCCCCTCCAAGCCCCGCTTCAAGCTGCCGGCCGGCGC GGTCGATGCGCACTGCCACGTGTTCGGCCCGGGCGCGGAGTTTCCGTACGCGCCGGAGCGCAAGTACACCCCGTGCGATG CGAGCAAGGCGCAACTCTTCGCGCTGCGCGACCACCTCGGCTTCGCCCGCAACGTGATCGTGCAGGCCACCTGCCACGGC GCCGACAACCGGGCGATGGTCGATGCCTGCAAGGCCTCGGGTGGCAAGGCGCGCGGCGTGGCGACGGTGCGCCGCACGAT CACCGACCAGGAACTGCAGGACCTGCACGCCGCCGGCGTGCGCGGCGTGCGTTTCAACTTCGTAAAGCGCTTGGTGGATT TCACCCCCAAGGACGAGCTGCTGGAAATCGCCAACCGCATCGCGCCGCTGGGCTGGCATGTGGTGATCTATTTCGAGGCG GTGGATCTGCCCGAGCTGTGGGATTTCTTCACCGCGCTGCCGACCACGGTGGTGGTGGACCACATGGGCCGCCCGGATGT GTCCAAGCCGGTGGATGGCCCGGAGTTCGAGCTGTTCGTGAAGTTCATGCGGGACAATCCCAACGTCTGGTCCAAGGTGA GCTGCCCGGAACGCCTGTCAGTGACCGGCCCCAAGGCGCTCAACGGTGAGCAGGCCGCCTATCGCGACGTGGTGCCGTTC GCGAAGCGCATCGTCGAGGAATTCCCCGATCGCGTGCTGTGGGGCACCGACTGGCCGCATCCGAACCTGAAGGACCACAT GCCGGACGACGGCCTGCTGGTGGATTTCATTCCGCATATCGCTGTCACGGCGGAACTGCAGCAGAAACTGCTGGTGGATA ACCCGATGCGGCTGTATTGGCCGGAAGAGGTTTGA
Upstream 100 bases:
>100_bases GACTGGCGTACCGAGGCCGACCGCATCCTGGCCGGCGTCGAATCGAATAACAAGGCGTGAGCCCACGGGCCGCGACATTC ACACCTGCAAGGACAAAGAC
Downstream 100 bases:
>100_bases GTTTGGTTGTTGGGGGGTTGGGTTTTGGGTTGGTAGGGGCCTGATCGGCTCGGGGGCGAGCCGCGCCGCCGGGGGTGTTC CTTCCGTCCGGCTGCGGAAC
Product: 2-pyrone-4,6-dicarboxylate hydrolase
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; Metal-Dependent Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarboxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; Exported Protein
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MEFEKTPGWLDWYAGPSKPRFKLPAGAVDAHCHVFGPGAEFPYAPERKYTPCDASKAQLFALRDHLGFARNVIVQATCHG ADNRAMVDACKASGGKARGVATVRRTITDQELQDLHAAGVRGVRFNFVKRLVDFTPKDELLEIANRIAPLGWHVVIYFEA VDLPELWDFFTALPTTVVVDHMGRPDVSKPVDGPEFELFVKFMRDNPNVWSKVSCPERLSVTGPKALNGEQAAYRDVVPF AKRIVEEFPDRVLWGTDWPHPNLKDHMPDDGLLVDFIPHIAVTAELQQKLLVDNPMRLYWPEEV
Sequences:
>Translated_304_residues MEFEKTPGWLDWYAGPSKPRFKLPAGAVDAHCHVFGPGAEFPYAPERKYTPCDASKAQLFALRDHLGFARNVIVQATCHG ADNRAMVDACKASGGKARGVATVRRTITDQELQDLHAAGVRGVRFNFVKRLVDFTPKDELLEIANRIAPLGWHVVIYFEA VDLPELWDFFTALPTTVVVDHMGRPDVSKPVDGPEFELFVKFMRDNPNVWSKVSCPERLSVTGPKALNGEQAAYRDVVPF AKRIVEEFPDRVLWGTDWPHPNLKDHMPDDGLLVDFIPHIAVTAELQQKLLVDNPMRLYWPEEV >Mature_304_residues MEFEKTPGWLDWYAGPSKPRFKLPAGAVDAHCHVFGPGAEFPYAPERKYTPCDASKAQLFALRDHLGFARNVIVQATCHG ADNRAMVDACKASGGKARGVATVRRTITDQELQDLHAAGVRGVRFNFVKRLVDFTPKDELLEIANRIAPLGWHVVIYFEA VDLPELWDFFTALPTTVVVDHMGRPDVSKPVDGPEFELFVKFMRDNPNVWSKVSCPERLSVTGPKALNGEQAAYRDVVPF AKRIVEEFPDRVLWGTDWPHPNLKDHMPDDGLLVDFIPHIAVTAELQQKLLVDNPMRLYWPEEV
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34240; Mature: 34240
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFEKTPGWLDWYAGPSKPRFKLPAGAVDAHCHVFGPGAEFPYAPERKYTPCDASKAQLF CCCCCCCCCEEECCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHH ALRDHLGFARNVIVQATCHGADNRAMVDACKASGGKARGVATVRRTITDQELQDLHAAGV HHHHHHHHHHCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC RGVRFNFVKRLVDFTPKDELLEIANRIAPLGWHVVIYFEAVDLPELWDFFTALPTTVVVD CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHH HMGRPDVSKPVDGPEFELFVKFMRDNPNVWSKVSCPERLSVTGPKALNGEQAAYRDVVPF CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHH AKRIVEEFPDRVLWGTDWPHPNLKDHMPDDGLLVDFIPHIAVTAELQQKLLVDNPMRLYW HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEC PEEV CCCC >Mature Secondary Structure MEFEKTPGWLDWYAGPSKPRFKLPAGAVDAHCHVFGPGAEFPYAPERKYTPCDASKAQLF CCCCCCCCCEEECCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHH ALRDHLGFARNVIVQATCHGADNRAMVDACKASGGKARGVATVRRTITDQELQDLHAAGV HHHHHHHHHHCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC RGVRFNFVKRLVDFTPKDELLEIANRIAPLGWHVVIYFEAVDLPELWDFFTALPTTVVVD CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHH HMGRPDVSKPVDGPEFELFVKFMRDNPNVWSKVSCPERLSVTGPKALNGEQAAYRDVVPF CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHH AKRIVEEFPDRVLWGTDWPHPNLKDHMPDDGLLVDFIPHIAVTAELQQKLLVDNPMRLYW HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEC PEEV CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA