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The map label for this gene is dctP5 [H]

Identifier: 119898812

GI number: 119898812

Start: 2787622

End: 2788647

Strand: Reverse

Name: dctP5 [H]

Synonym: azo2521

Alternate gene names: 119898812

Gene position: 2788647-2787622 (Counterclockwise)

Preceding gene: 119898813

Following gene: 119898811

Centisome position: 63.73

GC content: 66.37

Gene sequence:

>1026_bases
ATGAAAGTCCGTAACCTGGCGCTGGGCATTGCCGCCGCCATGCTGGTTCCTGCCGCCGCCCACGCGCAGGAGGTTGTCCT
GAAGGTGGCGCACTTCCTGCCGCCGGTGTCGCCCGCGCACACCAAGTTCATCACCCCCTGGTGCGACAAGGTCGCCGCGG
AGTCGCAGGGCAAGATCAAGTGTCAGCTCTACCCGGCGATGCAGCTCGGCGGCACCCCGCCGCAACTGCTCAACCAGGTG
CGCGACGGCGTTGCCGACATCGTGTGGACGCTGCCGGGCTACACCCCGGGCCGCTTCCCGGTGTCCGAAGTGTTCGAACT
GCCCTTTGTCGCCACCACGCCGGAAGCCACCTCGCGCGCGCTGTGGGACTTCGTGCAGAAGAACGCGATGAGCGAATTCG
CCGGCATGAAGCCGCTGGCCACCTGGGTGCCGGGGCCGTACGTCTTCCACTTCCGCGACAAGCAGGTGAAGACGCTGGAA
GACCTGAAGGGCATGAAGGTGCGTGCGCCGTCGCGCCTGGGCAACCGCATGCTGACCGCGCTGGGCGCCACGCCGGTGGG
GATGCCGGTGCCGCAGATGGCCGAAAGCCTCTCCAAGGGCGTGATCGAGGCGGGCATGATCCCGTGGGAAGTGGTGCCCT
CGACCAAGACCCACGAGCTGACCCGCTTCCACGCCGAAGCCTCCGACCACAACGCCATCCTCACCTCGACGATGGTGTTC
GTGATGAACCAGAAGAAGTACGACAGCCTGCCGCCCGAGCTGAAGAAGGTCATCGACAACAATAGCGGGCGTGAAGTGTC
GGCCTGGGTGTCCACCCAGTTCAAGGACGCCGACACCGCCGGCCGCGAAGCCACCGCCGCGCGCGGCAACACCATCTACG
CCATCGCCCCGGCCGAACTCGCCCGCTGGCGTACCGCCACCCAGGAGGTGGACGACGAGTGGATGAAGGAAGTGGCTGCC
AAGGGCGTCGACGGCAAGAAGATGTACGACGAGGCCGCCGCGCTGGTGAAGCAGTACTCCAAGTAA

Upstream 100 bases:

>100_bases
ATCACTGGCGGACGCGGCAGACTGTCCTCGGTGTGAAATCGGGTTCGAGAGTCCGGCGTCCGACCGGGCCGAACCCCGTC
AGTCAAACGAGGAGACGCTG

Downstream 100 bases:

>100_bases
GGACGTCCCGCGTCCTGCCGGCATCCGGGGGCGGCCGCTCGCCGCCCCCGGTGCCATTCCAAGTTCCTGATCCGTATCGG
AGTCCTTCATGGCCGAGTCC

Product: putative C4-dicarboxylate-binding periplasmic protein

Products: NA

Alternate protein names: Extracytoplasmic solute receptor protein siaP; N-acetylneuraminic-binding protein; Neu5Ac-binding protein [H]

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MKVRNLALGIAAAMLVPAAAHAQEVVLKVAHFLPPVSPAHTKFITPWCDKVAAESQGKIKCQLYPAMQLGGTPPQLLNQV
RDGVADIVWTLPGYTPGRFPVSEVFELPFVATTPEATSRALWDFVQKNAMSEFAGMKPLATWVPGPYVFHFRDKQVKTLE
DLKGMKVRAPSRLGNRMLTALGATPVGMPVPQMAESLSKGVIEAGMIPWEVVPSTKTHELTRFHAEASDHNAILTSTMVF
VMNQKKYDSLPPELKKVIDNNSGREVSAWVSTQFKDADTAGREATAARGNTIYAIAPAELARWRTATQEVDDEWMKEVAA
KGVDGKKMYDEAAALVKQYSK

Sequences:

>Translated_341_residues
MKVRNLALGIAAAMLVPAAAHAQEVVLKVAHFLPPVSPAHTKFITPWCDKVAAESQGKIKCQLYPAMQLGGTPPQLLNQV
RDGVADIVWTLPGYTPGRFPVSEVFELPFVATTPEATSRALWDFVQKNAMSEFAGMKPLATWVPGPYVFHFRDKQVKTLE
DLKGMKVRAPSRLGNRMLTALGATPVGMPVPQMAESLSKGVIEAGMIPWEVVPSTKTHELTRFHAEASDHNAILTSTMVF
VMNQKKYDSLPPELKKVIDNNSGREVSAWVSTQFKDADTAGREATAARGNTIYAIAPAELARWRTATQEVDDEWMKEVAA
KGVDGKKMYDEAAALVKQYSK
>Mature_341_residues
MKVRNLALGIAAAMLVPAAAHAQEVVLKVAHFLPPVSPAHTKFITPWCDKVAAESQGKIKCQLYPAMQLGGTPPQLLNQV
RDGVADIVWTLPGYTPGRFPVSEVFELPFVATTPEATSRALWDFVQKNAMSEFAGMKPLATWVPGPYVFHFRDKQVKTLE
DLKGMKVRAPSRLGNRMLTALGATPVGMPVPQMAESLSKGVIEAGMIPWEVVPSTKTHELTRFHAEASDHNAILTSTMVF
VMNQKKYDSLPPELKKVIDNNSGREVSAWVSTQFKDADTAGREATAARGNTIYAIAPAELARWRTATQEVDDEWMKEVAA
KGVDGKKMYDEAAALVKQYSK

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system siaPT involved in the uptake of sialic acid. This protein specifically binds sialic acid [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=263, Percent_Identity=26.9961977186312, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 37360; Mature: 37360

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRNLALGIAAAMLVPAAAHAQEVVLKVAHFLPPVSPAHTKFITPWCDKVAAESQGKIK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEE
CQLYPAMQLGGTPPQLLNQVRDGVADIVWTLPGYTPGRFPVSEVFELPFVATTPEATSRA
EEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEECCCHHHHH
LWDFVQKNAMSEFAGMKPLATWVPGPYVFHFRDKQVKTLEDLKGMKVRAPSRLGNRMLTA
HHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCHHHHHHHHCCCEEECHHHHHHHHHHH
LGATPVGMPVPQMAESLSKGVIEAGMIPWEVVPSTKTHELTRFHAEASDHNAILTSTMVF
HCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHH
VMNQKKYDSLPPELKKVIDNNSGREVSAWVSTQFKDADTAGREATAARGNTIYAIAPAEL
HHCCHHCCCCCHHHHHHHCCCCCCEEEHHHHHCCCCCCCCCCCHHHCCCCEEEEECHHHH
ARWRTATQEVDDEWMKEVAAKGVDGKKMYDEAAALVKQYSK
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVRNLALGIAAAMLVPAAAHAQEVVLKVAHFLPPVSPAHTKFITPWCDKVAAESQGKIK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEE
CQLYPAMQLGGTPPQLLNQVRDGVADIVWTLPGYTPGRFPVSEVFELPFVATTPEATSRA
EEEECHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEECCCHHHHH
LWDFVQKNAMSEFAGMKPLATWVPGPYVFHFRDKQVKTLEDLKGMKVRAPSRLGNRMLTA
HHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCHHHHHHHHCCCEEECHHHHHHHHHHH
LGATPVGMPVPQMAESLSKGVIEAGMIPWEVVPSTKTHELTRFHAEASDHNAILTSTMVF
HCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHH
VMNQKKYDSLPPELKKVIDNNSGREVSAWVSTQFKDADTAGREATAARGNTIYAIAPAEL
HHCCHHCCCCCHHHHHHHCCCCCCEEEHHHHHCCCCCCCCCCCHHHCCCCEEEEECHHHH
ARWRTATQEVDDEWMKEVAAKGVDGKKMYDEAAALVKQYSK
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA