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The map label for this gene is aidB2 [H]

Identifier: 119898785

GI number: 119898785

Start: 2756715

End: 2758502

Strand: Reverse

Name: aidB2 [H]

Synonym: azo2494

Alternate gene names: 119898785

Gene position: 2758502-2756715 (Counterclockwise)

Preceding gene: 119898786

Following gene: 119898784

Centisome position: 63.04

GC content: 68.9

Gene sequence:

>1788_bases
ATGTTCGACTACACCGCCCCCCTGCGGGACATGCAGTTCATCCTGAAGGAGCTCGCCGGGCTAGACGCAGTCGGCGCGTT
GCCCGGCTGCGAGGAAGCCTCGCCCGATCTGGTTGCCGCCATCCTTGAAGAAGCCGGCAAGTTCGCCGCCGGCGTGCTGG
CGCCGATCAATCGTCAGGGCGACGAGCAGGGGTGCAGGCTGGAGGACGGCAAGGTGATTGCGCCGGACGGCTGGCAGGAG
GCCTATACCCAGTTCAGCGAATCCGGCTGGATCGGGCTGTCGCTGCCCACCGAATTCGGCGGCCAGGGCTTGCCCAAGCT
GGTGTCCACGCCGGTGTGGGAGATGTGGTTCTCCACCAACATGGCCTTCACCATGCTGCCGCAGTTGAACGTCGGTCAGG
CCGAGGCGCTGCTGATCGCCGCTACCGACGAGCAGAAGCAGACCTGGCTGCACAAGGTGGTGAGCGGCGAGTGGGGCAGC
ACGATGAACCTCACCGAACCGCAGGCCGGCTCCGACCTCGCCGCCACCCGCGCGCGCGCCGAACCCGCGGCCGACGGCAG
CTATCGCCTGTTCGGCCAGAAGATCTTCATCTCCTACGGCGAACACGAACTCACCCCCAACATCGTGCACCTGGTGCTGG
CCCGTCTGCCGGACGCACCGGCCGGGGTGAAGGGGTTGTCGCTGTTCATCGTGCCGAAGTACCTGGTCAATGCCGACGGC
AGCCTGGGCGACAGGAATGACGTGCGCTGCATCTCCATCGAACACAAGATGGGCATCCACGGCAGCCCCACCTGCACCAT
GAGCTACGGCGACAACGGCGGGGCGGTCGGCTACCTGGTGGGGCAGCCCAACCGCGGGCTGGAAACCATGTTCATCATGA
TGAACGAGGCCCGCTTCGGCGTCGGCGTGCAGGGCGCGGGGCTGGCCGAGCGCGCCTACCAGTTCGCCCTCGGCTACGCC
CGCGACCGCGTGCAGGGCCGCGACGCGGTGAGCGGCGAGGCCGGCAAGCCCATCCTCCACCACCCCGACGTCAAGCGCAT
GCTGCTCGGCATGCGGGCACGGGTGATGGCGATGCGCGCCTTGCTCTACACCGCCGCCGGCTGGTTCGACTTTGCCCACC
ACAGCGCCGACAAGGCGGTGGCCGACAAGTACCGCCGCTATGTCGATCTGCTGATGCCGGTGGCCAAGGGCTGGAGCACC
GAGGTGGGCAACGACGTCTGCGACGAGGCCATCCAGGTCTTCGGCGGCATGGGCTTCGTGGAGGAGACCGGCATCGCCCA
GTTCTTCCGCGACGCCCGCATCATCACCATCTACGAAGGCACCACCGGCATCCAGGCCAACGACCTGATCGGCCGCAAGA
TCCTGCGCGAGAACGGCGCCACCCTGCGCGAGCTGATCGCCGACCTCAGCGCCACCGTGCTGGCGCTGCGCGAGGACGAG
CAGCTGGCCGACATCGCCGACGCCTTCGCCGAGACCATCGACGCGCTCGAAACCGCCGCCGACTGGGTGCTCGCCAACGG
CAAGGACCGTCTGGCCGACGTGCTCGCCGGCGCGGTGCCCTTCCTCTACCTGCTCGGCACGGTCGTGGGCGGCTGGCAGC
TCGCCCGCGCCGCGCAGGCCGCGCGCCGGCGGCTGGTGGAAGGCGAGGGCGACGCCGCCTATCACGCCAGCCTGATCGAA
CTCGCGCGCTTCTACCTGGCGACGGTCGGCCCGCAGGCAGCGGCCAACGCCGCCACCGTGTGCGAGGCGGGCGGTGCGCT
GACCCGCTTCGACGACAGCGCTTTCTGA

Upstream 100 bases:

>100_bases
TTGAAAGGGGAGGAACAACCCCCCTTTCCGCCCTTCCGCGACAGCGCAGCTGAAGCCCCCACCCGAACACCAAAAAAAGC
ACCACAAGGAGACCCTCACC

Downstream 100 bases:

>100_bases
TGGACGCGAAGGAAGCCGGCGTGCAGACCGCGCACTTCGCCTCGCTCGACGCACTGTCGCGTGCCGTGGGCCGCGAGGTC
GCGGTCGGCAGCTGGCTGAC

Product: putative acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 595

Protein sequence:

>595_residues
MFDYTAPLRDMQFILKELAGLDAVGALPGCEEASPDLVAAILEEAGKFAAGVLAPINRQGDEQGCRLEDGKVIAPDGWQE
AYTQFSESGWIGLSLPTEFGGQGLPKLVSTPVWEMWFSTNMAFTMLPQLNVGQAEALLIAATDEQKQTWLHKVVSGEWGS
TMNLTEPQAGSDLAATRARAEPAADGSYRLFGQKIFISYGEHELTPNIVHLVLARLPDAPAGVKGLSLFIVPKYLVNADG
SLGDRNDVRCISIEHKMGIHGSPTCTMSYGDNGGAVGYLVGQPNRGLETMFIMMNEARFGVGVQGAGLAERAYQFALGYA
RDRVQGRDAVSGEAGKPILHHPDVKRMLLGMRARVMAMRALLYTAAGWFDFAHHSADKAVADKYRRYVDLLMPVAKGWST
EVGNDVCDEAIQVFGGMGFVEETGIAQFFRDARIITIYEGTTGIQANDLIGRKILRENGATLRELIADLSATVLALREDE
QLADIADAFAETIDALETAADWVLANGKDRLADVLAGAVPFLYLLGTVVGGWQLARAAQAARRRLVEGEGDAAYHASLIE
LARFYLATVGPQAAANAATVCEAGGALTRFDDSAF

Sequences:

>Translated_595_residues
MFDYTAPLRDMQFILKELAGLDAVGALPGCEEASPDLVAAILEEAGKFAAGVLAPINRQGDEQGCRLEDGKVIAPDGWQE
AYTQFSESGWIGLSLPTEFGGQGLPKLVSTPVWEMWFSTNMAFTMLPQLNVGQAEALLIAATDEQKQTWLHKVVSGEWGS
TMNLTEPQAGSDLAATRARAEPAADGSYRLFGQKIFISYGEHELTPNIVHLVLARLPDAPAGVKGLSLFIVPKYLVNADG
SLGDRNDVRCISIEHKMGIHGSPTCTMSYGDNGGAVGYLVGQPNRGLETMFIMMNEARFGVGVQGAGLAERAYQFALGYA
RDRVQGRDAVSGEAGKPILHHPDVKRMLLGMRARVMAMRALLYTAAGWFDFAHHSADKAVADKYRRYVDLLMPVAKGWST
EVGNDVCDEAIQVFGGMGFVEETGIAQFFRDARIITIYEGTTGIQANDLIGRKILRENGATLRELIADLSATVLALREDE
QLADIADAFAETIDALETAADWVLANGKDRLADVLAGAVPFLYLLGTVVGGWQLARAAQAARRRLVEGEGDAAYHASLIE
LARFYLATVGPQAAANAATVCEAGGALTRFDDSAF
>Mature_595_residues
MFDYTAPLRDMQFILKELAGLDAVGALPGCEEASPDLVAAILEEAGKFAAGVLAPINRQGDEQGCRLEDGKVIAPDGWQE
AYTQFSESGWIGLSLPTEFGGQGLPKLVSTPVWEMWFSTNMAFTMLPQLNVGQAEALLIAATDEQKQTWLHKVVSGEWGS
TMNLTEPQAGSDLAATRARAEPAADGSYRLFGQKIFISYGEHELTPNIVHLVLARLPDAPAGVKGLSLFIVPKYLVNADG
SLGDRNDVRCISIEHKMGIHGSPTCTMSYGDNGGAVGYLVGQPNRGLETMFIMMNEARFGVGVQGAGLAERAYQFALGYA
RDRVQGRDAVSGEAGKPILHHPDVKRMLLGMRARVMAMRALLYTAAGWFDFAHHSADKAVADKYRRYVDLLMPVAKGWST
EVGNDVCDEAIQVFGGMGFVEETGIAQFFRDARIITIYEGTTGIQANDLIGRKILRENGATLRELIADLSATVLALREDE
QLADIADAFAETIDALETAADWVLANGKDRLADVLAGAVPFLYLLGTVVGGWQLARAAQAARRRLVEGEGDAAYHASLIE
LARFYLATVGPQAAANAATVCEAGGALTRFDDSAF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=410, Percent_Identity=25.8536585365854, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI21361497, Length=475, Percent_Identity=25.0526315789474, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI4557233, Length=369, Percent_Identity=27.9132791327913, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI226958414, Length=381, Percent_Identity=26.509186351706, Blast_Score=103, Evalue=6e-22,
Organism=Homo sapiens, GI226958412, Length=381, Percent_Identity=26.246719160105, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI4501857, Length=387, Percent_Identity=26.0981912144703, Blast_Score=100, Evalue=6e-21,
Organism=Homo sapiens, GI187960098, Length=363, Percent_Identity=26.9972451790634, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI4557231, Length=363, Percent_Identity=26.9972451790634, Blast_Score=93, Evalue=8e-19,
Organism=Homo sapiens, GI7656849, Length=370, Percent_Identity=24.5945945945946, Blast_Score=90, Evalue=7e-18,
Organism=Escherichia coli, GI87082384, Length=289, Percent_Identity=29.4117647058824, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI87081958, Length=422, Percent_Identity=24.6445497630332, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1786223, Length=370, Percent_Identity=24.8648648648649, Blast_Score=68, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71985184, Length=373, Percent_Identity=29.7587131367292, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17508101, Length=431, Percent_Identity=25.0580046403712, Blast_Score=121, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17506239, Length=405, Percent_Identity=25.4320987654321, Blast_Score=105, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI17569725, Length=421, Percent_Identity=26.8408551068884, Blast_Score=102, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17534899, Length=428, Percent_Identity=26.8691588785047, Blast_Score=102, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI86563383, Length=403, Percent_Identity=27.2952853598015, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI86563381, Length=403, Percent_Identity=27.2952853598015, Blast_Score=99, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17538396, Length=403, Percent_Identity=25.8064516129032, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=372, Percent_Identity=26.0752688172043, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71985192, Length=293, Percent_Identity=28.3276450511945, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI71990804, Length=282, Percent_Identity=26.241134751773, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17551932, Length=362, Percent_Identity=22.9281767955801, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281363737, Length=361, Percent_Identity=27.9778393351801, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI21356377, Length=384, Percent_Identity=28.125, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24646207, Length=416, Percent_Identity=26.6826923076923, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI21355753, Length=424, Percent_Identity=26.4150943396226, Blast_Score=96, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24660351, Length=408, Percent_Identity=27.2058823529412, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24666513, Length=365, Percent_Identity=25.7534246575342, Blast_Score=93, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 64001; Mature: 64001

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDYTAPLRDMQFILKELAGLDAVGALPGCEEASPDLVAAILEEAGKFAAGVLAPINRQG
CCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
DEQGCRLEDGKVIAPDGWQEAYTQFSESGWIGLSLPTEFGGQGLPKLVSTPVWEMWFSTN
CCCCCEECCCEEECCCCHHHHHHHHHCCCEEEEECCHHCCCCCCHHHHCCHHHHHHHHCC
MAFTMLPQLNVGQAEALLIAATDEQKQTWLHKVVSGEWGSTMNLTEPQAGSDLAATRARA
CEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCC
EPAADGSYRLFGQKIFISYGEHELTPNIVHLVLARLPDAPAGVKGLSLFIVPKYLVNADG
CCCCCCCEEEECEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHCCCC
SLGDRNDVRCISIEHKMGIHGSPTCTMSYGDNGGAVGYLVGQPNRGLETMFIMMNEARFG
CCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCC
VGVQGAGLAERAYQFALGYARDRVQGRDAVSGEAGKPILHHPDVKRMLLGMRARVMAMRA
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LLYTAAGWFDFAHHSADKAVADKYRRYVDLLMPVAKGWSTEVGNDVCDEAIQVFGGMGFV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCH
EETGIAQFFRDARIITIYEGTTGIQANDLIGRKILRENGATLRELIADLSATVLALREDE
HHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCH
QLADIADAFAETIDALETAADWVLANGKDRLADVLAGAVPFLYLLGTVVGGWQLARAAQA
HHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARRRLVEGEGDAAYHASLIELARFYLATVGPQAAANAATVCEAGGALTRFDDSAF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCEECCCCCCC
>Mature Secondary Structure
MFDYTAPLRDMQFILKELAGLDAVGALPGCEEASPDLVAAILEEAGKFAAGVLAPINRQG
CCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
DEQGCRLEDGKVIAPDGWQEAYTQFSESGWIGLSLPTEFGGQGLPKLVSTPVWEMWFSTN
CCCCCEECCCEEECCCCHHHHHHHHHCCCEEEEECCHHCCCCCCHHHHCCHHHHHHHHCC
MAFTMLPQLNVGQAEALLIAATDEQKQTWLHKVVSGEWGSTMNLTEPQAGSDLAATRARA
CEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCC
EPAADGSYRLFGQKIFISYGEHELTPNIVHLVLARLPDAPAGVKGLSLFIVPKYLVNADG
CCCCCCCEEEECEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHCCCC
SLGDRNDVRCISIEHKMGIHGSPTCTMSYGDNGGAVGYLVGQPNRGLETMFIMMNEARFG
CCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCC
VGVQGAGLAERAYQFALGYARDRVQGRDAVSGEAGKPILHHPDVKRMLLGMRARVMAMRA
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LLYTAAGWFDFAHHSADKAVADKYRRYVDLLMPVAKGWSTEVGNDVCDEAIQVFGGMGFV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCH
EETGIAQFFRDARIITIYEGTTGIQANDLIGRKILRENGATLRELIADLSATVLALREDE
HHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCH
QLADIADAFAETIDALETAADWVLANGKDRLADVLAGAVPFLYLLGTVVGGWQLARAAQA
HHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARRRLVEGEGDAAYHASLIELARFYLATVGPQAAANAATVCEAGGALTRFDDSAF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]