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The map label for this gene is dntR [H]

Identifier: 119898766

GI number: 119898766

Start: 2733998

End: 2734894

Strand: Reverse

Name: dntR [H]

Synonym: azo2475

Alternate gene names: 119898766

Gene position: 2734894-2733998 (Counterclockwise)

Preceding gene: 119898768

Following gene: 119898765

Centisome position: 62.5

GC content: 65.55

Gene sequence:

>897_bases
ATGAATATCCAATCGGTAGACCTCAATCTGCTCAAGATTTTCGAGGCGGTATATCTGGAGCGCAATGTCAGCCGCGCAGC
GGTCCGGCTGGAACTGACGCAGCCGTCCGTCAGCCACGGCCTGACCCGTCTGCGACTGCTGTTCGGCGATCCGCTGTTCG
TACGGACCCGCTCGGGGGTGGAGCCCACGGTCGTGGCCGACCGCATCGCCGGCCCGGTGCAGCAGGCGCTGCGCGTGCTG
CAGACCACCCTGGACGAGCATGCGCACTTCGAACCCGCCAGCTCCGGCCGTACCTTCCGCCTGCACATGAGCGACTTCGG
CGAGGTGATCTTCCTGCCGAAGCTGATGCGCGCATTGCTGGAGCGCGCGCCCGGCGTACGCATCGAAACGCGGCAACTGG
GCGGAGTGGAGCTTGCCGCTGCGCTCGACAGTGGCCAGATCGATCTCGCGATTGGTTATCTGCCCGTCCTCGACCAGGGC
TTCGAGTGTCGCCATCTGCTGGCCGACGAATATGCGGTCATCGCGCCCCGTCACCTGATCCCGTCCGGTGGCAAGGGGGA
CAACGCCTTCAACGGACTCGACTTCATCGCCGTGACCTCGCATCCGCAGACGCTGGCCATCCTGCGCGAATGCGGCCTGC
TCGATCGGGTGAAGCTGTGGGTGCCGCATTTCATGGTGGTGCCGGCGATCCTTGCCGAGCGCAACTTCGCCGCCGTCGCC
CCGCGCGAGGTGGTGCATGCCTTCAGCCCGCGCAGTCGCGTGCGCAGCTTTCCCTTGCCCGCGCTGCAACGCGGTATGGA
CGTCAATCTGTACTGGAACCGGCGCTATACCGGCGACCCCGGACATGCCTGGATGCGCGAACTGGTTGCCGACCTGTTCG
ACCGCGAGCGCAAATAG

Upstream 100 bases:

>100_bases
CGAGGAGGCCGCGGCCGGACGGGCCGCCGGGCGTTGCCGGCTCCAACTGCGGCGGTGGCGCCAGCCGCTAGAATCGAGGT
CACGCCTTTACATAGACGCC

Downstream 100 bases:

>100_bases
CCGCATCCTCCGATGAGGAGGACGCCCGGCGGCGTTCCGCCATTATCGACGCCATCTATATCTCACGTATCGCCTGCTGA
ATTGCCGCTCCCCGCCTGCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MNIQSVDLNLLKIFEAVYLERNVSRAAVRLELTQPSVSHGLTRLRLLFGDPLFVRTRSGVEPTVVADRIAGPVQQALRVL
QTTLDEHAHFEPASSGRTFRLHMSDFGEVIFLPKLMRALLERAPGVRIETRQLGGVELAAALDSGQIDLAIGYLPVLDQG
FECRHLLADEYAVIAPRHLIPSGGKGDNAFNGLDFIAVTSHPQTLAILRECGLLDRVKLWVPHFMVVPAILAERNFAAVA
PREVVHAFSPRSRVRSFPLPALQRGMDVNLYWNRRYTGDPGHAWMRELVADLFDRERK

Sequences:

>Translated_298_residues
MNIQSVDLNLLKIFEAVYLERNVSRAAVRLELTQPSVSHGLTRLRLLFGDPLFVRTRSGVEPTVVADRIAGPVQQALRVL
QTTLDEHAHFEPASSGRTFRLHMSDFGEVIFLPKLMRALLERAPGVRIETRQLGGVELAAALDSGQIDLAIGYLPVLDQG
FECRHLLADEYAVIAPRHLIPSGGKGDNAFNGLDFIAVTSHPQTLAILRECGLLDRVKLWVPHFMVVPAILAERNFAAVA
PREVVHAFSPRSRVRSFPLPALQRGMDVNLYWNRRYTGDPGHAWMRELVADLFDRERK
>Mature_298_residues
MNIQSVDLNLLKIFEAVYLERNVSRAAVRLELTQPSVSHGLTRLRLLFGDPLFVRTRSGVEPTVVADRIAGPVQQALRVL
QTTLDEHAHFEPASSGRTFRLHMSDFGEVIFLPKLMRALLERAPGVRIETRQLGGVELAAALDSGQIDLAIGYLPVLDQG
FECRHLLADEYAVIAPRHLIPSGGKGDNAFNGLDFIAVTSHPQTLAILRECGLLDRVKLWVPHFMVVPAILAERNFAAVA
PREVVHAFSPRSRVRSFPLPALQRGMDVNLYWNRRYTGDPGHAWMRELVADLFDRERK

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=298, Percent_Identity=29.1946308724832, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI87081766, Length=290, Percent_Identity=24.8275862068966, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1790147, Length=313, Percent_Identity=25.2396166134185, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1786820, Length=84, Percent_Identity=39.2857142857143, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33365; Mature: 33365

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQSVDLNLLKIFEAVYLERNVSRAAVRLELTQPSVSHGLTRLRLLFGDPLFVRTRSGV
CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCC
EPTVVADRIAGPVQQALRVLQTTLDEHAHFEPASSGRTFRLHMSDFGEVIFLPKLMRALL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH
ERAPGVRIETRQLGGVELAAALDSGQIDLAIGYLPVLDQGFECRHLLADEYAVIAPRHLI
HHCCCCEEEECCCCCEEEEEECCCCCEEEEEECHHHHCCCCCHHHHHHCCHHEECCHHCC
PSGGKGDNAFNGLDFIAVTSHPQTLAILRECGLLDRVKLWVPHFMVVPAILAERNFAAVA
CCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PREVVHAFSPRSRVRSFPLPALQRGMDVNLYWNRRYTGDPGHAWMRELVADLFDRERK
HHHHHHHCCCHHHHHCCCCHHHHCCCEEEEEECCEECCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNIQSVDLNLLKIFEAVYLERNVSRAAVRLELTQPSVSHGLTRLRLLFGDPLFVRTRSGV
CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCC
EPTVVADRIAGPVQQALRVLQTTLDEHAHFEPASSGRTFRLHMSDFGEVIFLPKLMRALL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH
ERAPGVRIETRQLGGVELAAALDSGQIDLAIGYLPVLDQGFECRHLLADEYAVIAPRHLI
HHCCCCEEEECCCCCEEEEEECCCCCEEEEEECHHHHCCCCCHHHHHHCCHHEECCHHCC
PSGGKGDNAFNGLDFIAVTSHPQTLAILRECGLLDRVKLWVPHFMVVPAILAERNFAAVA
CCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PREVVHAFSPRSRVRSFPLPALQRGMDVNLYWNRRYTGDPGHAWMRELVADLFDRERK
HHHHHHHCCCHHHHHCCCCHHHHCCCEEEEEECCEECCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]