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The map label for this gene is dctP4 [H]

Identifier: 119898763

GI number: 119898763

Start: 2729490

End: 2730527

Strand: Reverse

Name: dctP4 [H]

Synonym: azo2472

Alternate gene names: 119898763

Gene position: 2730527-2729490 (Counterclockwise)

Preceding gene: 119898764

Following gene: 119898762

Centisome position: 62.4

GC content: 65.7

Gene sequence:

>1038_bases
ATGAACTTCAAACGCAATGCAGTCGCGCTGGCCACGCTCTGGGGCAGTCTGGCAGGTGCCGCGGTCGCTGCAGACGAGGT
GGTGCTGAAGGTGCACCACTTCCTGCCGCCCAGCGCCACGGCGCACAAGAACTTCATCGAGCCCTGGTGCGCGAAGATCG
CGGCCGAGTCGGCCGGCCGGCTCAAGTGCCAGATCTATCCGGCGATGTCGCTGGGTGGAACGCCGCCTCAGCTGTTCGAC
CAGGCCAAGGACGGCATCGCGGACATCGTATGGACGGTGCCCGGCTACCAGGGCGGCCGTTTTCCGGTCACCGAACTGTT
CGAACTGCCGTTCATCACCCGCAGCGCCGAGCGCAGCAGCCCGGTGGTGTGGAACATCCTCACCAAGTACGCGGGCGATG
AATACAAGCCGGTGAAGCCGCTCATCTTCCACGTCCATGACGGCGCGCAACTGCACACCACCAGCAAGCCGATCAAGGTG
CTCGCGGATTTTCAGGGGATGAAGCTGCGTGCGCCGACCCGCCAGTCGACCCGGCTGTTGAAGGAACTGGGGGCGACGCC
GATCGGCATGCCGGCGCCGCAGGTCACCGAGGCCCTGTCCAAGGGCGTGGTCGACGGAGCCATGCTGCCGTGGGAGGTGG
TGCCGCCGCTGAAAGTGCATGAGGTGGTCAAGTTCCACACCGAAACCGACGAGTCGATGCCGATGCTGTCGAACACGGTT
TTCGTGTTCGCGATGAACCCGGCCCGTTATGAAAAGCTGCCGCCGGAGCTGAAGAAGGTGATCGATGCGAACAGCGGGGT
CGAAGCCTCCGCATGGGTCGGCAAGGTGTTTGACGAAGCACGCGTAGTGGGCAGGAAGCAGGCGCAGGAGCGCGGCAACG
TGATGTACGAGGTGCCAGCGGCCGAGCGGACGGGCTGGTTGGTGGCCGGCGAGCGGGTGGCCGCGCAGTGGGTGGAGGAA
ACGGCGGCCAAGGGCTTGCCGGCGAAGGACATCCTGGCCGAGGCCAAGGCCGCGATCAACGCGCGCCAGGGGCACTGA

Upstream 100 bases:

>100_bases
CCGCATCGGCCGCCCGCGCCCGCCCGATGGCAGGCCGCGGGCCGTACAGGAACACCGGCCCCGATCGAACGTGGCCGGCA
TAACGCGAGGAGACAAAAAA

Downstream 100 bases:

>100_bases
GCGGTCCGGCGCACCGCCGGCCGCGGGCAGCCCACGGTCGGCGATGCGGCGGATGTTCCCCGCGCAACGCTGTTGGAGAA
AACATGACGAATCACGACAC

Product: putative C4-dicarboxylate-binding periplasmic protein

Products: NA

Alternate protein names: Extracytoplasmic solute receptor protein siaP; N-acetylneuraminic-binding protein; Neu5Ac-binding protein [H]

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MNFKRNAVALATLWGSLAGAAVAADEVVLKVHHFLPPSATAHKNFIEPWCAKIAAESAGRLKCQIYPAMSLGGTPPQLFD
QAKDGIADIVWTVPGYQGGRFPVTELFELPFITRSAERSSPVVWNILTKYAGDEYKPVKPLIFHVHDGAQLHTTSKPIKV
LADFQGMKLRAPTRQSTRLLKELGATPIGMPAPQVTEALSKGVVDGAMLPWEVVPPLKVHEVVKFHTETDESMPMLSNTV
FVFAMNPARYEKLPPELKKVIDANSGVEASAWVGKVFDEARVVGRKQAQERGNVMYEVPAAERTGWLVAGERVAAQWVEE
TAAKGLPAKDILAEAKAAINARQGH

Sequences:

>Translated_345_residues
MNFKRNAVALATLWGSLAGAAVAADEVVLKVHHFLPPSATAHKNFIEPWCAKIAAESAGRLKCQIYPAMSLGGTPPQLFD
QAKDGIADIVWTVPGYQGGRFPVTELFELPFITRSAERSSPVVWNILTKYAGDEYKPVKPLIFHVHDGAQLHTTSKPIKV
LADFQGMKLRAPTRQSTRLLKELGATPIGMPAPQVTEALSKGVVDGAMLPWEVVPPLKVHEVVKFHTETDESMPMLSNTV
FVFAMNPARYEKLPPELKKVIDANSGVEASAWVGKVFDEARVVGRKQAQERGNVMYEVPAAERTGWLVAGERVAAQWVEE
TAAKGLPAKDILAEAKAAINARQGH
>Mature_345_residues
MNFKRNAVALATLWGSLAGAAVAADEVVLKVHHFLPPSATAHKNFIEPWCAKIAAESAGRLKCQIYPAMSLGGTPPQLFD
QAKDGIADIVWTVPGYQGGRFPVTELFELPFITRSAERSSPVVWNILTKYAGDEYKPVKPLIFHVHDGAQLHTTSKPIKV
LADFQGMKLRAPTRQSTRLLKELGATPIGMPAPQVTEALSKGVVDGAMLPWEVVPPLKVHEVVKFHTETDESMPMLSNTV
FVFAMNPARYEKLPPELKKVIDANSGVEASAWVGKVFDEARVVGRKQAQERGNVMYEVPAAERTGWLVAGERVAAQWVEE
TAAKGLPAKDILAEAKAAINARQGH

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system siaPT involved in the uptake of sialic acid. This protein specifically binds sialic acid [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=242, Percent_Identity=25.2066115702479, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 37585; Mature: 37585

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKRNAVALATLWGSLAGAAVAADEVVLKVHHFLPPSATAHKNFIEPWCAKIAAESAGR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
LKCQIYPAMSLGGTPPQLFDQAKDGIADIVWTVPGYQGGRFPVTELFELPFITRSAERSS
EEEEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCC
PVVWNILTKYAGDEYKPVKPLIFHVHDGAQLHTTSKPIKVLADFQGMKLRAPTRQSTRLL
CCHHHHHHHHCCCCCCCCCEEEEEEECCCEEECCCCCHHHHCCCCCCEEECCCHHHHHHH
KELGATPIGMPAPQVTEALSKGVVDGAMLPWEVVPPLKVHEVVKFHTETDESMPMLSNTV
HHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEE
FVFAMNPARYEKLPPELKKVIDANSGVEASAWVGKVFDEARVVGRKQAQERGNVMYEVPA
EEEEECCHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
AERTGWLVAGERVAAQWVEETAAKGLPAKDILAEAKAAINARQGH
CCCCCEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNFKRNAVALATLWGSLAGAAVAADEVVLKVHHFLPPSATAHKNFIEPWCAKIAAESAGR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
LKCQIYPAMSLGGTPPQLFDQAKDGIADIVWTVPGYQGGRFPVTELFELPFITRSAERSS
EEEEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCC
PVVWNILTKYAGDEYKPVKPLIFHVHDGAQLHTTSKPIKVLADFQGMKLRAPTRQSTRLL
CCHHHHHHHHCCCCCCCCCEEEEEEECCCEEECCCCCHHHHCCCCCCEEECCCHHHHHHH
KELGATPIGMPAPQVTEALSKGVVDGAMLPWEVVPPLKVHEVVKFHTETDESMPMLSNTV
HHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEE
FVFAMNPARYEKLPPELKKVIDANSGVEASAWVGKVFDEARVVGRKQAQERGNVMYEVPA
EEEEECCHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
AERTGWLVAGERVAAQWVEETAAKGLPAKDILAEAKAAINARQGH
CCCCCEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA