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The map label for this gene is wspR2 [H]

Identifier: 119898694

GI number: 119898694

Start: 2646655

End: 2647560

Strand: Direct

Name: wspR2 [H]

Synonym: azo2403

Alternate gene names: 119898694

Gene position: 2646655-2647560 (Clockwise)

Preceding gene: 119898693

Following gene: 119898695

Centisome position: 60.48

GC content: 67.77

Gene sequence:

>906_bases
ATGATGGTGGAACGCCACAGGATCCTCGTCGTCGACGACGAGCGCATCAACCGCAAGCTGCTCTCCGAACTGCTCGAGGA
GCACCACGACGTCGTCATCGCCAAGAGCGGCGAGCAGGCGCTGGAGCGGGTACAGGCCGACAGCGCGGTGGACCTCATCC
TGCTCGACGTGGTGATGCCCGGCATGAGCGGGCACGACGTGCTGCGCCGGTTGAAGGCGAGCGACGCCACCAAGGACGTT
CCGGTGATCTTCATCACCTCGCTCAATTCGGTGGACGACGAAGAGATCGGCCTCGACCTCGGCGCCGCAGACTACATCAC
CAAGCCCTTCCATCCGGGCATCGTGCGGCTGCGGGTCGAAAACCACCTGCGCTTCGTGCGCCAGCGCAAGATCCTGGAAA
CGCTGGCCGGGCGCGATTGCCTGACGGAAATCGACAACCGCCGCCGCTTCGAGGAAGTGCTGGAACGCGAATGGCGCCGT
GCCGGACGCGGCTCGGGGCCGATGTCGGTGGCGATCATCGACGTCGATTACTTCAAGCAGTACAACGACCACTACGGCCA
TGCGCGCGGCGACCAGGCGCTGAAGGCCGTCGCCAAGGCGCTGTCCGGCGGGCCCAACCGCGCGAGCGACTTTGTCGCGC
GCTACGGCGGCGAGGAGTTCGTGATGCTGTTTCCCGGCACCCCCGCCGATGGCGCGCGCGAACTGGCGGAGTCGGTGCGG
CACGCGGTCGCCTCGCTCGCAATCCCGCACGCGCACTCCGCGGTGGCGCCCCACCTGACGGTTTCGATCGGCGGCGCCAC
CAGCGACGACTACCAGTCGCCCGGCCACGCCCTGATCGAAGCCGCCGACACGATGCTGTACCGCGCCAAGGCCGAGGGCC
GTAACCGCGTCCTCTGGCGCGACTGA

Upstream 100 bases:

>100_bases
GCGGCGAGGTGGATGCGATCCTCGCCGCGATCGAGGACGTGGAATTCGATGCCGCACTGGCGCGCGTCAATGCGCTGCTG
GCCCGATTCGAGAGGAATGG

Downstream 100 bases:

>100_bases
TCGGGGTTCGCGCCGTCGCCCCTGCCGGCGCGGCGTCCGCTTCCGGTATGCTCACGGCACCGCCCGGACCCGGAGCCACG
CCGTGTCGAGAACGCGCCCG

Product: two-component response regulator

Products: NA

Alternate protein names: Bacteriophytochrome cph2 [H]

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MMVERHRILVVDDERINRKLLSELLEEHHDVVIAKSGEQALERVQADSAVDLILLDVVMPGMSGHDVLRRLKASDATKDV
PVIFITSLNSVDDEEIGLDLGAADYITKPFHPGIVRLRVENHLRFVRQRKILETLAGRDCLTEIDNRRRFEEVLEREWRR
AGRGSGPMSVAIIDVDYFKQYNDHYGHARGDQALKAVAKALSGGPNRASDFVARYGGEEFVMLFPGTPADGARELAESVR
HAVASLAIPHAHSAVAPHLTVSIGGATSDDYQSPGHALIEAADTMLYRAKAEGRNRVLWRD

Sequences:

>Translated_301_residues
MMVERHRILVVDDERINRKLLSELLEEHHDVVIAKSGEQALERVQADSAVDLILLDVVMPGMSGHDVLRRLKASDATKDV
PVIFITSLNSVDDEEIGLDLGAADYITKPFHPGIVRLRVENHLRFVRQRKILETLAGRDCLTEIDNRRRFEEVLEREWRR
AGRGSGPMSVAIIDVDYFKQYNDHYGHARGDQALKAVAKALSGGPNRASDFVARYGGEEFVMLFPGTPADGARELAESVR
HAVASLAIPHAHSAVAPHLTVSIGGATSDDYQSPGHALIEAADTMLYRAKAEGRNRVLWRD
>Mature_301_residues
MMVERHRILVVDDERINRKLLSELLEEHHDVVIAKSGEQALERVQADSAVDLILLDVVMPGMSGHDVLRRLKASDATKDV
PVIFITSLNSVDDEEIGLDLGAADYITKPFHPGIVRLRVENHLRFVRQRKILETLAGRDCLTEIDNRRRFEEVLEREWRR
AGRGSGPMSVAIIDVDYFKQYNDHYGHARGDQALKAVAKALSGGPNRASDFVARYGGEEFVMLFPGTPADGARELAESVR
HAVASLAIPHAHSAVAPHLTVSIGGATSDDYQSPGHALIEAADTMLYRAKAEGRNRVLWRD

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG3706

COG function: function code T; Response regulator containing a CheY-like receiver domain and a GGDEF domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 GGDEF domains [H]

Homologues:

Organism=Escherichia coli, GI87081881, Length=172, Percent_Identity=41.8604651162791, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI145693134, Length=168, Percent_Identity=39.8809523809524, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787262, Length=172, Percent_Identity=36.046511627907, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1786584, Length=173, Percent_Identity=32.9479768786127, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787802, Length=169, Percent_Identity=34.9112426035503, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87082007, Length=173, Percent_Identity=34.6820809248555, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1786599, Length=137, Percent_Identity=36.4963503649635, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787541, Length=170, Percent_Identity=30, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789809, Length=123, Percent_Identity=34.1463414634146, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787816, Length=172, Percent_Identity=29.0697674418605, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790863, Length=117, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788381, Length=172, Percent_Identity=32.5581395348837, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788085, Length=164, Percent_Identity=31.7073170731707, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI87082012, Length=119, Percent_Identity=36.9747899159664, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788394, Length=128, Percent_Identity=32.8125, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI2367329, Length=107, Percent_Identity=42.9906542056075, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1787056, Length=166, Percent_Identity=31.3253012048193, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1786784, Length=119, Percent_Identity=33.6134453781513, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1790860, Length=127, Percent_Identity=33.0708661417323, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790437, Length=104, Percent_Identity=39.4230769230769, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003018
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515 [H]

Pfam domain/function: PF00563 EAL; PF01590 GAF; PF00990 GGDEF; PF00360 Phytochrome [H]

EC number: NA

Molecular weight: Translated: 33439; Mature: 33439

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVERHRILVVDDERINRKLLSELLEEHHDVVIAKSGEQALERVQADSAVDLILLDVVMP
CCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCHHHHHHHHHHCC
GMSGHDVLRRLKASDATKDVPVIFITSLNSVDDEEIGLDLGAADYITKPFHPGIVRLRVE
CCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHCCCCCCHHHHCCCCCCCEEEEEHH
NHLRFVRQRKILETLAGRDCLTEIDNRRRFEEVLEREWRRAGRGSGPMSVAIIDVDYFKQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHH
YNDHYGHARGDQALKAVAKALSGGPNRASDFVARYGGEEFVMLFPGTPADGARELAESVR
HHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHH
HAVASLAIPHAHSAVAPHLTVSIGGATSDDYQSPGHALIEAADTMLYRAKAEGRNRVLWR
HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
D
C
>Mature Secondary Structure
MMVERHRILVVDDERINRKLLSELLEEHHDVVIAKSGEQALERVQADSAVDLILLDVVMP
CCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCHHHHHHHHHHCC
GMSGHDVLRRLKASDATKDVPVIFITSLNSVDDEEIGLDLGAADYITKPFHPGIVRLRVE
CCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHCCCCCCHHHHCCCCCCCEEEEEHH
NHLRFVRQRKILETLAGRDCLTEIDNRRRFEEVLEREWRRAGRGSGPMSVAIIDVDYFKQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHH
YNDHYGHARGDQALKAVAKALSGGPNRASDFVARYGGEEFVMLFPGTPADGARELAESVR
HHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHH
HAVASLAIPHAHSAVAPHLTVSIGGATSDDYQSPGHALIEAADTMLYRAKAEGRNRVLWR
HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 10978170; 11063585 [H]