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The map label for this gene is arnC [H]

Identifier: 119898671

GI number: 119898671

Start: 2620360

End: 2621466

Strand: Direct

Name: arnC [H]

Synonym: azo2380

Alternate gene names: 119898671

Gene position: 2620360-2621466 (Clockwise)

Preceding gene: 119898669

Following gene: 119898672

Centisome position: 59.88

GC content: 65.58

Gene sequence:

>1107_bases
ATGAAGGTCGTCGTCATCGTTCCAACCTATAACGAGCGCTCCAACATCGGGCCGCTGGTCGAGGCGCTCGACCAGCAGTT
CGCCACGCTGGCGCACGACATGCACATCCTCGTCGTCGACGACAACTCGCCGGACGGCACCGCGGCGGAGGTCCGCGCGC
TGCAGACGCGTTTTCCCCGGTTGCATCTGATCGAAGGCCGCAAGGCCGGCCTGGGTGCCGCCTACGTCCGCGGCATGAAC
CACGCCATGGACGCGCTGGGAGCGGACGTGGTGTTCGAGATGGACGCCGACTTCTCGCACCGCCCCGAGGACCTGCCGCG
GTTGATGGCAGAGATCGACCGCGGTGCGGATTTCGTCATCGGCAGCCGCTATGTGAAAGGCGGCAGCATCCCCGCCAACT
GGGGGCTGATGCGAAGGCTCAATTCGCTCGGCGGCAACATCGTCGCCCGCTATGTCGCGGGAATCTACCGGGTGCGGGAC
TGTACGGCCGGCTTTCGCGCGATCCGCTGCGCGGTGCTGCGCGGCATCGACTTCTCCCGCCTGCGCGTGCAGGGCTACGC
TTTCCAGGTCGCGCTGCTGCACGCCGCCGTCACCAACGGCGCGCGCGTGGTGGAGATTCCGGTGGATTTCATCGACCGCA
CGCGAGGTGAATCCAAGCTCGGCTTCGCCGACATCATGGAGTTCGTCTGGAACGCGTGGTGGATACGGCTGCAGAGTTCG
CGCGTGTTCATCAAGTTCGCGCTGGTCGGCCTTTCCGGGGTTGCGGTAAACCTGGGCGCCTTCGCCGCCTTCCTCGCGCT
GGGCATGAACAAGTTCGTCGCCTCGCCGCTGGCGATCGAGGTGTCGATCGTCTCCAACTTCCTGCTCAACAATTACTGGA
CCTTCCGCTGGCGCAAGACCCGCGACCGCGTGCGGGTGAAGGGCCTGAAGTTCAACGTGGTGTCGCTGGTGGCGCTGGGC
GTGAGCTTTTCCACCTTCGCCGCGGTGTCCTCGCTCTACCCCGCGCTGCCGCCATGGGTGCCGCAGCTGGCCGGCATTCC
CCCCGCGATGCTGGTGAACTACTTCCTCAACTCGTACTGGACCTTCCGCCATGCAGATGCCAGCTGA

Upstream 100 bases:

>100_bases
GGCCGCCGAACCCGCACGCGGACGCCAACAAGCACACAGGTGTCATGAATCCGGATGCCTATACTGCGCAGCAATATGAC
GGTTCAGGCGGGGAGTCCGG

Downstream 100 bases:

>100_bases
TCCGCGCGCCGGTGCGCTGCGCGCGCTGCTGCTGCTCGGCGCCGTAATGCTTGTCGGGCTGGCTGCCCGCCTCTACCACA
TCGGCTGGCTGCCGCTGTGG

Product: glycosyltransferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKVVVIVPTYNERSNIGPLVEALDQQFATLAHDMHILVVDDNSPDGTAAEVRALQTRFPRLHLIEGRKAGLGAAYVRGMN
HAMDALGADVVFEMDADFSHRPEDLPRLMAEIDRGADFVIGSRYVKGGSIPANWGLMRRLNSLGGNIVARYVAGIYRVRD
CTAGFRAIRCAVLRGIDFSRLRVQGYAFQVALLHAAVTNGARVVEIPVDFIDRTRGESKLGFADIMEFVWNAWWIRLQSS
RVFIKFALVGLSGVAVNLGAFAAFLALGMNKFVASPLAIEVSIVSNFLLNNYWTFRWRKTRDRVRVKGLKFNVVSLVALG
VSFSTFAAVSSLYPALPPWVPQLAGIPPAMLVNYFLNSYWTFRHADAS

Sequences:

>Translated_368_residues
MKVVVIVPTYNERSNIGPLVEALDQQFATLAHDMHILVVDDNSPDGTAAEVRALQTRFPRLHLIEGRKAGLGAAYVRGMN
HAMDALGADVVFEMDADFSHRPEDLPRLMAEIDRGADFVIGSRYVKGGSIPANWGLMRRLNSLGGNIVARYVAGIYRVRD
CTAGFRAIRCAVLRGIDFSRLRVQGYAFQVALLHAAVTNGARVVEIPVDFIDRTRGESKLGFADIMEFVWNAWWIRLQSS
RVFIKFALVGLSGVAVNLGAFAAFLALGMNKFVASPLAIEVSIVSNFLLNNYWTFRWRKTRDRVRVKGLKFNVVSLVALG
VSFSTFAAVSSLYPALPPWVPQLAGIPPAMLVNYFLNSYWTFRHADAS
>Mature_368_residues
MKVVVIVPTYNERSNIGPLVEALDQQFATLAHDMHILVVDDNSPDGTAAEVRALQTRFPRLHLIEGRKAGLGAAYVRGMN
HAMDALGADVVFEMDADFSHRPEDLPRLMAEIDRGADFVIGSRYVKGGSIPANWGLMRRLNSLGGNIVARYVAGIYRVRD
CTAGFRAIRCAVLRGIDFSRLRVQGYAFQVALLHAAVTNGARVVEIPVDFIDRTRGESKLGFADIMEFVWNAWWIRLQSS
RVFIKFALVGLSGVAVNLGAFAAFLALGMNKFVASPLAIEVSIVSNFLLNNYWTFRWRKTRDRVRVKGLKFNVVSLVALG
VSFSTFAAVSSLYPALPPWVPQLAGIPPAMLVNYFLNSYWTFRHADAS

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=234, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=5e-28,
Organism=Escherichia coli, GI1788588, Length=277, Percent_Identity=25.9927797833935, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71999402, Length=231, Percent_Identity=33.7662337662338, Blast_Score=128, Evalue=6e-30,
Organism=Saccharomyces cerevisiae, GI6325441, Length=233, Percent_Identity=32.618025751073, Blast_Score=97, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24585265, Length=238, Percent_Identity=31.5126050420168, Blast_Score=122, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 40754; Mature: 40754

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVVIVPTYNERSNIGPLVEALDQQFATLAHDMHILVVDDNSPDGTAAEVRALQTRFPR
CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHCCE
LHLIEGRKAGLGAAYVRGMNHAMDALGADVVFEMDADFSHRPEDLPRLMAEIDRGADFVI
EEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEE
GSRYVKGGSIPANWGLMRRLNSLGGNIVARYVAGIYRVRDCTAGFRAIRCAVLRGIDFSR
ECEEECCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LRVQGYAFQVALLHAAVTNGARVVEIPVDFIDRTRGESKLGFADIMEFVWNAWWIRLQSS
EEEEHHHHHHHHHHHHHCCCCEEEEECHHHHHCCCCCCCCCHHHHHHHHHHHEEEEEECC
RVFIKFALVGLSGVAVNLGAFAAFLALGMNKFVASPLAIEVSIVSNFLLNNYWTFRWRKT
EEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCEEEEEEECC
RDRVRVKGLKFNVVSLVALGVSFSTFAAVSSLYPALPPWVPQLAGIPPAMLVNYFLNSYW
CCCEEEECEEEHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHCE
TFRHADAS
EEEECCCC
>Mature Secondary Structure
MKVVVIVPTYNERSNIGPLVEALDQQFATLAHDMHILVVDDNSPDGTAAEVRALQTRFPR
CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHCCE
LHLIEGRKAGLGAAYVRGMNHAMDALGADVVFEMDADFSHRPEDLPRLMAEIDRGADFVI
EEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEE
GSRYVKGGSIPANWGLMRRLNSLGGNIVARYVAGIYRVRDCTAGFRAIRCAVLRGIDFSR
ECEEECCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LRVQGYAFQVALLHAAVTNGARVVEIPVDFIDRTRGESKLGFADIMEFVWNAWWIRLQSS
EEEEHHHHHHHHHHHHHCCCCEEEEECHHHHHCCCCCCCCCHHHHHHHHHHHEEEEEECC
RVFIKFALVGLSGVAVNLGAFAAFLALGMNKFVASPLAIEVSIVSNFLLNNYWTFRWRKT
EEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCEEEEEEECC
RDRVRVKGLKFNVVSLVALGVSFSTFAAVSSLYPALPPWVPQLAGIPPAMLVNYFLNSYW
CCCEEEECEEEHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHCE
TFRHADAS
EEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA