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The map label for this gene is fecI [H]

Identifier: 119898664

GI number: 119898664

Start: 2612445

End: 2612945

Strand: Direct

Name: fecI [H]

Synonym: azo2373

Alternate gene names: 119898664

Gene position: 2612445-2612945 (Clockwise)

Preceding gene: 119898661

Following gene: 119898665

Centisome position: 59.7

GC content: 66.67

Gene sequence:

>501_bases
ATGCCTCCGTCAGCGGACTTGAACTTCGGCAACATCTACGGCACCCATCACAACTGGCTGCAGGGCTGGTTGCGGCGCAG
GCTGGGTTGCGCGCTCGACGCGGCCGATCTTGCCCACGATACGTTCCTGCGCGTACTGGCCGGGCGCGAATTGACCGACA
TCCGTGAGCCGCGCGCCTATCTCACCACCGTCGCCCACGGGCTGATGGTGAATCATCTGCGCCGCCGCGACATCGAGCGC
GCATGCCTGGACGCGCTCGCCAGCCTGCCGGAGCCCCTGGCGCCGAGCCCCGAGGCGCGCGCGCTGGCCGTTGAACTGCT
GCTGGAAATCGATGCGATGCTCGACGGCCTGTCCCGCAAGGCCCGCACTGCCTTCCTGTTATCGCAGCTGGAGGGGCTGA
CCTACGCCGAAATCGCGGAACAGCTGGGCGTTTCGGTCAGCATGGTGCGCAAGTACATGCTGCAGGCCATCACCCACTGC
CTGCAGATCCGGCAGGCGTGA

Upstream 100 bases:

>100_bases
CCCGTACCTGCGCATGACGCGCCGCTCGCACGCAGGAAATTTACATCGCACCCGTTACGGTTAGAATGCGAATGACTCGC
ATTACGTAAGAAACGATGCC

Downstream 100 bases:

>100_bases
GCATGGCGAGCCACGCTGCAATCCCCGCCGGTGACAAGGCCCACGTGCCCGCGGCGGCACTGGAGCAGGCTGCCGAGTGG
TTCGTGCTGCTGGCCTCCGG

Product: RNA polymerase ECF-subfamily sigma-70 factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MPPSADLNFGNIYGTHHNWLQGWLRRRLGCALDAADLAHDTFLRVLAGRELTDIREPRAYLTTVAHGLMVNHLRRRDIER
ACLDALASLPEPLAPSPEARALAVELLLEIDAMLDGLSRKARTAFLLSQLEGLTYAEIAEQLGVSVSMVRKYMLQAITHC
LQIRQA

Sequences:

>Translated_166_residues
MPPSADLNFGNIYGTHHNWLQGWLRRRLGCALDAADLAHDTFLRVLAGRELTDIREPRAYLTTVAHGLMVNHLRRRDIER
ACLDALASLPEPLAPSPEARALAVELLLEIDAMLDGLSRKARTAFLLSQLEGLTYAEIAEQLGVSVSMVRKYMLQAITHC
LQIRQA
>Mature_165_residues
PPSADLNFGNIYGTHHNWLQGWLRRRLGCALDAADLAHDTFLRVLAGRELTDIREPRAYLTTVAHGLMVNHLRRRDIERA
CLDALASLPEPLAPSPEARALAVELLLEIDAMLDGLSRKARTAFLLSQLEGLTYAEIAEQLGVSVSMVRKYMLQAITHCL
QIRQA

Specific function: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor regulates the fec genes for iron dicitrate transport (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma-70 factor family. ECF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790746, Length=161, Percent_Identity=54.0372670807453, Blast_Score=183, Evalue=6e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014284
- InterPro:   IPR000838
- InterPro:   IPR007627
- InterPro:   IPR013249
- InterPro:   IPR013325
- InterPro:   IPR013324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04542 Sigma70_r2; PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 18524; Mature: 18393

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPSADLNFGNIYGTHHNWLQGWLRRRLGCALDAADLAHDTFLRVLAGRELTDIREPRAY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LTTVAHGLMVNHLRRRDIERACLDALASLPEPLAPSPEARALAVELLLEIDAMLDGLSRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ARTAFLLSQLEGLTYAEIAEQLGVSVSMVRKYMLQAITHCLQIRQA
HHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PPSADLNFGNIYGTHHNWLQGWLRRRLGCALDAADLAHDTFLRVLAGRELTDIREPRAY
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LTTVAHGLMVNHLRRRDIERACLDALASLPEPLAPSPEARALAVELLLEIDAMLDGLSRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ARTAFLLSQLEGLTYAEIAEQLGVSVSMVRKYMLQAITHCLQIRQA
HHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254251; 7610040; 9278503; 8052622 [H]