| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is groEL3
Identifier: 119898657
GI number: 119898657
Start: 2606556
End: 2608199
Strand: Direct
Name: groEL3
Synonym: azo2366
Alternate gene names: 119898657
Gene position: 2606556-2608199 (Clockwise)
Preceding gene: 119898656
Following gene: 119898659
Centisome position: 59.56
GC content: 67.4
Gene sequence:
>1644_bases ATGGCCGCCAAACAAGTGCTTTTCGGTGACGACGCCCGCGCCAAGGTCGTGCAAGGCGTCAACATCCTCGCCAACGCCGT CAAGGTGACCCTCGGCCCCAAGGGCCGCAACGTGGTGCTGGAGCGCTCCTTCGGCGCGCCCACCGTGACCAAGGACGGCG TCTCGGTCGCCAAGGAAATCGAGCTGAAGGACAAGTTCGAGAACATCGGCGCGCAGCTGGTGAAGGAAGTCGCCTCCAAG ACCGCCGACAACGCCGGTGACGGCACCACCACCGCCACCGTGCTGGCCCAGGCCATCGTGCGCGAAGGCTTCAAGTTCGT CGCCGCCGGCTTCAACCCGGCCGACCTCAAGCGCGGCATCGACAAGGCGGTGGCCGCCATCGTCGACGAGCTGAAGGCCC TGTCCAAGCCGACCACCACCAGCAAGGAAATCGCCCAGGTCGGCGCCATTTCCGCCAATTCGGACGCCGACATCGGCGAC ATCATCGCCAAGGCCATCGACAAGGTGGGCAAGGAAGGCGTCATCACCGTCGAGGACGGCAAGTCGCTGAATAACGAACT CGACGTGGTCGAGGGTCTGCAGTTCGACCGCGGCTACCTGTCGCCCTACTTCATCAACAACCCGGACAAGCAGGTCGCCG AACTCGACAACCCCTTCATCCTGCTGTTCGACAAGAAGATCTCCAACATCCGCGAGCTGCTGCCGGTGCTGGAGCAGGTC GCCAAGGCCGGCAGCCCGCTGCTGGTCGTCGCCGAGGATGTCGACGGCGAAGCGCTCGCCACCCTGGTGGTGAACACCAT CCGCGGCATCCTCAAGGTGGTGGCGGTGAAGGCGCCGGGCTTCGGCGACCGCCGCAAGGCCATTCTGGAAGACATCGCCA TCCTCACCGGCGGCCAGGTGATCGCCGAGGAAGTCGGCCTCAGCCTGGAAAAGGCCACGCTCGCCGACCTCGGCCAGGCC AAGCGCGTCGAGGTGCAAAAGGAGAACACCACGCTGATCGACGGCGCCGGCAGTGTCGAGGCGATCAAGGCGCGCGTGTC CTCGATCGACGCCCTGATCGCCGCCGCCACTTCCGACTACGACCGCGAGAAGCTGCAGGAACGCAAGGCCAAGCTGGCTG GCGGCGTCGCCGTCATCAAGGTGGGCGCGGCCACCGAAGTGGAGCTGAAGGAGAAGAAGGCGCGCGTCGAGGATGCGCTG CATGCCACCCGCGCCGCGGTGGAAGAAGGCATCGTGCCCGGCGGCGGCGTCGCCCTGCTGCGCGCCCGTGCCGCGATCAA GGACCTGAAGGGCGACAACCACGAGCAGGACGCCGGCATCAAGATCGTGCTGCGCGCGGTGGAAGAGCCGCTGCGCCAGA TCGTCGCCAACGCCGGCGACGAGGCCTCGGTGGTGGTGGCCCGCGTGCTCGAAGGCAGCGGCAACTTCGGCTACAACGCC GCCAACGGCCAGTACGGCGATCTGGTGGAACAGGGCGTGCTGGACCCCGCCAAGGTCACCCGCTCCGCATTGCAGAACGC CGCCTCGGTCGCGGCGCTGATCCTCACCACTGACGCGCTGGTGGCCGAACAGGCGGACGACAAGCCGGCCACGGCCGGCC TGCCGCACGGCGGGCCGGGCGGGTTCGGCGGGCCGGAGTTCTAA
Upstream 100 bases:
>100_bases AAGTGCTCGTCGTGCGCGAAGAAGACATTTTCGGCGTCATCGAATAAGCCGCCGCCCCCGCCGCCTCAACTCATCCAACA CACAGCCAACGGAGCAATAC
Downstream 100 bases:
>100_bases GGCCGCGTCGAAAGCGGTCGCCCAAGGAGGAAATGCCCCGCATCCGCGGGGCATTTTTTTTTGGGGCCGCGCTATCAACC CGGCGCGTAGAGCCGCTCCA
Product: chaperonin GroEL
Products: NA
Alternate protein names: GroEL protein 2; Protein Cpn60 2
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MAAKQVLFGDDARAKVVQGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKFENIGAQLVKEVASK TADNAGDGTTTATVLAQAIVREGFKFVAAGFNPADLKRGIDKAVAAIVDELKALSKPTTTSKEIAQVGAISANSDADIGD IIAKAIDKVGKEGVITVEDGKSLNNELDVVEGLQFDRGYLSPYFINNPDKQVAELDNPFILLFDKKISNIRELLPVLEQV AKAGSPLLVVAEDVDGEALATLVVNTIRGILKVVAVKAPGFGDRRKAILEDIAILTGGQVIAEEVGLSLEKATLADLGQA KRVEVQKENTTLIDGAGSVEAIKARVSSIDALIAAATSDYDREKLQERKAKLAGGVAVIKVGAATEVELKEKKARVEDAL HATRAAVEEGIVPGGGVALLRARAAIKDLKGDNHEQDAGIKIVLRAVEEPLRQIVANAGDEASVVVARVLEGSGNFGYNA ANGQYGDLVEQGVLDPAKVTRSALQNAASVAALILTTDALVAEQADDKPATAGLPHGGPGGFGGPEF
Sequences:
>Translated_547_residues MAAKQVLFGDDARAKVVQGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKFENIGAQLVKEVASK TADNAGDGTTTATVLAQAIVREGFKFVAAGFNPADLKRGIDKAVAAIVDELKALSKPTTTSKEIAQVGAISANSDADIGD IIAKAIDKVGKEGVITVEDGKSLNNELDVVEGLQFDRGYLSPYFINNPDKQVAELDNPFILLFDKKISNIRELLPVLEQV AKAGSPLLVVAEDVDGEALATLVVNTIRGILKVVAVKAPGFGDRRKAILEDIAILTGGQVIAEEVGLSLEKATLADLGQA KRVEVQKENTTLIDGAGSVEAIKARVSSIDALIAAATSDYDREKLQERKAKLAGGVAVIKVGAATEVELKEKKARVEDAL HATRAAVEEGIVPGGGVALLRARAAIKDLKGDNHEQDAGIKIVLRAVEEPLRQIVANAGDEASVVVARVLEGSGNFGYNA ANGQYGDLVEQGVLDPAKVTRSALQNAASVAALILTTDALVAEQADDKPATAGLPHGGPGGFGGPEF >Mature_546_residues AAKQVLFGDDARAKVVQGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKFENIGAQLVKEVASKT ADNAGDGTTTATVLAQAIVREGFKFVAAGFNPADLKRGIDKAVAAIVDELKALSKPTTTSKEIAQVGAISANSDADIGDI IAKAIDKVGKEGVITVEDGKSLNNELDVVEGLQFDRGYLSPYFINNPDKQVAELDNPFILLFDKKISNIRELLPVLEQVA KAGSPLLVVAEDVDGEALATLVVNTIRGILKVVAVKAPGFGDRRKAILEDIAILTGGQVIAEEVGLSLEKATLADLGQAK RVEVQKENTTLIDGAGSVEAIKARVSSIDALIAAATSDYDREKLQERKAKLAGGVAVIKVGAATEVELKEKKARVEDALH ATRAAVEEGIVPGGGVALLRARAAIKDLKGDNHEQDAGIKIVLRAVEEPLRQIVANAGDEASVVVARVLEGSGNFGYNAA NGQYGDLVEQGVLDPAKVTRSALQNAASVAALILTTDALVAEQADDKPATAGLPHGGPGGFGGPEF
Specific function: Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
COG id: COG0459
COG function: function code O; Chaperonin GroEL (HSP60 family)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chaperonin (HSP60) family
Homologues:
Organism=Homo sapiens, GI41399285, Length=522, Percent_Identity=53.0651340996169, Blast_Score=531, Evalue=1e-151, Organism=Homo sapiens, GI31542947, Length=522, Percent_Identity=53.0651340996169, Blast_Score=531, Evalue=1e-151, Organism=Escherichia coli, GI1790586, Length=523, Percent_Identity=72.6577437858509, Blast_Score=754, Evalue=0.0, Organism=Caenorhabditis elegans, GI17555558, Length=523, Percent_Identity=51.2428298279159, Blast_Score=521, Evalue=1e-148, Organism=Caenorhabditis elegans, GI193210679, Length=205, Percent_Identity=50.2439024390244, Blast_Score=194, Evalue=8e-50, Organism=Caenorhabditis elegans, GI17532603, Length=575, Percent_Identity=22.2608695652174, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323288, Length=526, Percent_Identity=51.7110266159696, Blast_Score=536, Evalue=1e-153, Organism=Saccharomyces cerevisiae, GI6322524, Length=371, Percent_Identity=24.5283018867925, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641193, Length=522, Percent_Identity=51.9157088122605, Blast_Score=540, Evalue=1e-153, Organism=Drosophila melanogaster, GI24641191, Length=522, Percent_Identity=51.9157088122605, Blast_Score=540, Evalue=1e-153, Organism=Drosophila melanogaster, GI45550936, Length=522, Percent_Identity=50.3831417624521, Blast_Score=525, Evalue=1e-149, Organism=Drosophila melanogaster, GI45550132, Length=522, Percent_Identity=50.3831417624521, Blast_Score=525, Evalue=1e-149, Organism=Drosophila melanogaster, GI45550935, Length=522, Percent_Identity=50.3831417624521, Blast_Score=525, Evalue=1e-149, Organism=Drosophila melanogaster, GI17864606, Length=529, Percent_Identity=44.6124763705104, Blast_Score=462, Evalue=1e-130, Organism=Drosophila melanogaster, GI24584129, Length=525, Percent_Identity=38.0952380952381, Blast_Score=336, Evalue=2e-92, Organism=Drosophila melanogaster, GI19921262, Length=525, Percent_Identity=38.0952380952381, Blast_Score=336, Evalue=2e-92,
Paralogues:
None
Copy number: 2180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 15012 Molecules/Cell In: Growth Phase,
Swissprot (AC and ID): CH602_AZOSB (A1K828)
Other databases:
- EMBL: AM406670 - RefSeq: YP_933870.1 - ProteinModelPortal: A1K828 - SMR: A1K828 - STRING: A1K828 - GeneID: 4608941 - GenomeReviews: AM406670_GR - KEGG: azo:azo2366 - eggNOG: COG0459 - HOGENOM: HBG625289 - OMA: MAAKEIL - PhylomeDB: A1K828 - BioCyc: ASP62928:AZO2366-MONOMER - GO: GO:0005737 - HAMAP: MF_00600 - InterPro: IPR018370 - InterPro: IPR001844 - InterPro: IPR002423 - PANTHER: PTHR11353 - PRINTS: PR00298 - TIGRFAMs: TIGR02348
Pfam domain/function: PF00118 Cpn60_TCP1; SSF48592 GroEL-ATPase
EC number: NA
Molecular weight: Translated: 56951; Mature: 56819
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00296 CHAPERONINS_CPN60
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKQVLFGDDARAKVVQGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI CCCCCCEECCCHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHH ELKDKFENIGAQLVKEVASKTADNAGDGTTTATVLAQAIVREGFKFVAAGFNPADLKRGI HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHH DKAVAAIVDELKALSKPTTTSKEIAQVGAISANSDADIGDIIAKAIDKVGKEGVITVEDG HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCC KSLNNELDVVEGLQFDRGYLSPYFINNPDKQVAELDNPFILLFDKKISNIRELLPVLEQV CCCCCHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHH AKAGSPLLVVAEDVDGEALATLVVNTIRGILKVVAVKAPGFGDRRKAILEDIAILTGGQV HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH IAEEVGLSLEKATLADLGQAKRVEVQKENTTLIDGAGSVEAIKARVSSIDALIAAATSDY HHHHHCCCHHHHHHHHCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCH DREKLQERKAKLAGGVAVIKVGAATEVELKEKKARVEDALHATRAAVEEGIVPGGGVALL HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RARAAIKDLKGDNHEQDAGIKIVLRAVEEPLRQIVANAGDEASVVVARVLEGSGNFGYNA HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC ANGQYGDLVEQGVLDPAKVTRSALQNAASVAALILTTDALVAEQADDKPATAGLPHGGPG CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GFGGPEF CCCCCCC >Mature Secondary Structure AAKQVLFGDDARAKVVQGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI CCCCCEECCCHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHH ELKDKFENIGAQLVKEVASKTADNAGDGTTTATVLAQAIVREGFKFVAAGFNPADLKRGI HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHH DKAVAAIVDELKALSKPTTTSKEIAQVGAISANSDADIGDIIAKAIDKVGKEGVITVEDG HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCC KSLNNELDVVEGLQFDRGYLSPYFINNPDKQVAELDNPFILLFDKKISNIRELLPVLEQV CCCCCHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHH AKAGSPLLVVAEDVDGEALATLVVNTIRGILKVVAVKAPGFGDRRKAILEDIAILTGGQV HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH IAEEVGLSLEKATLADLGQAKRVEVQKENTTLIDGAGSVEAIKARVSSIDALIAAATSDY HHHHHCCCHHHHHHHHCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCH DREKLQERKAKLAGGVAVIKVGAATEVELKEKKARVEDALHATRAAVEEGIVPGGGVALL HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RARAAIKDLKGDNHEQDAGIKIVLRAVEEPLRQIVANAGDEASVVVARVLEGSGNFGYNA HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC ANGQYGDLVEQGVLDPAKVTRSALQNAASVAALILTTDALVAEQADDKPATAGLPHGGPG CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GFGGPEF CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA