Click here to switch to the map view.

The map label for this gene is cc41 [H]

Identifier: 119898633

GI number: 119898633

Start: 2579886

End: 2580566

Strand: Reverse

Name: cc41 [H]

Synonym: azo2342

Alternate gene names: 119898633

Gene position: 2580566-2579886 (Counterclockwise)

Preceding gene: 119898634

Following gene: 119898632

Centisome position: 58.97

GC content: 70.04

Gene sequence:

>681_bases
ATGTACGGGCATTCGGGGGGCGTTGCTCCCCTTTTTTTGTCACTCGCCTTCGTGGCGATGACGGGTAGCGCGTGGGCGCA
GGGCAACGAGGTGCTGCGCCACGGCAGTGGCGATCCCACGCTGGGCAAGCAGAGCAGCGAAGCCGAGTTGTGTCAGGAGT
GCCATGGCGCCGACGGCCGCGGCACCACCGCCGCCACGCCGAGGCTGGCGGGGCAGTTCGCCGCCTATCTGATCAAGCAG
GTGCGGGACTTCCGCAGCGGGGCGCGCAAGCACAGCGCGATGAGCGTGATCGCGCCCAATATCGCCGACGAGGATCTGGT
CGATATCGCAGCCTACTTCGCCCGGCAGGAAGCGCCGCCCGGACCGCATGCGAGTGCCGAGAGCGGCCTGCTGCCCGCTG
CAAGCCCCGCGGTGGCCAGGGCGCTGTTCGAACAAGGCGACGCCGCCCGCGGCATCCCCGCCTGCGCGGCCTGCCATGGG
CCGGATGCACGCGGCGCGGTGGCCGGCAACGTGATCAGCCCGGCGCTGCGCGGCCAGCAGCTCGCCTATCTGCGGGGACA
GATGGCGAGCTGGAAGCTCGGTGAGCGACGCAACGACGCCACCGGACAGATGAACGCGCTGGCGGCGAAGCTGAGTGCCG
AGGAGATCGAGGCGCTGGCCGAATACCTGTCGCGGCTGTAG

Upstream 100 bases:

>100_bases
GCTCGCCGCCGTGCGCTGAGCGGCGATCCGCGCCGTTCGGCCTTGCACCCCGGGTCGCAGGGCGACATGGGGCGCGTCAA
TCTCTTTCCAGGACATCCAG

Downstream 100 bases:

>100_bases
GCGCTGTTCCTCCTGCAGCAGCCGCGGCCGCGGCACTGCCTCGCAGCCAGCAGCGGCGTCCGGCGCCAGCCTCCGGACAA
GACCGGGCTGATCTTCCAAG

Product: putative cytochrome c4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MYGHSGGVAPLFLSLAFVAMTGSAWAQGNEVLRHGSGDPTLGKQSSEAELCQECHGADGRGTTAATPRLAGQFAAYLIKQ
VRDFRSGARKHSAMSVIAPNIADEDLVDIAAYFARQEAPPGPHASAESGLLPAASPAVARALFEQGDAARGIPACAACHG
PDARGAVAGNVISPALRGQQLAYLRGQMASWKLGERRNDATGQMNALAAKLSAEEIEALAEYLSRL

Sequences:

>Translated_226_residues
MYGHSGGVAPLFLSLAFVAMTGSAWAQGNEVLRHGSGDPTLGKQSSEAELCQECHGADGRGTTAATPRLAGQFAAYLIKQ
VRDFRSGARKHSAMSVIAPNIADEDLVDIAAYFARQEAPPGPHASAESGLLPAASPAVARALFEQGDAARGIPACAACHG
PDARGAVAGNVISPALRGQQLAYLRGQMASWKLGERRNDATGQMNALAAKLSAEEIEALAEYLSRL
>Mature_226_residues
MYGHSGGVAPLFLSLAFVAMTGSAWAQGNEVLRHGSGDPTLGKQSSEAELCQECHGADGRGTTAATPRLAGQFAAYLIKQ
VRDFRSGARKHSAMSVIAPNIADEDLVDIAAYFARQEAPPGPHASAESGLLPAASPAVARALFEQGDAARGIPACAACHG
PDARGAVAGNVISPALRGQQLAYLRGQMASWKLGERRNDATGQMNALAAKLSAEEIEALAEYLSRL

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 23453; Mature: 23453

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGHSGGVAPLFLSLAFVAMTGSAWAQGNEVLRHGSGDPTLGKQSSEAELCQECHGADGR
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCC
GTTAATPRLAGQFAAYLIKQVRDFRSGARKHSAMSVIAPNIADEDLVDIAAYFARQEAPP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
GPHASAESGLLPAASPAVARALFEQGDAARGIPACAACHGPDARGAVAGNVISPALRGQQ
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHCHHHHHHHCCHH
LAYLRGQMASWKLGERRNDATGQMNALAAKLSAEEIEALAEYLSRL
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYGHSGGVAPLFLSLAFVAMTGSAWAQGNEVLRHGSGDPTLGKQSSEAELCQECHGADGR
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCC
GTTAATPRLAGQFAAYLIKQVRDFRSGARKHSAMSVIAPNIADEDLVDIAAYFARQEAPP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
GPHASAESGLLPAASPAVARALFEQGDAARGIPACAACHGPDARGAVAGNVISPALRGQQ
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHCHHHHHHHCCHH
LAYLRGQMASWKLGERRNDATGQMNALAAKLSAEEIEALAEYLSRL
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]