| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yufP [H]
Identifier: 119898506
GI number: 119898506
Start: 2428310
End: 2429374
Strand: Direct
Name: yufP [H]
Synonym: azo2215
Alternate gene names: 119898506
Gene position: 2428310-2429374 (Clockwise)
Preceding gene: 119898505
Following gene: 119898507
Centisome position: 55.49
GC content: 69.01
Gene sequence:
>1065_bases ATGCTGCGGCTTGAGGCCCGCGCCACCGCGTCGCCGGCAATGCGCTATGTGTCGCCGCTGATCGCGATCGTGCTGACGCT GGTCACCGGCGCCGCGCTGTTCGCGCTGCTCGGCAAGGACCCGGGCGAGGGTCTGCGGCTCTTTCTGCTGAACCCGCTGA AGGACCTCTACGGCATCTCCGAACTGCTGTTGAAAGCCACGCCGCTGATGCTGTGCGCGCTTGGGCTGGCGATCGGCTTT CGCGCAAACGTCTGGAACATCGGCGCGGAAGGCCAGTTTCTGCTCGGCGCGGTCGGCGCCAGCGGCGTGGCGCTGTACTT CCAGGACAGCGACAGCGCGCTGGTGCTGCCCGCCATGGTGCTGGCCGGCGGCGCCGCGGGGGCGGGCTGGGCGGCGATTC CCGCCTGGCTGCGCACCCGCTACGAGGCCAGCGAGATCCTCGTCTCGCTGATGCTGGTCTATATCGCCCAACTGTTCGTG TCCTGGCTGGTATTCGGGCCGTGGAAGGACCCGCAGGGCTTCAACTTTCCGCAGAGCGCGATGTTCGGCGACCACGCGCT GCTTCCGCCGCTGATCGAAGGCACGCGCCTGCACGTGGGATTGCTGTTTGCGCTGGGCGCACTCGTGGCGGGCCACGTGC TGATGAACCGCAGCTATCTCGGCTTTCGGCTGCAGGTGGCGGGCGAGGCGCCGGCCGCGGCGCGCTATGCGGGTTTTTCG CGCGCGCGGGCGGTGTGGATAGGCCTGCTCGCCGGCGGCGCCACGGCCGGCCTTGCCGGCATGGGCGAAGTCGCCGGGCC GCTCGGCCAGCTCACCGACAAGGTCGGCTCCGGCTACGGTTTCGCCGCAATCATCGTCGCCTTCGTCGGCCGCCTGCACG CGGTGGGCATCGCCCTCGCCAGTCTGCTGATGGCGCTGCTCTACATCGGTGGCGAGCAGGTGCAGCAGTACATGAACCTG CCGAATTCGATCGCGCTGGTATTCCAGGGCCTGCTGCTGTTCTTCCTGCTCGGCGCCGACGTGCTGATCCACTACCGCCT GCGGCTCGGCCGCCGGACTGGCTGA
Upstream 100 bases:
>100_bases CTGCGGCTGGTGCGCGACACCTCGATGGAGGAAGTGGGCCTGTGGATGAGCGGCCTGTGGCCGGGCGCCGACGCCGGCGC CGTTGCCGGCGGGGGGCGCC
Downstream 100 bases:
>100_bases CGATGGACGGCGCGACCCTGGCCCCGATCCTGTTCGCCACCGTGGTGGCCGGCACGCCGCTGGTGCTCGTTGCGCTCGGG CTGCTGGTGAACGAACGTGC
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MLRLEARATASPAMRYVSPLIAIVLTLVTGAALFALLGKDPGEGLRLFLLNPLKDLYGISELLLKATPLMLCALGLAIGF RANVWNIGAEGQFLLGAVGASGVALYFQDSDSALVLPAMVLAGGAAGAGWAAIPAWLRTRYEASEILVSLMLVYIAQLFV SWLVFGPWKDPQGFNFPQSAMFGDHALLPPLIEGTRLHVGLLFALGALVAGHVLMNRSYLGFRLQVAGEAPAAARYAGFS RARAVWIGLLAGGATAGLAGMGEVAGPLGQLTDKVGSGYGFAAIIVAFVGRLHAVGIALASLLMALLYIGGEQVQQYMNL PNSIALVFQGLLLFFLLGADVLIHYRLRLGRRTG
Sequences:
>Translated_354_residues MLRLEARATASPAMRYVSPLIAIVLTLVTGAALFALLGKDPGEGLRLFLLNPLKDLYGISELLLKATPLMLCALGLAIGF RANVWNIGAEGQFLLGAVGASGVALYFQDSDSALVLPAMVLAGGAAGAGWAAIPAWLRTRYEASEILVSLMLVYIAQLFV SWLVFGPWKDPQGFNFPQSAMFGDHALLPPLIEGTRLHVGLLFALGALVAGHVLMNRSYLGFRLQVAGEAPAAARYAGFS RARAVWIGLLAGGATAGLAGMGEVAGPLGQLTDKVGSGYGFAAIIVAFVGRLHAVGIALASLLMALLYIGGEQVQQYMNL PNSIALVFQGLLLFFLLGADVLIHYRLRLGRRTG >Mature_354_residues MLRLEARATASPAMRYVSPLIAIVLTLVTGAALFALLGKDPGEGLRLFLLNPLKDLYGISELLLKATPLMLCALGLAIGF RANVWNIGAEGQFLLGAVGASGVALYFQDSDSALVLPAMVLAGGAAGAGWAAIPAWLRTRYEASEILVSLMLVYIAQLFV SWLVFGPWKDPQGFNFPQSAMFGDHALLPPLIEGTRLHVGLLFALGALVAGHVLMNRSYLGFRLQVAGEAPAAARYAGFS RARAVWIGLLAGGATAGLAGMGEVAGPLGQLTDKVGSGYGFAAIIVAFVGRLHAVGIALASLLMALLYIGGEQVQQYMNL PNSIALVFQGLLLFFLLGADVLIHYRLRLGRRTG
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4603
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR002229 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 37276; Mature: 37276
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLEARATASPAMRYVSPLIAIVLTLVTGAALFALLGKDPGEGLRLFLLNPLKDLYGIS CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHH ELLLKATPLMLCALGLAIGFRANVWNIGAEGQFLLGAVGASGVALYFQDSDSALVLPAMV HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHH LAGGAAGAGWAAIPAWLRTRYEASEILVSLMLVYIAQLFVSWLVFGPWKDPQGFNFPQSA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH MFGDHALLPPLIEGTRLHVGLLFALGALVAGHVLMNRSYLGFRLQVAGEAPAAARYAGFS HCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH RARAVWIGLLAGGATAGLAGMGEVAGPLGQLTDKVGSGYGFAAIIVAFVGRLHAVGIALA HHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH SLLMALLYIGGEQVQQYMNLPNSIALVFQGLLLFFLLGADVLIHYRLRLGRRTG HHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLRLEARATASPAMRYVSPLIAIVLTLVTGAALFALLGKDPGEGLRLFLLNPLKDLYGIS CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHH ELLLKATPLMLCALGLAIGFRANVWNIGAEGQFLLGAVGASGVALYFQDSDSALVLPAMV HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHH LAGGAAGAGWAAIPAWLRTRYEASEILVSLMLVYIAQLFVSWLVFGPWKDPQGFNFPQSA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH MFGDHALLPPLIEGTRLHVGLLFALGALVAGHVLMNRSYLGFRLQVAGEAPAAARYAGFS HCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH RARAVWIGLLAGGATAGLAGMGEVAGPLGQLTDKVGSGYGFAAIIVAFVGRLHAVGIALA HHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH SLLMALLYIGGEQVQQYMNLPNSIALVFQGLLLFFLLGADVLIHYRLRLGRRTG HHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]