Definition Azoarcus sp. BH72 chromosome, complete genome.
Accession NC_008702
Length 4,376,040

Click here to switch to the map view.

The map label for this gene is yufP [H]

Identifier: 119898506

GI number: 119898506

Start: 2428310

End: 2429374

Strand: Direct

Name: yufP [H]

Synonym: azo2215

Alternate gene names: 119898506

Gene position: 2428310-2429374 (Clockwise)

Preceding gene: 119898505

Following gene: 119898507

Centisome position: 55.49

GC content: 69.01

Gene sequence:

>1065_bases
ATGCTGCGGCTTGAGGCCCGCGCCACCGCGTCGCCGGCAATGCGCTATGTGTCGCCGCTGATCGCGATCGTGCTGACGCT
GGTCACCGGCGCCGCGCTGTTCGCGCTGCTCGGCAAGGACCCGGGCGAGGGTCTGCGGCTCTTTCTGCTGAACCCGCTGA
AGGACCTCTACGGCATCTCCGAACTGCTGTTGAAAGCCACGCCGCTGATGCTGTGCGCGCTTGGGCTGGCGATCGGCTTT
CGCGCAAACGTCTGGAACATCGGCGCGGAAGGCCAGTTTCTGCTCGGCGCGGTCGGCGCCAGCGGCGTGGCGCTGTACTT
CCAGGACAGCGACAGCGCGCTGGTGCTGCCCGCCATGGTGCTGGCCGGCGGCGCCGCGGGGGCGGGCTGGGCGGCGATTC
CCGCCTGGCTGCGCACCCGCTACGAGGCCAGCGAGATCCTCGTCTCGCTGATGCTGGTCTATATCGCCCAACTGTTCGTG
TCCTGGCTGGTATTCGGGCCGTGGAAGGACCCGCAGGGCTTCAACTTTCCGCAGAGCGCGATGTTCGGCGACCACGCGCT
GCTTCCGCCGCTGATCGAAGGCACGCGCCTGCACGTGGGATTGCTGTTTGCGCTGGGCGCACTCGTGGCGGGCCACGTGC
TGATGAACCGCAGCTATCTCGGCTTTCGGCTGCAGGTGGCGGGCGAGGCGCCGGCCGCGGCGCGCTATGCGGGTTTTTCG
CGCGCGCGGGCGGTGTGGATAGGCCTGCTCGCCGGCGGCGCCACGGCCGGCCTTGCCGGCATGGGCGAAGTCGCCGGGCC
GCTCGGCCAGCTCACCGACAAGGTCGGCTCCGGCTACGGTTTCGCCGCAATCATCGTCGCCTTCGTCGGCCGCCTGCACG
CGGTGGGCATCGCCCTCGCCAGTCTGCTGATGGCGCTGCTCTACATCGGTGGCGAGCAGGTGCAGCAGTACATGAACCTG
CCGAATTCGATCGCGCTGGTATTCCAGGGCCTGCTGCTGTTCTTCCTGCTCGGCGCCGACGTGCTGATCCACTACCGCCT
GCGGCTCGGCCGCCGGACTGGCTGA

Upstream 100 bases:

>100_bases
CTGCGGCTGGTGCGCGACACCTCGATGGAGGAAGTGGGCCTGTGGATGAGCGGCCTGTGGCCGGGCGCCGACGCCGGCGC
CGTTGCCGGCGGGGGGCGCC

Downstream 100 bases:

>100_bases
CGATGGACGGCGCGACCCTGGCCCCGATCCTGTTCGCCACCGTGGTGGCCGGCACGCCGCTGGTGCTCGTTGCGCTCGGG
CTGCTGGTGAACGAACGTGC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MLRLEARATASPAMRYVSPLIAIVLTLVTGAALFALLGKDPGEGLRLFLLNPLKDLYGISELLLKATPLMLCALGLAIGF
RANVWNIGAEGQFLLGAVGASGVALYFQDSDSALVLPAMVLAGGAAGAGWAAIPAWLRTRYEASEILVSLMLVYIAQLFV
SWLVFGPWKDPQGFNFPQSAMFGDHALLPPLIEGTRLHVGLLFALGALVAGHVLMNRSYLGFRLQVAGEAPAAARYAGFS
RARAVWIGLLAGGATAGLAGMGEVAGPLGQLTDKVGSGYGFAAIIVAFVGRLHAVGIALASLLMALLYIGGEQVQQYMNL
PNSIALVFQGLLLFFLLGADVLIHYRLRLGRRTG

Sequences:

>Translated_354_residues
MLRLEARATASPAMRYVSPLIAIVLTLVTGAALFALLGKDPGEGLRLFLLNPLKDLYGISELLLKATPLMLCALGLAIGF
RANVWNIGAEGQFLLGAVGASGVALYFQDSDSALVLPAMVLAGGAAGAGWAAIPAWLRTRYEASEILVSLMLVYIAQLFV
SWLVFGPWKDPQGFNFPQSAMFGDHALLPPLIEGTRLHVGLLFALGALVAGHVLMNRSYLGFRLQVAGEAPAAARYAGFS
RARAVWIGLLAGGATAGLAGMGEVAGPLGQLTDKVGSGYGFAAIIVAFVGRLHAVGIALASLLMALLYIGGEQVQQYMNL
PNSIALVFQGLLLFFLLGADVLIHYRLRLGRRTG
>Mature_354_residues
MLRLEARATASPAMRYVSPLIAIVLTLVTGAALFALLGKDPGEGLRLFLLNPLKDLYGISELLLKATPLMLCALGLAIGF
RANVWNIGAEGQFLLGAVGASGVALYFQDSDSALVLPAMVLAGGAAGAGWAAIPAWLRTRYEASEILVSLMLVYIAQLFV
SWLVFGPWKDPQGFNFPQSAMFGDHALLPPLIEGTRLHVGLLFALGALVAGHVLMNRSYLGFRLQVAGEAPAAARYAGFS
RARAVWIGLLAGGATAGLAGMGEVAGPLGQLTDKVGSGYGFAAIIVAFVGRLHAVGIALASLLMALLYIGGEQVQQYMNL
PNSIALVFQGLLLFFLLGADVLIHYRLRLGRRTG

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 37276; Mature: 37276

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLEARATASPAMRYVSPLIAIVLTLVTGAALFALLGKDPGEGLRLFLLNPLKDLYGIS
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHH
ELLLKATPLMLCALGLAIGFRANVWNIGAEGQFLLGAVGASGVALYFQDSDSALVLPAMV
HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHH
LAGGAAGAGWAAIPAWLRTRYEASEILVSLMLVYIAQLFVSWLVFGPWKDPQGFNFPQSA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
MFGDHALLPPLIEGTRLHVGLLFALGALVAGHVLMNRSYLGFRLQVAGEAPAAARYAGFS
HCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH
RARAVWIGLLAGGATAGLAGMGEVAGPLGQLTDKVGSGYGFAAIIVAFVGRLHAVGIALA
HHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
SLLMALLYIGGEQVQQYMNLPNSIALVFQGLLLFFLLGADVLIHYRLRLGRRTG
HHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLRLEARATASPAMRYVSPLIAIVLTLVTGAALFALLGKDPGEGLRLFLLNPLKDLYGIS
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHH
ELLLKATPLMLCALGLAIGFRANVWNIGAEGQFLLGAVGASGVALYFQDSDSALVLPAMV
HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHH
LAGGAAGAGWAAIPAWLRTRYEASEILVSLMLVYIAQLFVSWLVFGPWKDPQGFNFPQSA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
MFGDHALLPPLIEGTRLHVGLLFALGALVAGHVLMNRSYLGFRLQVAGEAPAAARYAGFS
HCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH
RARAVWIGLLAGGATAGLAGMGEVAGPLGQLTDKVGSGYGFAAIIVAFVGRLHAVGIALA
HHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
SLLMALLYIGGEQVQQYMNLPNSIALVFQGLLLFFLLGADVLIHYRLRLGRRTG
HHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]