| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is ydiA [C]
Identifier: 119898459
GI number: 119898459
Start: 2376269
End: 2377102
Strand: Direct
Name: ydiA [C]
Synonym: azo2168
Alternate gene names: 119898459
Gene position: 2376269-2377102 (Clockwise)
Preceding gene: 119898454
Following gene: 119898460
Centisome position: 54.3
GC content: 63.31
Gene sequence:
>834_bases ATGAGCACACTTCCAATCCGCACTGTTTTCTTCATCTCGGACGGCACCGGCATTACCGCCGAAACGCTCGGGCACAGTCT TCTGGCGCAGTTCCCCGAGGCCCGTATCCGCCAGGTGCGCGCGCCCTTCATCGACGATCTCGACAAGGCCATCGACTGCG CCAACCAGATCCGCGAAGCAGCCCGCAACGACGGCGTCCGCCCCATCGTGTTCAGCACCCTGGTCAGCCCGGAAACCGTC GAAGCCCTGCACAAGGCCGACGCCCTGTTCCTCGATCTGTTCGATCGCTTCATCGGGCCGCTTGAAACCGAACTCGGCCA GCGCTCTACCCATACCGTCGGGCGCTTCCATGGCATCGCCGACAGCCTCGACTACAAGAATCGCATCGAGGCGATCAACT TTGCGATGGCGCACGACGACGGCGTCTCCTCGGACGGCGAACTCGCCGAGGCCGACGTGATCCTGGTCGGGGTCTCGCGC TCCGGCAAGACCCCGACGAGCCTCTATCTGGCGATGCAGTTCGGCGTAAAGGCGGCCAACTATCCTCTGATCCCCGAAGA CTTCGAGCGCAACAAGCTGCCGGGGGAACTCCACAACTACCGCGGCAAGCTGTTCGGCCTCACGATCGCACCCGAACGCC TGTCGCAGATCCGTCAGGAACGACGCCCCAACAGCCGCTACGCCTCGCTCGACAACTGCAAGTACGAGATCGACGCCGCG CAGAAACTGATGCGGCGCGAGAACATCCGCTGGCTGGACTCCACGACCAAGTCCATCGAGGAAATCTCCGCCACCATCCT GCAGTCGGTGCGGCTCAATCGGCCCGGCTACTGA
Upstream 100 bases:
>100_bases CTGCACCGCACGGCAGGGTTTGCCCCAATACCCGCCTTGAGGGTGCGCCGGACGGATCCCCAGACCCTCCCCCCTGACCG TCCAGCCCCGGAAAGCGACG
Downstream 100 bases:
>100_bases GCGGACTAGAATGAATCACCCCCGCTGCCGGGGGCGCCGGATGCACGGCGACACAACGGAATGAATTCGATGAAACGTAC GCGCCTCAAGCGCCGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSTLPIRTVFFISDGTGITAETLGHSLLAQFPEARIRQVRAPFIDDLDKAIDCANQIREAARNDGVRPIVFSTLVSPETV EALHKADALFLDLFDRFIGPLETELGQRSTHTVGRFHGIADSLDYKNRIEAINFAMAHDDGVSSDGELAEADVILVGVSR SGKTPTSLYLAMQFGVKAANYPLIPEDFERNKLPGELHNYRGKLFGLTIAPERLSQIRQERRPNSRYASLDNCKYEIDAA QKLMRRENIRWLDSTTKSIEEISATILQSVRLNRPGY
Sequences:
>Translated_277_residues MSTLPIRTVFFISDGTGITAETLGHSLLAQFPEARIRQVRAPFIDDLDKAIDCANQIREAARNDGVRPIVFSTLVSPETV EALHKADALFLDLFDRFIGPLETELGQRSTHTVGRFHGIADSLDYKNRIEAINFAMAHDDGVSSDGELAEADVILVGVSR SGKTPTSLYLAMQFGVKAANYPLIPEDFERNKLPGELHNYRGKLFGLTIAPERLSQIRQERRPNSRYASLDNCKYEIDAA QKLMRRENIRWLDSTTKSIEEISATILQSVRLNRPGY >Mature_276_residues STLPIRTVFFISDGTGITAETLGHSLLAQFPEARIRQVRAPFIDDLDKAIDCANQIREAARNDGVRPIVFSTLVSPETVE ALHKADALFLDLFDRFIGPLETELGQRSTHTVGRFHGIADSLDYKNRIEAINFAMAHDDGVSSDGELAEADVILVGVSRS GKTPTSLYLAMQFGVKAANYPLIPEDFERNKLPGELHNYRGKLFGLTIAPERLSQIRQERRPNSRYASLDNCKYEIDAAQ KLMRRENIRWLDSTTKSIEEISATILQSVRLNRPGY
Specific function: Unknown
COG id: COG1806
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family
Homologues:
Organism=Escherichia coli, GI1787995, Length=273, Percent_Identity=46.1538461538462, Blast_Score=239, Evalue=1e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2168_AZOSB (A1K7I0)
Other databases:
- EMBL: AM406670 - RefSeq: YP_933672.1 - STRING: A1K7I0 - GeneID: 4609615 - GenomeReviews: AM406670_GR - KEGG: azo:azo2168 - eggNOG: COG1806 - HOGENOM: HBG304855 - OMA: DAINYAM - PhylomeDB: A1K7I0 - ProtClustDB: PRK05339 - BioCyc: ASP62928:AZO2168-MONOMER - HAMAP: MF_01062 - InterPro: IPR005177
Pfam domain/function: PF03618 DUF299
EC number: NA
Molecular weight: Translated: 31008; Mature: 30876
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLPIRTVFFISDGTGITAETLGHSLLAQFPEARIRQVRAPFIDDLDKAIDCANQIREA CCCCCEEEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHH ARNDGVRPIVFSTLVSPETVEALHKADALFLDLFDRFIGPLETELGQRSTHTVGRFHGIA HHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHH DSLDYKNRIEAINFAMAHDDGVSSDGELAEADVILVGVSRSGKTPTSLYLAMQFGVKAAN HHCCHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHEEEHHHHCCCCCC YPLIPEDFERNKLPGELHNYRGKLFGLTIAPERLSQIRQERRPNSRYASLDNCKYEIDAA CCCCCCCCCCCCCCCHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCEEHHHHH QKLMRRENIRWLDSTTKSIEEISATILQSVRLNRPGY HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STLPIRTVFFISDGTGITAETLGHSLLAQFPEARIRQVRAPFIDDLDKAIDCANQIREA CCCCEEEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHH ARNDGVRPIVFSTLVSPETVEALHKADALFLDLFDRFIGPLETELGQRSTHTVGRFHGIA HHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHH DSLDYKNRIEAINFAMAHDDGVSSDGELAEADVILVGVSRSGKTPTSLYLAMQFGVKAAN HHCCHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHEEEHHHHCCCCCC YPLIPEDFERNKLPGELHNYRGKLFGLTIAPERLSQIRQERRPNSRYASLDNCKYEIDAA CCCCCCCCCCCCCCCHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCEEHHHHH QKLMRRENIRWLDSTTKSIEEISATILQSVRLNRPGY HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA