| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is arnT [H]
Identifier: 119898453
GI number: 119898453
Start: 2369350
End: 2370978
Strand: Direct
Name: arnT [H]
Synonym: azo2162
Alternate gene names: 119898453
Gene position: 2369350-2370978 (Clockwise)
Preceding gene: 119898452
Following gene: 119898454
Centisome position: 54.14
GC content: 68.45
Gene sequence:
>1629_bases ATGAGTCCGTCGAACCCCCGCGAGCGCGCCATTGGTGCGCTCAGCCTGCTGCTGCCACTGCTCAGCTTCTTCCTCTGCCT CGGCGCGTTCCCGCTGTTCGATGTCGACGAGGGCGCCTTCTCGGAAGCCACCCGCGAGATGTTCGAGCGCGGCGACTTCC TGTCGACCTACCTCAACGGCGAGCACCGGTTCGACAAGCCCATCCTGATCTACTGGCTGCAGGCGCTCGGTTTCCTGCTG TTCGGCGCCAGCGAATGGGCGTTCAGGCTGCCGTCTGCGGTGGCCGCGGTGTGCTGGAGCTACGCCACCTGGCAGTTCGT GCGTGAGCGTTTCGGCAGCGACACGGCGCTTGCCGCACTCACAGTCGCCGCCACCGCACTCGGCCCGTTCGCGATCGGCC GTGCAGCCACGGCGGACGCCCTGCTCAACCTGCTGCTCGCGCTGGCCTTGTTCGACGCCTGGCGCCATCTGGAAAGCGGT CGGCGCGCGCCGCTGCTGCGCAGCTATGTCTGGATCGGCCTCGGAGTGCTCACGAAAGGCCCGATTGCGCTGATCGTGCC GGGCGCGGTCACCTTCCTGTACTGCGCCAGCCGGCTGGAGTGGCAACGCTGGCTGAAGTCGGTGTTCGATCCTCTCGGCT GGGCGATTCTCGCCGTGCTGACGGTGCCCTGGTACGCCGCCGCACTCGCCATCCACGGCCAGGCCTTCATCGACGGGTTC ATCCTCAAGCACAACGTCGAACGCTTCACCGGCACGCTCGAAGGACACGCCGGCAGCCTGTTCTACTACGTGTTCGCGGT GCCCTTGCTGATGTTGCCCTGGACCGGACCGCTTCTCGCGTCGCTGCGCAAGATCCGCAGCGACACGGGTACCGGTGTGC GCCGCTTCCTGTGGATCTGGGCGCTGTTCGTGATCGGCTTCTTTTCGGTTTCCGGCACCAAGCTTCCCCATTACGTGCTG TACGGCTCCACCCCGCTCTTCGTGCTGATCGCCTGCCATCGCGACCTGTTGCGCGGCCGCTGGGCTCACCTTGCCGCCCC CACGCTGCTGCTCGCGGCGCTGGCTGCCTTGCCCCTGGTGTTCCAGGCGCTCTCGCAGAGCGAAGCGGGCAACGCCTACT ATCGCGCCCAGTTGGCTCGCTCCCTCGAGTTGGCCGGCCCTGCCTACTACGGCGTTACGCTGCTTGCGCTCGCAGCGTGG CTGGTGGTCGCACTCCGGCCCGCAATCCCGCTGTGGCGAAGCCTGTCTGTGGCGGCGGTGCTGCAGGTGCTGGTACTGAC CACCACCGTGGTGCCTTGGGCCGGCGCGGTGCTGCAAGGGCCGGTGAAAGCAGCGGCGGCCGAAGCGCGTCGGCTCGGCG GCCCCGTCGTGGCGTGGCGTCTCGACACGCCTAGCTTCAGTGTCTATCGCGAAGCGGTCACCCCCTCGCGCGAGCCCCTG CCGGGCGAAATCGCCCTGACCCGCCTCGACCGGGTGCCGGCCAGCGGCTATGAGTTGCTGTTCCGCCAGGGTGGCGTGGT ACTGGTCCGGCGCCAGCAGCAGGTGGAGACGCCCTCCGCCCCCGCCGAGACCAGCGCGCTTCCCGCCGTCGACGCCCCGG CGCCCGAAGACCGGAATCCCAGCCAATGA
Upstream 100 bases:
>100_bases TCGCCCGGGTCTATTACGAATCGGGCAGTACCCGGGCCTATCTTGCCCGTCCGGCGGAAGAGCTGGCGGCCGACCAGGGC TGGCATCGCACCGAGCGCGC
Downstream 100 bases:
>100_bases GCGCGCCGTCCTGTCCGGGCTCCGCGCCCTCGCCCGCCAGCACACGCCCCGTCGAACCGCTGACGCTGATCATCATGGCA ACGCTGTTGCTGTGCGCGGG
Product: glycosyltransferases
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MSPSNPRERAIGALSLLLPLLSFFLCLGAFPLFDVDEGAFSEATREMFERGDFLSTYLNGEHRFDKPILIYWLQALGFLL FGASEWAFRLPSAVAAVCWSYATWQFVRERFGSDTALAALTVAATALGPFAIGRAATADALLNLLLALALFDAWRHLESG RRAPLLRSYVWIGLGVLTKGPIALIVPGAVTFLYCASRLEWQRWLKSVFDPLGWAILAVLTVPWYAAALAIHGQAFIDGF ILKHNVERFTGTLEGHAGSLFYYVFAVPLLMLPWTGPLLASLRKIRSDTGTGVRRFLWIWALFVIGFFSVSGTKLPHYVL YGSTPLFVLIACHRDLLRGRWAHLAAPTLLLAALAALPLVFQALSQSEAGNAYYRAQLARSLELAGPAYYGVTLLALAAW LVVALRPAIPLWRSLSVAAVLQVLVLTTTVVPWAGAVLQGPVKAAAAEARRLGGPVVAWRLDTPSFSVYREAVTPSREPL PGEIALTRLDRVPASGYELLFRQGGVVLVRRQQQVETPSAPAETSALPAVDAPAPEDRNPSQ
Sequences:
>Translated_542_residues MSPSNPRERAIGALSLLLPLLSFFLCLGAFPLFDVDEGAFSEATREMFERGDFLSTYLNGEHRFDKPILIYWLQALGFLL FGASEWAFRLPSAVAAVCWSYATWQFVRERFGSDTALAALTVAATALGPFAIGRAATADALLNLLLALALFDAWRHLESG RRAPLLRSYVWIGLGVLTKGPIALIVPGAVTFLYCASRLEWQRWLKSVFDPLGWAILAVLTVPWYAAALAIHGQAFIDGF ILKHNVERFTGTLEGHAGSLFYYVFAVPLLMLPWTGPLLASLRKIRSDTGTGVRRFLWIWALFVIGFFSVSGTKLPHYVL YGSTPLFVLIACHRDLLRGRWAHLAAPTLLLAALAALPLVFQALSQSEAGNAYYRAQLARSLELAGPAYYGVTLLALAAW LVVALRPAIPLWRSLSVAAVLQVLVLTTTVVPWAGAVLQGPVKAAAAEARRLGGPVVAWRLDTPSFSVYREAVTPSREPL PGEIALTRLDRVPASGYELLFRQGGVVLVRRQQQVETPSAPAETSALPAVDAPAPEDRNPSQ >Mature_541_residues SPSNPRERAIGALSLLLPLLSFFLCLGAFPLFDVDEGAFSEATREMFERGDFLSTYLNGEHRFDKPILIYWLQALGFLLF GASEWAFRLPSAVAAVCWSYATWQFVRERFGSDTALAALTVAATALGPFAIGRAATADALLNLLLALALFDAWRHLESGR RAPLLRSYVWIGLGVLTKGPIALIVPGAVTFLYCASRLEWQRWLKSVFDPLGWAILAVLTVPWYAAALAIHGQAFIDGFI LKHNVERFTGTLEGHAGSLFYYVFAVPLLMLPWTGPLLASLRKIRSDTGTGVRRFLWIWALFVIGFFSVSGTKLPHYVLY GSTPLFVLIACHRDLLRGRWAHLAAPTLLLAALAALPLVFQALSQSEAGNAYYRAQLARSLELAGPAYYGVTLLALAAWL VVALRPAIPLWRSLSVAAVLQVLVLTTTVVPWAGAVLQGPVKAAAAEARRLGGPVVAWRLDTPSFSVYREAVTPSREPLP GEIALTRLDRVPASGYELLFRQGGVVLVRRQQQVETPSAPAETSALPAVDAPAPEDRNPSQ
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=342, Percent_Identity=28.9473684210526, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 59147; Mature: 59015
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSNPRERAIGALSLLLPLLSFFLCLGAFPLFDVDEGAFSEATREMFERGDFLSTYLNG CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCC EHRFDKPILIYWLQALGFLLFGASEWAFRLPSAVAAVCWSYATWQFVRERFGSDTALAAL CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH TVAATALGPFAIGRAATADALLNLLLALALFDAWRHLESGRRAPLLRSYVWIGLGVLTKG HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC PIALIVPGAVTFLYCASRLEWQRWLKSVFDPLGWAILAVLTVPWYAAALAIHGQAFIDGF CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ILKHNVERFTGTLEGHAGSLFYYVFAVPLLMLPWTGPLLASLRKIRSDTGTGVRRFLWIW HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHH ALFVIGFFSVSGTKLPHYVLYGSTPLFVLIACHRDLLRGRWAHLAAPTLLLAALAALPLV HHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH FQALSQSEAGNAYYRAQLARSLELAGPAYYGVTLLALAAWLVVALRPAIPLWRSLSVAAV HHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LQVLVLTTTVVPWAGAVLQGPVKAAAAEARRLGGPVVAWRLDTPSFSVYREAVTPSREPL HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCCC PGEIALTRLDRVPASGYELLFRQGGVVLVRRQQQVETPSAPAETSALPAVDAPAPEDRNP CCHHHHHHHHCCCCCHHHHHHHCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SQ CC >Mature Secondary Structure SPSNPRERAIGALSLLLPLLSFFLCLGAFPLFDVDEGAFSEATREMFERGDFLSTYLNG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCC EHRFDKPILIYWLQALGFLLFGASEWAFRLPSAVAAVCWSYATWQFVRERFGSDTALAAL CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH TVAATALGPFAIGRAATADALLNLLLALALFDAWRHLESGRRAPLLRSYVWIGLGVLTKG HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC PIALIVPGAVTFLYCASRLEWQRWLKSVFDPLGWAILAVLTVPWYAAALAIHGQAFIDGF CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ILKHNVERFTGTLEGHAGSLFYYVFAVPLLMLPWTGPLLASLRKIRSDTGTGVRRFLWIW HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHH ALFVIGFFSVSGTKLPHYVLYGSTPLFVLIACHRDLLRGRWAHLAAPTLLLAALAALPLV HHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH FQALSQSEAGNAYYRAQLARSLELAGPAYYGVTLLALAAWLVVALRPAIPLWRSLSVAAV HHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LQVLVLTTTVVPWAGAVLQGPVKAAAAEARRLGGPVVAWRLDTPSFSVYREAVTPSREPL HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCCC PGEIALTRLDRVPASGYELLFRQGGVVLVRRQQQVETPSAPAETSALPAVDAPAPEDRNP CCHHHHHHHHCCCCCHHHHHHHCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA