Click here to switch to the map view.

The map label for this gene is ydhO [H]

Identifier: 119898432

GI number: 119898432

Start: 2344066

End: 2344623

Strand: Direct

Name: ydhO [H]

Synonym: azo2141

Alternate gene names: 119898432

Gene position: 2344066-2344623 (Clockwise)

Preceding gene: 119898431

Following gene: 119898433

Centisome position: 53.57

GC content: 69.35

Gene sequence:

>558_bases
ATGGCACAGACACCACCCTATCCGCGACGCCGGCCGGGGGCCGGCCCCGGCGTCGCGTTCCTGCTCGCGGCGCTCGTTGC
GGCCTGCAGCTCTGTTCCGCCGCCCACTGAATCCCGACTCCCTCCGGGTCCCGCCGCGCGCCCCGCGCAACCGCTGTTCG
CGCTCGACGATCCCGATCATCCCCAAGAGATCGTGATGTTCGCCCTCGGTCTGCTCGACACCGGCTACCGCTTCGGCGGC
CGCAATCCGGAAGCGGGACTCGATTGCAGCGGCATGGTGAGCTACGTCGTGGAGCAGGTAAGCGGTCAGCGGCTGCCGCA
CAACGCCGCGCAAATTGCCGAGCGCACCCGCCCCATCAGCCAGGCGGAGCTGTCGCCGGGCGACCTGGTTTTCTTCAATA
CCGCCAGGCGGCCGCATTCCCACATGGGCATCTACATCGGCGACGGGCGCTTCATCCACGCGCCATCGAGCCGCGGCGCC
GTGCGCATCGAGAAGCTCTCGAACGCCTACTTCGCACCGCGCTTCGACGGCGCGCGGACGCTGATCGCACGCGACTGA

Upstream 100 bases:

>100_bases
GCCTCCCCCCCGCCAGCGACTGCGTGCGCCCCGATAAAGCCTGACCGGCCAGCACCGGCCGCGGCTGGACGCCTGCGCCG
CATTCCCCTATCGTCCCGGC

Downstream 100 bases:

>100_bases
AACCGCATGCCCCCGCCGGCGGGCGTTGGGGTATGTTCGGACTTGCTTCCCCGGCAGCGGCTATCTACCTTTGATGGGCC
GATGGTGGTTTTCCGGAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MAQTPPYPRRRPGAGPGVAFLLAALVAACSSVPPPTESRLPPGPAARPAQPLFALDDPDHPQEIVMFALGLLDTGYRFGG
RNPEAGLDCSGMVSYVVEQVSGQRLPHNAAQIAERTRPISQAELSPGDLVFFNTARRPHSHMGIYIGDGRFIHAPSSRGA
VRIEKLSNAYFAPRFDGARTLIARD

Sequences:

>Translated_185_residues
MAQTPPYPRRRPGAGPGVAFLLAALVAACSSVPPPTESRLPPGPAARPAQPLFALDDPDHPQEIVMFALGLLDTGYRFGG
RNPEAGLDCSGMVSYVVEQVSGQRLPHNAAQIAERTRPISQAELSPGDLVFFNTARRPHSHMGIYIGDGRFIHAPSSRGA
VRIEKLSNAYFAPRFDGARTLIARD
>Mature_184_residues
AQTPPYPRRRPGAGPGVAFLLAALVAACSSVPPPTESRLPPGPAARPAQPLFALDDPDHPQEIVMFALGLLDTGYRFGGR
NPEAGLDCSGMVSYVVEQVSGQRLPHNAAQIAERTRPISQAELSPGDLVFFNTARRPHSHMGIYIGDGRFIHAPSSRGAV
RIEKLSNAYFAPRFDGARTLIARD

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=110, Percent_Identity=38.1818181818182, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1786421, Length=134, Percent_Identity=32.8358208955224, Blast_Score=85, Evalue=2e-18,
Organism=Escherichia coli, GI1788501, Length=192, Percent_Identity=28.6458333333333, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788001, Length=107, Percent_Identity=39.2523364485981, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 19866; Mature: 19735

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTPPYPRRRPGAGPGVAFLLAALVAACSSVPPPTESRLPPGPAARPAQPLFALDDPDH
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
PQEIVMFALGLLDTGYRFGGRNPEAGLDCSGMVSYVVEQVSGQRLPHNAAQIAERTRPIS
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
QAELSPGDLVFFNTARRPHSHMGIYIGDGRFIHAPSSRGAVRIEKLSNAYFAPRFDGART
CCCCCCCCEEEEECCCCCCCCCCEEECCCEEEECCCCCCCEEEEECCCCCCCCCCCCCEE
LIARD
EEECC
>Mature Secondary Structure 
AQTPPYPRRRPGAGPGVAFLLAALVAACSSVPPPTESRLPPGPAARPAQPLFALDDPDH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
PQEIVMFALGLLDTGYRFGGRNPEAGLDCSGMVSYVVEQVSGQRLPHNAAQIAERTRPIS
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
QAELSPGDLVFFNTARRPHSHMGIYIGDGRFIHAPSSRGAVRIEKLSNAYFAPRFDGART
CCCCCCCCEEEEECCCCCCCCCCEEECCCEEEECCCCCCCEEEEECCCCCCCCCCCCCEE
LIARD
EEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]