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The map label for this gene is ylqF [H]

Identifier: 119898411

GI number: 119898411

Start: 2325732

End: 2326607

Strand: Reverse

Name: ylqF [H]

Synonym: azo2120

Alternate gene names: 119898411

Gene position: 2326607-2325732 (Counterclockwise)

Preceding gene: 119898417

Following gene: 119898407

Centisome position: 53.17

GC content: 65.75

Gene sequence:

>876_bases
ATGAATTCCGCGCGGAAGAAAGCGGCCGAAATGCTCGCCGCGATCGACGTCGTGATCGAAGTGACCGATGCCCGCCTGCC
CGAAGCCAGCAGCAACCCGATGATTGGTGAGTTGCGCCGGTTCCGGAACCGGCCCTGCCTGAAGCTGCTGAACAAGGTGG
ATCTGGCCGATCCGGCGGCGACCAAAGCATGGATGGATTTCTACAATCGCCAGCCGAACGTCAAGGCCGTCGCCATATCG
GCCAAAAAACCGGCGGATGTGGCACGCATTCCGGCGCTGTGCCGCATGCTGGCGCCACACCGCGATGACGGCACGAAGCC
GCTGCGCATGATGATCATGGGCATTCCGAACGTCGGCAAATCCACCATCATGAACGCGCTGCTCAAGCGTAAGGTGGCGG
CGGTGGGTGACGAGCCTGCGGTGACGAAGCAGTTGCAGACGCTGGACCTCGGCCCCGGCATGACCCTGACCGACACGCCG
GGCCTGATGTGGCCGAAGATTGAGCATGACGCGGACGGTTTCATGCTTGCCGCCAGCCACGCCATCGGCCGCAACGCGGT
CATCGACGAAGAGGTGGCGGCCTTCCTGGCGGGCATCCTGCTGGTGCGCTACCCGGCGCTGCTGCAGGCGCGCTACAAGA
TCGATCCCGCGCAAATGGATGGCCCCGGTGTGGTCGAGGCGGTGGGGCTGCGCCGGGGATGCCGCACGAAGGGCGGCGGG
CTGGACCTGGAAAAGGCGGCACAGGTACTGCTGACCGACTACCGGAGCGGCGCACTCGGCCGGATCAGTCTTGAAACGCC
GGATACCCGCGCCCGGATGCTGGCCGATGCCGCGGCGGCAGCCGCAGAGGCGCCGGCGGACGACGATCAGGATTAA

Upstream 100 bases:

>100_bases
TTGTCGCGCCAGGTTTCGCTCGGTTTCGCCGCGCGATGGATAATGGCGGACCCCAAGTACGTCTGGACGAACAATGCCCA
TTCAGTGGTTCCCCGGTCAC

Downstream 100 bases:

>100_bases
CGGGCCGGACCGAACCGGATTCCCTGAGCCAGCGGAAGGCTGCCACTACCATTGATGGTGCAGGTGGCGCGCCGCATGTA
GGTCTTCCACACGTCCGACC

Product: GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MNSARKKAAEMLAAIDVVIEVTDARLPEASSNPMIGELRRFRNRPCLKLLNKVDLADPAATKAWMDFYNRQPNVKAVAIS
AKKPADVARIPALCRMLAPHRDDGTKPLRMMIMGIPNVGKSTIMNALLKRKVAAVGDEPAVTKQLQTLDLGPGMTLTDTP
GLMWPKIEHDADGFMLAASHAIGRNAVIDEEVAAFLAGILLVRYPALLQARYKIDPAQMDGPGVVEAVGLRRGCRTKGGG
LDLEKAAQVLLTDYRSGALGRISLETPDTRARMLADAAAAAAEAPADDDQD

Sequences:

>Translated_291_residues
MNSARKKAAEMLAAIDVVIEVTDARLPEASSNPMIGELRRFRNRPCLKLLNKVDLADPAATKAWMDFYNRQPNVKAVAIS
AKKPADVARIPALCRMLAPHRDDGTKPLRMMIMGIPNVGKSTIMNALLKRKVAAVGDEPAVTKQLQTLDLGPGMTLTDTP
GLMWPKIEHDADGFMLAASHAIGRNAVIDEEVAAFLAGILLVRYPALLQARYKIDPAQMDGPGVVEAVGLRRGCRTKGGG
LDLEKAAQVLLTDYRSGALGRISLETPDTRARMLADAAAAAAEAPADDDQD
>Mature_291_residues
MNSARKKAAEMLAAIDVVIEVTDARLPEASSNPMIGELRRFRNRPCLKLLNKVDLADPAATKAWMDFYNRQPNVKAVAIS
AKKPADVARIPALCRMLAPHRDDGTKPLRMMIMGIPNVGKSTIMNALLKRKVAAVGDEPAVTKQLQTLDLGPGMTLTDTP
GLMWPKIEHDADGFMLAASHAIGRNAVIDEEVAAFLAGILLVRYPALLQARYKIDPAQMDGPGVVEAVGLRRGCRTKGGG
LDLEKAAQVLLTDYRSGALGRISLETPDTRARMLADAAAAAAEAPADDDQD

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=288, Percent_Identity=28.125, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI7019419, Length=253, Percent_Identity=27.6679841897233, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI45593130, Length=273, Percent_Identity=24.5421245421245, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI45643129, Length=272, Percent_Identity=24.6323529411765, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI45643127, Length=272, Percent_Identity=24.6323529411765, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17534827, Length=267, Percent_Identity=26.5917602996255, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI115535155, Length=288, Percent_Identity=23.2638888888889, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25143545, Length=288, Percent_Identity=23.2638888888889, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193211047, Length=221, Percent_Identity=31.2217194570136, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI32563985, Length=249, Percent_Identity=25.3012048192771, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71990926, Length=249, Percent_Identity=25.3012048192771, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32563983, Length=249, Percent_Identity=25.3012048192771, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6320842, Length=281, Percent_Identity=26.3345195729537, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6324381, Length=255, Percent_Identity=25.4901960784314, Blast_Score=74, Evalue=3e-14,
Organism=Drosophila melanogaster, GI19922460, Length=258, Percent_Identity=27.906976744186, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI85815858, Length=303, Percent_Identity=26.7326732673267, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28572990, Length=207, Percent_Identity=29.4685990338164, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 31255; Mature: 31255

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSARKKAAEMLAAIDVVIEVTDARLPEASSNPMIGELRRFRNRPCLKLLNKVDLADPAA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHH
TKAWMDFYNRQPNVKAVAISAKKPADVARIPALCRMLAPHRDDGTKPLRMMIMGIPNVGK
HHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHEECCCCCCH
STIMNALLKRKVAAVGDEPAVTKQLQTLDLGPGMTLTDTPGLMWPKIEHDADGFMLAASH
HHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCEEECCCCCCCCCCCCCCCCEEEEEHH
AIGRNAVIDEEVAAFLAGILLVRYPALLQARYKIDPAQMDGPGVVEAVGLRRGCRTKGGG
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCC
LDLEKAAQVLLTDYRSGALGRISLETPDTRARMLADAAAAAAEAPADDDQD
CCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNSARKKAAEMLAAIDVVIEVTDARLPEASSNPMIGELRRFRNRPCLKLLNKVDLADPAA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHH
TKAWMDFYNRQPNVKAVAISAKKPADVARIPALCRMLAPHRDDGTKPLRMMIMGIPNVGK
HHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHEECCCCCCH
STIMNALLKRKVAAVGDEPAVTKQLQTLDLGPGMTLTDTPGLMWPKIEHDADGFMLAASH
HHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCEEECCCCCCCCCCCCCCCCEEEEEHH
AIGRNAVIDEEVAAFLAGILLVRYPALLQARYKIDPAQMDGPGVVEAVGLRRGCRTKGGG
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCC
LDLEKAAQVLLTDYRSGALGRISLETPDTRARMLADAAAAAAEAPADDDQD
CCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]