Click here to switch to the map view.

The map label for this gene is trpH [H]

Identifier: 119898406

GI number: 119898406

Start: 2321712

End: 2322563

Strand: Reverse

Name: trpH [H]

Synonym: azo2115

Alternate gene names: 119898406

Gene position: 2322563-2321712 (Counterclockwise)

Preceding gene: 119898407

Following gene: 119898405

Centisome position: 53.07

GC content: 68.66

Gene sequence:

>852_bases
ATGGATATCCAGGGCCTGAACGTCGATCTGCACTGCCACTCCACCGTGTCGGATGGCTGGTTGTCGCCCGAGGAAGTGGT
GGGCCGCGCTCATCGCAACGGCGCCGACCTGCTCGCGCTGACGGATCACGACGAATTGGGCGGACTCGCTGCGGCGGGCG
CAACGGCCGCAGCGCTCGGTCTCGGCTTCGTGCCGGGGGTCGAGATATCCGTCTCCTTCGCCGGTGAAACCATCCACATC
GTCGGCCTGGGCATCGACCCGGCCAACGCCGCGCTGCGCGGCGGGCTGCAGCAAGTGCGCAGCGGCCGCGACGCGCGCGC
CCGCGTGATGGCCGAAGAGCTGGCGCGCGTCGGCATCCGCGGCGCGCTGGAAGGCGCACGCCGCTTTGCCCGCAACCCGA
ACCTCGTCGGTCGTGCGCACTTTGCCCGTCACATGGTGGCCATCGGCTTGATGCCGGACGTGAAGACCGTGTTCGACCAC
TACCTCGTGCGCGGCAAGCCCGGTTTCGTGGAGCACGAATGGGCCGTCCTCGAGGACGCGGTCGGCTGGATTCGTGCGGC
GGGTGGCGTCGCGGTCGTCGCGCATCCTGCCCGCTACCGGCTGTCATCGGCCAACATGCAGCGCTTGTTCGAGCGTTTCG
TCGCGGCGGGCGGCGAGGCCGTGGAAGTGGTGTCGGGCGCGCACAACGACGATGAAACCCGTCGATTTGCCCACACGGCA
CGCGTGCATGGGTTGTTGGCCTCCCGTGCTTCCGATTTCCATGGTGACACCGAAAGCCCGGTGGACGTCGGCCGCTGCCC
ACCACTGCCGCCCGACCTCGTACCGGTCTGGTCCCGGCTGATTCCATCCTGA

Upstream 100 bases:

>100_bases
GTCCGGATCGGCGATGCCGGCCACAACCTTCATCACGACCAGCCGGGACAGGTGGCTGCCGCGATCGAGGCCTTCCTTGT
TCAGTCGGAGTAGAACCGTC

Downstream 100 bases:

>100_bases
CCCCATCATGGCCCAGTTCTTTTCCCTGCACCCCGACCAACCACAACCGCGCCTCATCCGTCAGGCCGCGGAGATCATCC
GCGGTGGCGGCCTTGTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MDIQGLNVDLHCHSTVSDGWLSPEEVVGRAHRNGADLLALTDHDELGGLAAAGATAAALGLGFVPGVEISVSFAGETIHI
VGLGIDPANAALRGGLQQVRSGRDARARVMAEELARVGIRGALEGARRFARNPNLVGRAHFARHMVAIGLMPDVKTVFDH
YLVRGKPGFVEHEWAVLEDAVGWIRAAGGVAVVAHPARYRLSSANMQRLFERFVAAGGEAVEVVSGAHNDDETRRFAHTA
RVHGLLASRASDFHGDTESPVDVGRCPPLPPDLVPVWSRLIPS

Sequences:

>Translated_283_residues
MDIQGLNVDLHCHSTVSDGWLSPEEVVGRAHRNGADLLALTDHDELGGLAAAGATAAALGLGFVPGVEISVSFAGETIHI
VGLGIDPANAALRGGLQQVRSGRDARARVMAEELARVGIRGALEGARRFARNPNLVGRAHFARHMVAIGLMPDVKTVFDH
YLVRGKPGFVEHEWAVLEDAVGWIRAAGGVAVVAHPARYRLSSANMQRLFERFVAAGGEAVEVVSGAHNDDETRRFAHTA
RVHGLLASRASDFHGDTESPVDVGRCPPLPPDLVPVWSRLIPS
>Mature_283_residues
MDIQGLNVDLHCHSTVSDGWLSPEEVVGRAHRNGADLLALTDHDELGGLAAAGATAAALGLGFVPGVEISVSFAGETIHI
VGLGIDPANAALRGGLQQVRSGRDARARVMAEELARVGIRGALEGARRFARNPNLVGRAHFARHMVAIGLMPDVKTVFDH
YLVRGKPGFVEHEWAVLEDAVGWIRAAGGVAVVAHPARYRLSSANMQRLFERFVAAGGEAVEVVSGAHNDDETRRFAHTA
RVHGLLASRASDFHGDTESPVDVGRCPPLPPDLVPVWSRLIPS

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=272, Percent_Identity=41.1764705882353, Blast_Score=186, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 30084; Mature: 30084

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQGLNVDLHCHSTVSDGWLSPEEVVGRAHRNGADLLALTDHDELGGLAAAGATAAALG
CCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHCCHHHHHHHHHHHH
LGFVPGVEISVSFAGETIHIVGLGIDPANAALRGGLQQVRSGRDARARVMAEELARVGIR
HCCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GALEGARRFARNPNLVGRAHFARHMVAIGLMPDVKTVFDHYLVRGKPGFVEHEWAVLEDA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
VGWIRAAGGVAVVAHPARYRLSSANMQRLFERFVAAGGEAVEVVSGAHNDDETRRFAHTA
HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCHHHHHHHHHH
RVHGLLASRASDFHGDTESPVDVGRCPPLPPDLVPVWSRLIPS
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MDIQGLNVDLHCHSTVSDGWLSPEEVVGRAHRNGADLLALTDHDELGGLAAAGATAAALG
CCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHCCHHHHHHHHHHHH
LGFVPGVEISVSFAGETIHIVGLGIDPANAALRGGLQQVRSGRDARARVMAEELARVGIR
HCCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GALEGARRFARNPNLVGRAHFARHMVAIGLMPDVKTVFDHYLVRGKPGFVEHEWAVLEDA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
VGWIRAAGGVAVVAHPARYRLSSANMQRLFERFVAAGGEAVEVVSGAHNDDETRRFAHTA
HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCHHHHHHHHHH
RVHGLLASRASDFHGDTESPVDVGRCPPLPPDLVPVWSRLIPS
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]