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The map label for this gene is rimP

Identifier: 119898400

GI number: 119898400

Start: 2317260

End: 2317694

Strand: Reverse

Name: rimP

Synonym: azo2109

Alternate gene names: 119898400

Gene position: 2317694-2317260 (Counterclockwise)

Preceding gene: 119898401

Following gene: 119898399

Centisome position: 52.96

GC content: 57.24

Gene sequence:

>435_bases
ATGCAGGCAGGCGTCGAAAATCTTGTCGAGCAGGTAGTCAGTGGGCTGGGATACGAGTTGGTGGATTTCGAACTCTCCCC
CAAGGGCCGGCTGCTGCGCGTGTTCATCGACATCGAGCGCGGTGTCACGGTTGATGACTGCGCTACCGTCAGCAATCAGC
TGACGCGCGTTTTCGAAGTCGAGAATGTCGATTACGACCGCCTCGAAGTGTCCTCGCCCGGACTCGACCGCCCCCTCAAG
AAGCTGGCCGATTTCGAACGCTTCGCGGGCCAGGAAATCCAATTGCGCCTTTCGCTGCCCATTGGCAATCAACGCAATTT
CGTGGGCGTGCTGCAGGGCGTGCGTGAATCCAGCGTCGTCCTGCTTACCGAAAAAGGGGAGCTGCTTGCTCCGTTTGAAG
AAATCGAAAAGGCCCGCCTTGTTCCAAAATTCTAA

Upstream 100 bases:

>100_bases
CAACGCGGGGCGAAAGGGCGGGGCGGCTGTGTCACTCCGGTTGTGGTCAACAGGAATGGGCGTTTCGCCCATTTTTTATT
TGTGGGCGTGGATAGTGGGA

Downstream 100 bases:

>100_bases
GACTCTGGATGTGGAGGTTTTCCTGAAATGAGCCGCGAAATTCTGCTGCTTGTGGATGCACTGGCGCGTGAAAAGAACGT
CGCCAAGGATATCGTCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MQAGVENLVEQVVSGLGYELVDFELSPKGRLLRVFIDIERGVTVDDCATVSNQLTRVFEVENVDYDRLEVSSPGLDRPLK
KLADFERFAGQEIQLRLSLPIGNQRNFVGVLQGVRESSVVLLTEKGELLAPFEEIEKARLVPKF

Sequences:

>Translated_144_residues
MQAGVENLVEQVVSGLGYELVDFELSPKGRLLRVFIDIERGVTVDDCATVSNQLTRVFEVENVDYDRLEVSSPGLDRPLK
KLADFERFAGQEIQLRLSLPIGNQRNFVGVLQGVRESSVVLLTEKGELLAPFEEIEKARLVPKF
>Mature_144_residues
MQAGVENLVEQVVSGLGYELVDFELSPKGRLLRVFIDIERGVTVDDCATVSNQLTRVFEVENVDYDRLEVSSPGLDRPLK
KLADFERFAGQEIQLRLSLPIGNQRNFVGVLQGVRESSVVLLTEKGELLAPFEEIEKARLVPKF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=142, Percent_Identity=41.5492957746479, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_AZOSB (A1K7C1)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_933613.1
- ProteinModelPortal:   A1K7C1
- SMR:   A1K7C1
- STRING:   A1K7C1
- GeneID:   4609433
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo2109
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- PhylomeDB:   A1K7C1
- ProtClustDB:   PRK00092
- BioCyc:   ASP62928:AZO2109-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 16148; Mature: 16148

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAGVENLVEQVVSGLGYELVDFELSPKGRLLRVFIDIERGVTVDDCATVSNQLTRVFEV
CCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHEE
ENVDYDRLEVSSPGLDRPLKKLADFERFAGQEIQLRLSLPIGNQRNFVGVLQGVRESSVV
CCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHCCCCCCEE
LLTEKGELLAPFEEIEKARLVPKF
EEECCCCEECCHHHHHHHHCCCCC
>Mature Secondary Structure
MQAGVENLVEQVVSGLGYELVDFELSPKGRLLRVFIDIERGVTVDDCATVSNQLTRVFEV
CCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHEE
ENVDYDRLEVSSPGLDRPLKKLADFERFAGQEIQLRLSLPIGNQRNFVGVLQGVRESSVV
CCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHCCCCCCEE
LLTEKGELLAPFEEIEKARLVPKF
EEECCCCEECCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA