| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is ppdD [C]
Identifier: 119898379
GI number: 119898379
Start: 2294427
End: 2294819
Strand: Reverse
Name: ppdD [C]
Synonym: azo2088
Alternate gene names: 119898379
Gene position: 2294819-2294427 (Counterclockwise)
Preceding gene: 119898380
Following gene: 119898378
Centisome position: 52.44
GC content: 68.45
Gene sequence:
>393_bases ATGACGGCATCCCGGGTGCGGCGCGGCTTCACGCTGATCGAGCTGCTGGTGGTGATGGCGATCGTCGCGCTGCTGCTGGC GATCGCTGCGCCGCGCTACTTCGATCACGTGGAGCGCGCGCGAGAGACGAGCCTGCGCCAGTCGCTCGCGGTGATGCGTG ATGCGCTCGACAAGTACAAGGCCGACACCGGGCGCTTTCCGCACGCATTGGCCGATCTCGTCGAGCGACGCTACCTGCGC GCGATTCCGCGCGATCCGATCACCGACAGCGAAGCGAGCTGGATCGAAGTTGCGGAGGCGCCGGGCGCAGATGGCGAGGG TGGCGGGGTCCGCGATGTCCGCAGCGGCGCTGAAGGCGGCGGCCTGGACGGAACACCGTATGCAGACTGGTAG
Upstream 100 bases:
>100_bases CGCCTGAAGCCCCCGCCGCGGGTGCGGATGTTTTCGACGTCTATTCGCTCGCCGACGGCGTGGGGCTGGACGGCGTGCCC TATCGCGAATGGTGAGCGCG
Downstream 100 bases:
>100_bases CCTCCCTCCGCCGCGCTCCCGTCAACGCGGCTACAGCTATCTGCTGATCCTGTTCACCGTGGCCGCGCTCGGCTTCGGCA TCGCGCAGGCTGGCGTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: General Secretion Pathway Protein G; Methylation; Pilus Assembly Protein; General Secretion Pathway GSPG-Like Transmembrane Protein; General Secretion Pathway GSPG-Like; GSPG-Related Protein; N-Terminal Methylation Site; Pilin Domain-Containing Protein; Type II Secretion System Protein; Fimbrial Protein Pilin; Secretion Protein; Prokaryotic N-Terminal Methylation Site
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTASRVRRGFTLIELLVVMAIVALLLAIAAPRYFDHVERARETSLRQSLAVMRDALDKYKADTGRFPHALADLVERRYLR AIPRDPITDSEASWIEVAEAPGADGEGGGVRDVRSGAEGGGLDGTPYADW
Sequences:
>Translated_130_residues MTASRVRRGFTLIELLVVMAIVALLLAIAAPRYFDHVERARETSLRQSLAVMRDALDKYKADTGRFPHALADLVERRYLR AIPRDPITDSEASWIEVAEAPGADGEGGGVRDVRSGAEGGGLDGTPYADW >Mature_129_residues TASRVRRGFTLIELLVVMAIVALLLAIAAPRYFDHVERARETSLRQSLAVMRDALDKYKADTGRFPHALADLVERRYLRA IPRDPITDSEASWIEVAEAPGADGEGGGVRDVRSGAEGGGLDGTPYADW
Specific function: Not Yet Known. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14196; Mature: 14065
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASRVRRGFTLIELLVVMAIVALLLAIAAPRYFDHVERARETSLRQSLAVMRDALDKYK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADTGRFPHALADLVERRYLRAIPRDPITDSEASWIEVAEAPGADGEGGGVRDVRSGAEGG CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCC GLDGTPYADW CCCCCCCCCC >Mature Secondary Structure TASRVRRGFTLIELLVVMAIVALLLAIAAPRYFDHVERARETSLRQSLAVMRDALDKYK CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADTGRFPHALADLVERRYLRAIPRDPITDSEASWIEVAEAPGADGEGGGVRDVRSGAEGG CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCC GLDGTPYADW CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA