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The map label for this gene is badR [H]

Identifier: 119898288

GI number: 119898288

Start: 2198864

End: 2199388

Strand: Direct

Name: badR [H]

Synonym: azo1997

Alternate gene names: 119898288

Gene position: 2198864-2199388 (Clockwise)

Preceding gene: 119898287

Following gene: 119898290

Centisome position: 50.25

GC content: 64.76

Gene sequence:

>525_bases
ATGACGCTAGAACAGACCGAAACGCCGTCCAACGCCGACCCGGACATCATCGACCATGAAACCCGCGCCACCGACGCGGA
CCACGAGGCCCTGCGGGTATGGCTGCGGCTGCTGACCTGCACCAACATCGTCGAATCGCGCCTGCGCAACCAGTTGCGCA
CCGGTTTCGATTCGACGCTGCCACGCTTCGACCTGATGGCACAGCTCGACCGCAACCCGGAAGGCCTCAAGATGCGCGAG
CTGTCGCGCCGGCTGATGGTCACCGGCGGCAACGTGACCGGGCTGACCGACAAGCTGGTGGAAGAAGGGCTGGTGGAGCG
CCGCGACGATCCGCGCGATCGCCGGGCCTACACGGTGCATCTCACCCCGGAAGGCAAGCGCCTGTTCCGGCAGATGGCGA
GTTCGCACGAAAACTGGGTGATCGAACTGTTTGCGGGGCTCGACCACGACGAGAAGATTCAGTTGCTCGATCTGCTGAAC
CGCCTGAAGCGCCACCTCACCGCACTGGACAGCGGCGCCAGCTGA

Upstream 100 bases:

>100_bases
GATCAAATCAATTTAAGCGTGAATGATTTAACCGATTCACGCGTTAGAATGACCGGCAAGGGCGCTCTCCGCCCATCCAA
TGCACGCTGCAGGTATCGCC

Downstream 100 bases:

>100_bases
AGTACTGCGCGGCTCAACCTGCCCGGCACAGGGCTTCCAGCACGCGCCGCACCCGCAGCATCGCTTCCTGCAACACCAGT
TCGATGCTGTCGAAGTGGAT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTLEQTETPSNADPDIIDHETRATDADHEALRVWLRLLTCTNIVESRLRNQLRTGFDSTLPRFDLMAQLDRNPEGLKMRE
LSRRLMVTGGNVTGLTDKLVEEGLVERRDDPRDRRAYTVHLTPEGKRLFRQMASSHENWVIELFAGLDHDEKIQLLDLLN
RLKRHLTALDSGAS

Sequences:

>Translated_174_residues
MTLEQTETPSNADPDIIDHETRATDADHEALRVWLRLLTCTNIVESRLRNQLRTGFDSTLPRFDLMAQLDRNPEGLKMRE
LSRRLMVTGGNVTGLTDKLVEEGLVERRDDPRDRRAYTVHLTPEGKRLFRQMASSHENWVIELFAGLDHDEKIQLLDLLN
RLKRHLTALDSGAS
>Mature_173_residues
TLEQTETPSNADPDIIDHETRATDADHEALRVWLRLLTCTNIVESRLRNQLRTGFDSTLPRFDLMAQLDRNPEGLKMREL
SRRLMVTGGNVTGLTDKLVEEGLVERRDDPRDRRAYTVHLTPEGKRLFRQMASSHENWVIELFAGLDHDEKIQLLDLLNR
LKRHLTALDSGAS

Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 20012; Mature: 19881

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLEQTETPSNADPDIIDHETRATDADHEALRVWLRLLTCTNIVESRLRNQLRTGFDSTL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCC
PRFDLMAQLDRNPEGLKMRELSRRLMVTGGNVTGLTDKLVEEGLVERRDDPRDRRAYTVH
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEE
LTPEGKRLFRQMASSHENWVIELFAGLDHDEKIQLLDLLNRLKRHLTALDSGAS
ECCCHHHHHHHHHHCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TLEQTETPSNADPDIIDHETRATDADHEALRVWLRLLTCTNIVESRLRNQLRTGFDSTL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCC
PRFDLMAQLDRNPEGLKMRELSRRLMVTGGNVTGLTDKLVEEGLVERRDDPRDRRAYTVH
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEE
LTPEGKRLFRQMASSHENWVIELFAGLDHDEKIQLLDLLNRLKRHLTALDSGAS
ECCCHHHHHHHHHHCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]