| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yedI [H]
Identifier: 119898231
GI number: 119898231
Start: 2129896
End: 2130807
Strand: Reverse
Name: yedI [H]
Synonym: azo1940
Alternate gene names: 119898231
Gene position: 2130807-2129896 (Counterclockwise)
Preceding gene: 119898232
Following gene: 119898226
Centisome position: 48.69
GC content: 68.75
Gene sequence:
>912_bases GTGCTCGACGACGTGTCGGTGATGAGCAAGGTGGCGGCGAAGAAAACGGCCGGCGTGCTCGGCGATGACCTCGCGCTCAA CGCCCAGCAGGTCACCGGCGTCAATGCCGACCGCGAGTTGCCCGTGGTCTGGGCGGTCGCGCTCGGTTCGCTGAAGAACA AGGCCATCCTGGTGCCGGCGGCGCTGGCGATCAGCGCCTTCGTGCCTTGGCTGGTAACGCCGCTGCTGATGGTGGGCGGC GCCTTCCTGTGCTTCGAGGGCTTCGAGAAGCTCGCCCACAGATTCCTCCACGCCCGCGCGGAGGATGCGGCGCATCACGC CGAACTGGCGCAGGCAGTGGCAGACCCGGCGGTCGATATGAAGGCGTTCGAGAAGGACAAGATCCAGGGCGCGGTGCGCA CGGACTTCATCCTCTCGGCCGAGATCATCGCGATCACCCTCGGCACCGTGGCCGACGCACCGCTCGGCACCCAGGTAGCG GTGCTGACGACGATTGCGCTGCTCATGACCGTCGGCGTGTATGGCTTCGTCGCCGGCATTGTCAAACTCGACGACGGCGG GCTGTACCTCAGCCGCAAGGCGGGCGAAGGCGGGCTTCGCCGCCTCCAGCGCGCCACCGGCCGCGGCATCCTCGCCGCCG CGCCGTGGCTGATGAAAAGCCTGTCGGTACTCGGCACCGCGGCGATGTTCCTGGTCGGCGGCGGCATCCTTACCCACGGC ATTCCGGGCGCACATGACGTGATACATGGAGCGGCGCACGCGGTAGGCGGAGTGCCCGCGATCGGGCCGGTGCTGGAGGC AGTGGCGCCCACGGTGCTGGATGGCGTGGCGGGAGTGATTGCCGGAGCGCTGGTGCTGGCGGGGGTTACGGCGGTGGGTA AGGCGCTGCGGTTGGTGAGGGCGAGGGCTTAG
Upstream 100 bases:
>100_bases TGACCCAGCCGATTCCCACGCCCGCCCGCCGTCCGAGCATGGCTGGAGAACGCTGATGGCCGGCACCAGCCTGCTCGCGC TGATCGACGACATCGCGAGC
Downstream 100 bases:
>100_bases AGGGTCTTGTTCCTCCCCCTTCAGGGGGGCGTACCGGGGTTTGGCGGCACTGCCTGCCGCCTGCGGAGCGGCAAGTCGGA GCCGAGACTACCGGCCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MLDDVSVMSKVAAKKTAGVLGDDLALNAQQVTGVNADRELPVVWAVALGSLKNKAILVPAALAISAFVPWLVTPLLMVGG AFLCFEGFEKLAHRFLHARAEDAAHHAELAQAVADPAVDMKAFEKDKIQGAVRTDFILSAEIIAITLGTVADAPLGTQVA VLTTIALLMTVGVYGFVAGIVKLDDGGLYLSRKAGEGGLRRLQRATGRGILAAAPWLMKSLSVLGTAAMFLVGGGILTHG IPGAHDVIHGAAHAVGGVPAIGPVLEAVAPTVLDGVAGVIAGALVLAGVTAVGKALRLVRARA
Sequences:
>Translated_303_residues MLDDVSVMSKVAAKKTAGVLGDDLALNAQQVTGVNADRELPVVWAVALGSLKNKAILVPAALAISAFVPWLVTPLLMVGG AFLCFEGFEKLAHRFLHARAEDAAHHAELAQAVADPAVDMKAFEKDKIQGAVRTDFILSAEIIAITLGTVADAPLGTQVA VLTTIALLMTVGVYGFVAGIVKLDDGGLYLSRKAGEGGLRRLQRATGRGILAAAPWLMKSLSVLGTAAMFLVGGGILTHG IPGAHDVIHGAAHAVGGVPAIGPVLEAVAPTVLDGVAGVIAGALVLAGVTAVGKALRLVRARA >Mature_303_residues MLDDVSVMSKVAAKKTAGVLGDDLALNAQQVTGVNADRELPVVWAVALGSLKNKAILVPAALAISAFVPWLVTPLLMVGG AFLCFEGFEKLAHRFLHARAEDAAHHAELAQAVADPAVDMKAFEKDKIQGAVRTDFILSAEIIAITLGTVADAPLGTQVA VLTTIALLMTVGVYGFVAGIVKLDDGGLYLSRKAGEGGLRRLQRATGRGILAAAPWLMKSLSVLGTAAMFLVGGGILTHG IPGAHDVIHGAAHAVGGVPAIGPVLEAVAPTVLDGVAGVIAGALVLAGVTAVGKALRLVRARA
Specific function: Unknown
COG id: COG2354
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788268, Length=296, Percent_Identity=59.7972972972973, Blast_Score=313, Evalue=1e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008526 [H]
Pfam domain/function: PF05661 DUF808 [H]
EC number: NA
Molecular weight: Translated: 30853; Mature: 30853
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDDVSVMSKVAAKKTAGVLGDDLALNAQQVTGVNADRELPVVWAVALGSLKNKAILVPA CCCHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEHHH ALAISAFVPWLVTPLLMVGGAFLCFEGFEKLAHRFLHARAEDAAHHAELAQAVADPAVDM HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH KAFEKDKIQGAVRTDFILSAEIIAITLGTVADAPLGTQVAVLTTIALLMTVGVYGFVAGI HHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VKLDDGGLYLSRKAGEGGLRRLQRATGRGILAAAPWLMKSLSVLGTAAMFLVGGGILTHG HEECCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC IPGAHDVIHGAAHAVGGVPAIGPVLEAVAPTVLDGVAGVIAGALVLAGVTAVGKALRLVR CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARA HCC >Mature Secondary Structure MLDDVSVMSKVAAKKTAGVLGDDLALNAQQVTGVNADRELPVVWAVALGSLKNKAILVPA CCCHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEHHH ALAISAFVPWLVTPLLMVGGAFLCFEGFEKLAHRFLHARAEDAAHHAELAQAVADPAVDM HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH KAFEKDKIQGAVRTDFILSAEIIAITLGTVADAPLGTQVAVLTTIALLMTVGVYGFVAGI HHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VKLDDGGLYLSRKAGEGGLRRLQRATGRGILAAAPWLMKSLSVLGTAAMFLVGGGILTHG HEECCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC IPGAHDVIHGAAHAVGGVPAIGPVLEAVAPTVLDGVAGVIAGALVLAGVTAVGKALRLVR CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARA HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 2527357; 7567469 [H]