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The map label for this gene is crtB2 [H]

Identifier: 119898175

GI number: 119898175

Start: 2068913

End: 2069746

Strand: Direct

Name: crtB2 [H]

Synonym: azo1884

Alternate gene names: 119898175

Gene position: 2068913-2069746 (Clockwise)

Preceding gene: 119898174

Following gene: 119898176

Centisome position: 47.28

GC content: 66.31

Gene sequence:

>834_bases
TTGAATCCGCACGACTATTGCCAGGACAAGGCCGCCAAGAGCGGCTCCAGCTTCTACTACAGCTTCATGTTCCTGCCGCC
GGAGCGGCGCCAGGCGATCACCGCGCTGTACGCCTTCTGCCGTGAAGTGGACGACGTCGTGGACGAATGCCACGACGTCT
CGCTTGCGCACATCAAGCTCGATTGGTGGCGGCAGGAGGTCGGCCGCGTGTTCGGCGGCACGCCCACTCATCCGGTAGGG
CTGGCGTTGCAGGACGTGACCGCCCGCTTCCGGCTGCCGCAGGCGCGCCTGCTGGAGATCATCGACGGGATGGCGATGGA
TCTCAGCCAGTCCCGTTACCTCGATTTCAAGGGGCTGCAGCTCTACTGCTACCGCGTCGCCAGCGTGGTGGGGCTGCTCG
CGGCCGAGATCTTCGGCTACACCGACCCCCGCACGCTCGACTACGCGCACGACCTCGGGCTGGCTTTCCAGCTCACCAAC
ATCATCCGCGACGTGGGCGAGGATGCCCGCCGCGGCCGCATCTATCTGCCCATCGAAGACCTGCAACGTTTCCAGGTGCC
GGCCAACGAGATCCTCGAAGCGCGCCATTCCGACCGCTTCGTGGCCTTGATGGCCTTTCAGGCCGAACGCGCCGAGGGCT
ACTACCACAGCGCATTCGCAAAGCTGCCCGCGGCCGACCGCAAGAGCCAGCGCCCTGGTCTGGTGATGGCCGCGATCTAC
CGCGCGCTGCTCGATGAAATCCGCCGCGACGGCTTCAAGGTGCTCGACCGCCGGACCTCGCTGACGCCGCTGCGCAAGGT
GTGGCTGGCCGGCTGGACCTGGGTCAAGGGCTGA

Upstream 100 bases:

>100_bases
GCGCCGCCTCGGTGGGCGCGCCGGCCCCGTGCTCCGCGCGCCCCTCATCCACCTCCCCCGCCGCTGCCGCCAGCGGTTCC
CTTCTTTTCGGAGTGGCGGC

Downstream 100 bases:

>100_bases
GCCGATGAGCGCGTCCGTCCCCGCGGTCGCCGTCATCGGCGCCGGTTACGCCGGGCTTGCGTGCGCAGTGGAGTTGGCGC
GCCGGGGCGTGCATGTGACC

Product: putative phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MNPHDYCQDKAAKSGSSFYYSFMFLPPERRQAITALYAFCREVDDVVDECHDVSLAHIKLDWWRQEVGRVFGGTPTHPVG
LALQDVTARFRLPQARLLEIIDGMAMDLSQSRYLDFKGLQLYCYRVASVVGLLAAEIFGYTDPRTLDYAHDLGLAFQLTN
IIRDVGEDARRGRIYLPIEDLQRFQVPANEILEARHSDRFVALMAFQAERAEGYYHSAFAKLPAADRKSQRPGLVMAAIY
RALLDEIRRDGFKVLDRRTSLTPLRKVWLAGWTWVKG

Sequences:

>Translated_277_residues
MNPHDYCQDKAAKSGSSFYYSFMFLPPERRQAITALYAFCREVDDVVDECHDVSLAHIKLDWWRQEVGRVFGGTPTHPVG
LALQDVTARFRLPQARLLEIIDGMAMDLSQSRYLDFKGLQLYCYRVASVVGLLAAEIFGYTDPRTLDYAHDLGLAFQLTN
IIRDVGEDARRGRIYLPIEDLQRFQVPANEILEARHSDRFVALMAFQAERAEGYYHSAFAKLPAADRKSQRPGLVMAAIY
RALLDEIRRDGFKVLDRRTSLTPLRKVWLAGWTWVKG
>Mature_277_residues
MNPHDYCQDKAAKSGSSFYYSFMFLPPERRQAITALYAFCREVDDVVDECHDVSLAHIKLDWWRQEVGRVFGGTPTHPVG
LALQDVTARFRLPQARLLEIIDGMAMDLSQSRYLDFKGLQLYCYRVASVVGLLAAEIFGYTDPRTLDYAHDLGLAFQLTN
IIRDVGEDARRGRIYLPIEDLQRFQVPANEILEARHSDRFVALMAFQAERAEGYYHSAFAKLPAADRKSQRPGLVMAAIY
RALLDEIRRDGFKVLDRRTSLTPLRKVWLAGWTWVKG

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

Organism=Homo sapiens, GI124517691, Length=276, Percent_Identity=23.1884057971014, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 31726; Mature: 31726

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPHDYCQDKAAKSGSSFYYSFMFLPPERRQAITALYAFCREVDDVVDECHDVSLAHIKL
CCCHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEH
DWWRQEVGRVFGGTPTHPVGLALQDVTARFRLPQARLLEIIDGMAMDLSQSRYLDFKGLQ
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCCCHH
LYCYRVASVVGLLAAEIFGYTDPRTLDYAHDLGLAFQLTNIIRDVGEDARRGRIYLPIED
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEEHHH
LQRFQVPANEILEARHSDRFVALMAFQAERAEGYYHSAFAKLPAADRKSQRPGLVMAAIY
HHHHCCCHHHHHHHHCCCCEEEEEEHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHH
RALLDEIRRDGFKVLDRRTSLTPLRKVWLAGWTWVKG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEECCC
>Mature Secondary Structure
MNPHDYCQDKAAKSGSSFYYSFMFLPPERRQAITALYAFCREVDDVVDECHDVSLAHIKL
CCCHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEH
DWWRQEVGRVFGGTPTHPVGLALQDVTARFRLPQARLLEIIDGMAMDLSQSRYLDFKGLQ
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCCCHH
LYCYRVASVVGLLAAEIFGYTDPRTLDYAHDLGLAFQLTNIIRDVGEDARRGRIYLPIED
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEEHHH
LQRFQVPANEILEARHSDRFVALMAFQAERAEGYYHSAFAKLPAADRKSQRPGLVMAAIY
HHHHCCCHHHHHHHHCCCCEEEEEEHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHH
RALLDEIRRDGFKVLDRRTSLTPLRKVWLAGWTWVKG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA