| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is lapH [H]
Identifier: 119898145
GI number: 119898145
Start: 2037507
End: 2038310
Strand: Direct
Name: lapH [H]
Synonym: azo1854
Alternate gene names: 119898145
Gene position: 2037507-2038310 (Clockwise)
Preceding gene: 119898144
Following gene: 119898146
Centisome position: 46.56
GC content: 68.53
Gene sequence:
>804_bases ATGAGCCAGAACCTGACCCTGTCGCGCGAGGACATCGTGCGCCTGTGCGAACGCGTGGAAGGTGCGCAGACCCGCGCCTA CGCCATCCCCAAACTCACCGACGAATACCCGGCGATGACCATCGCCGACGGCTACGCGGTGCAGAGCGAGCTGCGCCGCC GCTACCTCGCCCAAGGCCATCGGCTGGTGGGCTGGAAGGCGGGGCTGACCTCGAAGGCGAAGATGAAGCAGATGGGCGTG GATGTGCCGTCCATCGGCTTCCTCACCGACCGCATGGCGCGGCCGGAGAACGCCGCGATTTCCACTGGCGACCTGGTGCA CCCGCGCGTCGAGTGCGAGGTGGCTTTCGTGATGAAGCGCGAACTGCGCGGCCCCGGCTGTACCGCGGCGGACGTGCTGG CGGCTACCGACTACGTGCTGCCGGCGGTAGAGATCATCGATTCGCGCTTTGCCGGCTTCAAGTTCGACCTGCCCAGCGTG ATCGCCGACAACGGTTCGTCGGCGCGTTTCGTCGGCGGCGGGCGGGCGCGCTACGTCGAGGAGCTGGACCTGCGCACGCT CGGCGTGGTGCTGGAAAAGAACGGCGAGATCGTCGCGATGGGCGCCTCGGCGGCGGTGCTCGGCCATCCGGCCGAGGCCA TCGCGATGCTGGTGAACATCCTCGCCGACCTGGGCGAGACGCTGCCGGCGGGCAGCTTCGTGATGAGCGGCGGCATTACC GAGGCGATTGCGGTGCAGCCGGGCGACAGCGTGGTCGCGCGCTTCCAGGAACTGGGCAGCGTGTCGATGCGCTTCGTGGC CTGA
Upstream 100 bases:
>100_bases CGCAGTCGGCGCTGGTGCCGGTGGCCGATGGCGACGAACTGGTGTGCACCGTGGGCGGGCTTGGCAGCTGTCGGGTGAAG TTCGCGGGGAGGAGTGCGGT
Downstream 100 bases:
>100_bases GCGATTTCAAGGGGGAGACATGCCAATCATCGAGATGCACCTGATGGAGGGGCGCACCGTCGAGCAGAAGCGGGCGGTGG CGCAGGCCGTTACCGAGGCG
Product: 4-oxalocrotonate decarboxylase
Products: NA
Alternate protein names: 4-OD [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSQNLTLSREDIVRLCERVEGAQTRAYAIPKLTDEYPAMTIADGYAVQSELRRRYLAQGHRLVGWKAGLTSKAKMKQMGV DVPSIGFLTDRMARPENAAISTGDLVHPRVECEVAFVMKRELRGPGCTAADVLAATDYVLPAVEIIDSRFAGFKFDLPSV IADNGSSARFVGGGRARYVEELDLRTLGVVLEKNGEIVAMGASAAVLGHPAEAIAMLVNILADLGETLPAGSFVMSGGIT EAIAVQPGDSVVARFQELGSVSMRFVA
Sequences:
>Translated_267_residues MSQNLTLSREDIVRLCERVEGAQTRAYAIPKLTDEYPAMTIADGYAVQSELRRRYLAQGHRLVGWKAGLTSKAKMKQMGV DVPSIGFLTDRMARPENAAISTGDLVHPRVECEVAFVMKRELRGPGCTAADVLAATDYVLPAVEIIDSRFAGFKFDLPSV IADNGSSARFVGGGRARYVEELDLRTLGVVLEKNGEIVAMGASAAVLGHPAEAIAMLVNILADLGETLPAGSFVMSGGIT EAIAVQPGDSVVARFQELGSVSMRFVA >Mature_266_residues SQNLTLSREDIVRLCERVEGAQTRAYAIPKLTDEYPAMTIADGYAVQSELRRRYLAQGHRLVGWKAGLTSKAKMKQMGVD VPSIGFLTDRMARPENAAISTGDLVHPRVECEVAFVMKRELRGPGCTAADVLAATDYVLPAVEIIDSRFAGFKFDLPSVI ADNGSSARFVGGGRARYVEELDLRTLGVVLEKNGEIVAMGASAAVLGHPAEAIAMLVNILADLGETLPAGSFVMSGGITE AIAVQPGDSVVARFQELGSVSMRFVA
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=259, Percent_Identity=32.046332046332, Blast_Score=138, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017630 - InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =4.1.1.77 [H]
Molecular weight: Translated: 28545; Mature: 28414
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNLTLSREDIVRLCERVEGAQTRAYAIPKLTDEYPAMTIADGYAVQSELRRRYLAQGH CCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHCCC RLVGWKAGLTSKAKMKQMGVDVPSIGFLTDRMARPENAAISTGDLVHPRVECEVAFVMKR EEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH ELRGPGCTAADVLAATDYVLPAVEIIDSRFAGFKFDLPSVIADNGSSARFVGGGRARYVE HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHCCCCCEEEECCCHHHHHH ELDLRTLGVVLEKNGEIVAMGASAAVLGHPAEAIAMLVNILADLGETLPAGSFVMSGGIT HHHHHHEEEEEECCCCEEEECCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCC EAIAVQPGDSVVARFQELGSVSMRFVA EEEEECCCHHHHHHHHHHCCCEEEECC >Mature Secondary Structure SQNLTLSREDIVRLCERVEGAQTRAYAIPKLTDEYPAMTIADGYAVQSELRRRYLAQGH CCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHCCC RLVGWKAGLTSKAKMKQMGVDVPSIGFLTDRMARPENAAISTGDLVHPRVECEVAFVMKR EEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH ELRGPGCTAADVLAATDYVLPAVEIIDSRFAGFKFDLPSVIADNGSSARFVGGGRARYVE HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHCCCCCEEEECCCHHHHHH ELDLRTLGVVLEKNGEIVAMGASAAVLGHPAEAIAMLVNILADLGETLPAGSFVMSGGIT HHHHHHEEEEEECCCCEEEECCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCC EAIAVQPGDSVVARFQELGSVSMRFVA EEEEECCCHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1732207 [H]