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The map label for this gene is ygaD2 [H]

Identifier: 119898115

GI number: 119898115

Start: 2002246

End: 2002746

Strand: Reverse

Name: ygaD2 [H]

Synonym: azo1824

Alternate gene names: 119898115

Gene position: 2002746-2002246 (Counterclockwise)

Preceding gene: 119898116

Following gene: 119898102

Centisome position: 45.77

GC content: 71.06

Gene sequence:

>501_bases
ATGGACACGCTGGACGAACTCGCCGACTTCATGAAGCGCCACCAGCTGCTGCTGGTCACCGCCGAATCGTGTACCGCGGG
GCTGATTGCCGCCCACCTGGCCGACGTGCCCGGGGCGGGCGAACTGCTCGACTGCGCCTTCGTCACCTATTCCACCGAAG
CCAAGGCGCGCTGCCTCGAGGTCGATTTCGGCACCATCGCCCGCCACGGCCTCAGCAGCGAGGCGGTGGCCGCCGAAATG
GCGCGCGGCGCGCTGCGCCACAGCCGCGCCAACGTCGCCATCGCCAACACCGGCGTGGCGGACAACGCCGGCGACGGCAA
CACGCCGCCGGGAACCCAGTGCTTCGCGTGGGCCTATCGCCGCGCCGACGGCGGCGACCAGGCCGAAGTGTTTACCGAAA
CCCGTCGTTTTCACGGGGACCGCAACGCCGTTCGCGAGGCCGCGGCCGAGTACGCGCTGCTGCGCATCCCGCATTACTGC
GCCCCGCGCGGCGGCGCCTGA

Upstream 100 bases:

>100_bases
TCGGCCTTGCGCTGCCGCGCCTGCTCGGCCGCCGCCGCGCCGGCGGCACGCCGATTGCAGCCCGCCCTGCTGAATCCACA
CAGCCCACGGGGGAGGACGC

Downstream 100 bases:

>100_bases
ACGCTGTCCTGACGGCGCCACCGCGACGGCCCCGGCTCAAGGCCGCGACTCCTTCGCCGGCGGGGATTCCACCGGCGCCT
TGCGCGGCGTCACCGCGGGC

Product: CinA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MDTLDELADFMKRHQLLLVTAESCTAGLIAAHLADVPGAGELLDCAFVTYSTEAKARCLEVDFGTIARHGLSSEAVAAEM
ARGALRHSRANVAIANTGVADNAGDGNTPPGTQCFAWAYRRADGGDQAEVFTETRRFHGDRNAVREAAAEYALLRIPHYC
APRGGA

Sequences:

>Translated_166_residues
MDTLDELADFMKRHQLLLVTAESCTAGLIAAHLADVPGAGELLDCAFVTYSTEAKARCLEVDFGTIARHGLSSEAVAAEM
ARGALRHSRANVAIANTGVADNAGDGNTPPGTQCFAWAYRRADGGDQAEVFTETRRFHGDRNAVREAAAEYALLRIPHYC
APRGGA
>Mature_166_residues
MDTLDELADFMKRHQLLLVTAESCTAGLIAAHLADVPGAGELLDCAFVTYSTEAKARCLEVDFGTIARHGLSSEAVAAEM
ARGALRHSRANVAIANTGVADNAGDGNTPPGTQCFAWAYRRADGGDQAEVFTETRRFHGDRNAVREAAAEYALLRIPHYC
APRGGA

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=156, Percent_Identity=40.3846153846154, Blast_Score=100, Evalue=4e-23,
Organism=Escherichia coli, GI1787818, Length=155, Percent_Identity=34.1935483870968, Blast_Score=77, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453 [H]

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]

EC number: NA

Molecular weight: Translated: 17649; Mature: 17649

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLDELADFMKRHQLLLVTAESCTAGLIAAHLADVPGAGELLDCAFVTYSTEAKARCLE
CCHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHEEECCCCCCEEEE
VDFGTIARHGLSSEAVAAEMARGALRHSRANVAIANTGVADNAGDGNTPPGTQCFAWAYR
CCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHH
RADGGDQAEVFTETRRFHGDRNAVREAAAEYALLRIPHYCAPRGGA
HCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHCCCCCCC
>Mature Secondary Structure
MDTLDELADFMKRHQLLLVTAESCTAGLIAAHLADVPGAGELLDCAFVTYSTEAKARCLE
CCHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHEEECCCCCCEEEE
VDFGTIARHGLSSEAVAAEMARGALRHSRANVAIANTGVADNAGDGNTPPGTQCFAWAYR
CCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHH
RADGGDQAEVFTETRRFHGDRNAVREAAAEYALLRIPHYCAPRGGA
HCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA