| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yhcV [H]
Identifier: 119898039
GI number: 119898039
Start: 1917567
End: 1918007
Strand: Direct
Name: yhcV [H]
Synonym: azo1748
Alternate gene names: 119898039
Gene position: 1917567-1918007 (Clockwise)
Preceding gene: 119898033
Following gene: 119898041
Centisome position: 43.82
GC content: 68.93
Gene sequence:
>441_bases ATGCTGGTACGCGACGCAATGACCCCGGATGTACGGATGGTGACCCCGAGCCAGAGCATTCACGATGCCGCCCGCCTGAT GGCGGAATGGGACGTGGGCTCCTTGCCGGTCAGCGAGGACGACCGCCTGGTCGGCATGCTCACCGACCGCGACATCACGA TCCGCGCGGTGGCGGCGGGGCGCTCGCCCGAGACGCCGGTGCGCGAGGTGATGAGCCGCGACGTGAAGTACTGTTTCGAC GACGACGAGGTGGAAAGCGTGGCCCACAACATGGGCGAGGTGCAGTTGCACCGGCTGGTGGTGCTGGACCACGACAAACG CATGGTGGGCATCGTCGCGCTGGCGGACATCGCGCAGTGCGAGGGCGCCGAGCCGGCCGGCGCCGCGGTGTGCGGCATCT CCGAACCCACCCATGGGGCCGCCTCGCGCTCCATGTCCTGA
Upstream 100 bases:
>100_bases CCCGCCTTCCGCAAATCGCGTGCCCTGGCCGGCGCGCCACGGGTACGGGGTTTGCAGCCCACTTGCAGAGCAGGACGACC CTGCCGAAGGAGGACAAATC
Downstream 100 bases:
>100_bases TCCGCCCGATGAAAGCCGCCCCTGCGCCCGGTGCTGCAGGGGCGGTTTGCGTTCACGGGGCGCTAGATCCTGCCCATCAG GAACAGCACCAGCACGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLVRDAMTPDVRMVTPSQSIHDAARLMAEWDVGSLPVSEDDRLVGMLTDRDITIRAVAAGRSPETPVREVMSRDVKYCFD DDEVESVAHNMGEVQLHRLVVLDHDKRMVGIVALADIAQCEGAEPAGAAVCGISEPTHGAASRSMS
Sequences:
>Translated_146_residues MLVRDAMTPDVRMVTPSQSIHDAARLMAEWDVGSLPVSEDDRLVGMLTDRDITIRAVAAGRSPETPVREVMSRDVKYCFD DDEVESVAHNMGEVQLHRLVVLDHDKRMVGIVALADIAQCEGAEPAGAAVCGISEPTHGAASRSMS >Mature_146_residues MLVRDAMTPDVRMVTPSQSIHDAARLMAEWDVGSLPVSEDDRLVGMLTDRDITIRAVAAGRSPETPVREVMSRDVKYCFD DDEVESVAHNMGEVQLHRLVVLDHDKRMVGIVALADIAQCEGAEPAGAAVCGISEPTHGAASRSMS
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 15785; Mature: 15785
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVRDAMTPDVRMVTPSQSIHDAARLMAEWDVGSLPVSEDDRLVGMLTDRDITIRAVAAG CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEEECC RSPETPVREVMSRDVKYCFDDDEVESVAHNMGEVQLHRLVVLDHDKRMVGIVALADIAQC CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCEEHHHHHHHHHHH EGAEPAGAAVCGISEPTHGAASRSMS CCCCCCCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MLVRDAMTPDVRMVTPSQSIHDAARLMAEWDVGSLPVSEDDRLVGMLTDRDITIRAVAAG CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEEECC RSPETPVREVMSRDVKYCFDDDEVESVAHNMGEVQLHRLVVLDHDKRMVGIVALADIAQC CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCEEHHHHHHHHHHH EGAEPAGAAVCGISEPTHGAASRSMS CCCCCCCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]