| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is rimK
Identifier: 119898036
GI number: 119898036
Start: 1914421
End: 1915890
Strand: Reverse
Name: rimK
Synonym: azo1745
Alternate gene names: NA
Gene position: 1915890-1914421 (Counterclockwise)
Preceding gene: 119898037
Following gene: 119898035
Centisome position: 43.78
GC content: 68.3
Gene sequence:
>1470_bases GTGACTACGCTGATCGTCGTCGATGACCCCGGGGACTGGCCCCCGGGCGGGGGCAGCATCAACGTGGTCCCCGCCCGCAG CTACCTCACCGACCCCGCCTTCGCCGAGGAACGCCCGGCGCGGGTGTTCAACCTGTGCCGTTCCTACCGCTACCAGAGCC TGGGCTACTACGTCTCGCTGCTGGCCGAAGCGCGCGGCCACAAGCCGTGGCCGCGCGCCGGCACCATCGAGGACCTGCAG TCGCAGAACCTGGTGCAGGTGCTCACCGCGCGGCTCAACCAGCTGGTCGAACAGACCCTGGCGCCGTTGAAGGCGGACCG CTTCGAGCTGAGCGTGTATTTCGGTCGCAACCTCGCGCAGCGCTACAACGTGCTCGCGGACCAGTTGTTCCAGCTGCTGC AGGCGCCGCTGCTGCGGGTGCGCTTCGAACGCGCGGGCGGGCACTGGCACACGCGCAGCATCCGCCTGGTGGGCATCGGC GAGCTTTCGGAGACGCACCGCAACTTCGTCTATGAAGCTGCGGCCACCCACTTCGCCGCGCGCGCGCGGCTGGCCGACCG CCGCCCTCAGGAGGAATACGCCCTGGCGATCCTGCACAACCCGGAGGGGCGCAACCTGCCCTCCAACCCGGCCGCGCTGG CCAAGTTCGCCGAAACCGGCGCCGCGCTCGGGATGCGGGTGGAGTTCATCACGCCGGGCGATTTCGGCCGGCTGCCCGAG TTCGACGCGCTCTTCATCCGCGACACCACCTTCGTGCACCACTACACCTACCGCTTCGCGCGCCGCGCCCAGGGTGAAGG GCTGGTGGTGATCGACGACCCCGACTCGATCCTGAAGTGCAACAACAAGGTCTACCTCGCCGAAATGCTGGCGCACCACA ACCTGCCCGCGCCGCGCACGCTGCTGATCCACCGCGACAACATCGACCAGGTGGCGCCGCTGCTGGCGCTGCCCTGCGTG CTGAAGCAGCCCGACAGCTCGTTCTCGTCCGGCGTGGACAAGGTGGAAACCGAGGCCGAGTTGCGCGAGAAGGTGGGTGC GCTGCTGGACAAGTCGGACCTGATCGTGGCGCAGGAATGGCTGCCCACCGAGTTCGACTGGCGCGTGGGCGTGCTCGACC GGCGGGTGGTCTTCGTGTGCAAGTACTACATGGCCAAGGACCACTGGCAGATCATGAACCACAGTGCCGCGCCGGAGCAC CGCGAGGGCCGCACCGAAGCGCTGGCGGTGGGCGAGGCGCCGGAGGACGTGGTGGAACTCGCGCTGACCGCGGCCAATCT GATCGGCGACGGCTTCTACGGCGTGGACATCAAACAGATCGGCAACCGCTGCTGCATCATCGAGATCAACGACAACCCCA ACGTGGATGCGGGCAACGAGGACGGCGTGCTGCGCGACGCGCTCTACCGCGAGGTGATGGGGGTATTCCTGCGCCGGCTG GAGCGCCGGCGCGAAGGAGGCGACGCATGA
Upstream 100 bases:
>100_bases GATGCCAACCTGCTGGTGCTGGCGCCGCGCCGCCGGCCCGAGGAGACCGCTCCATGAGCCTGCATCCGCACGCCCGCGAC AGCGCCGCGAGGACCGCATC
Downstream 100 bases:
>100_bases AGAACGACGCGGCCCCCGCGGCGCTGCCGGCCTTCGCCGGCTACGGCCTCGAAATCGAATACATGATCGTCGACCGGCTC CACCTCGACGTGAAGCCGAT
Product: ribosomal protein S6 modification protein-like protein
Products: NA
Alternate protein names: Glutathione Synthase/Ribosomal; RimK Domain Protein ATP-Grasp; Glutathione Synthase; Ribosomal Protein-Related Protein; RimK-Like ATP-Grasp Domain Family; Alpha-L-Glutamate Ligase Family Protein; RimK-Like ATP-Grasp; 30S Ribosomal Protein-Related Protein; GCN5-Related N-Acetyltransferase; Ribosomal Protein; Fused RimK-Like Domain/ Domain-Containing Protein; RimK Domain-Containing Protein; 30S Ribosomal Protein; Ribosomal Protein-Like Protein; Rimk Domain Protein ATP-Grasp; Glutathione Synthase/Ribosomal Glutaminyl Transferase; Ribosomal -Glutamic Acid Ligase
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MTTLIVVDDPGDWPPGGGSINVVPARSYLTDPAFAEERPARVFNLCRSYRYQSLGYYVSLLAEARGHKPWPRAGTIEDLQ SQNLVQVLTARLNQLVEQTLAPLKADRFELSVYFGRNLAQRYNVLADQLFQLLQAPLLRVRFERAGGHWHTRSIRLVGIG ELSETHRNFVYEAAATHFAARARLADRRPQEEYALAILHNPEGRNLPSNPAALAKFAETGAALGMRVEFITPGDFGRLPE FDALFIRDTTFVHHYTYRFARRAQGEGLVVIDDPDSILKCNNKVYLAEMLAHHNLPAPRTLLIHRDNIDQVAPLLALPCV LKQPDSSFSSGVDKVETEAELREKVGALLDKSDLIVAQEWLPTEFDWRVGVLDRRVVFVCKYYMAKDHWQIMNHSAAPEH REGRTEALAVGEAPEDVVELALTAANLIGDGFYGVDIKQIGNRCCIIEINDNPNVDAGNEDGVLRDALYREVMGVFLRRL ERRREGGDA
Sequences:
>Translated_489_residues MTTLIVVDDPGDWPPGGGSINVVPARSYLTDPAFAEERPARVFNLCRSYRYQSLGYYVSLLAEARGHKPWPRAGTIEDLQ SQNLVQVLTARLNQLVEQTLAPLKADRFELSVYFGRNLAQRYNVLADQLFQLLQAPLLRVRFERAGGHWHTRSIRLVGIG ELSETHRNFVYEAAATHFAARARLADRRPQEEYALAILHNPEGRNLPSNPAALAKFAETGAALGMRVEFITPGDFGRLPE FDALFIRDTTFVHHYTYRFARRAQGEGLVVIDDPDSILKCNNKVYLAEMLAHHNLPAPRTLLIHRDNIDQVAPLLALPCV LKQPDSSFSSGVDKVETEAELREKVGALLDKSDLIVAQEWLPTEFDWRVGVLDRRVVFVCKYYMAKDHWQIMNHSAAPEH REGRTEALAVGEAPEDVVELALTAANLIGDGFYGVDIKQIGNRCCIIEINDNPNVDAGNEDGVLRDALYREVMGVFLRRL ERRREGGDA >Mature_488_residues TTLIVVDDPGDWPPGGGSINVVPARSYLTDPAFAEERPARVFNLCRSYRYQSLGYYVSLLAEARGHKPWPRAGTIEDLQS QNLVQVLTARLNQLVEQTLAPLKADRFELSVYFGRNLAQRYNVLADQLFQLLQAPLLRVRFERAGGHWHTRSIRLVGIGE LSETHRNFVYEAAATHFAARARLADRRPQEEYALAILHNPEGRNLPSNPAALAKFAETGAALGMRVEFITPGDFGRLPEF DALFIRDTTFVHHYTYRFARRAQGEGLVVIDDPDSILKCNNKVYLAEMLAHHNLPAPRTLLIHRDNIDQVAPLLALPCVL KQPDSSFSSGVDKVETEAELREKVGALLDKSDLIVAQEWLPTEFDWRVGVLDRRVVFVCKYYMAKDHWQIMNHSAAPEHR EGRTEALAVGEAPEDVVELALTAANLIGDGFYGVDIKQIGNRCCIIEINDNPNVDAGNEDGVLRDALYREVMGVFLRRLE RRREGGDA
Specific function: Unknown
COG id: COG0189
COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54960; Mature: 54829
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLIVVDDPGDWPPGGGSINVVPARSYLTDPAFAEERPARVFNLCRSYRYQSLGYYVSL CEEEEEEECCCCCCCCCCEEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LAEARGHKPWPRAGTIEDLQSQNLVQVLTARLNQLVEQTLAPLKADRFELSVYFGRNLAQ HHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHH RYNVLADQLFQLLQAPLLRVRFERAGGHWHTRSIRLVGIGELSETHRNFVYEAAATHFAA HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECEEEEEEECCHHHHHHHHHHHHHHHHHHH RARLADRRPQEEYALAILHNPEGRNLPSNPAALAKFAETGAALGMRVEFITPGDFGRLPE HHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCHHHCEEEEEECCCCCCCCCC FDALFIRDTTFVHHYTYRFARRAQGEGLVVIDDPDSILKCNNKVYLAEMLAHHNLPAPRT CCEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCEEHHHHHHHHCCCCCCCE LLIHRDNIDQVAPLLALPCVLKQPDSSFSSGVDKVETEAELREKVGALLDKSDLIVAQEW EEEECCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCC LPTEFDWRVGVLDRRVVFVCKYYMAKDHWQIMNHSAAPEHREGRTEALAVGEAPEDVVEL CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHH ALTAANLIGDGFYGVDIKQIGNRCCIIEINDNPNVDAGNEDGVLRDALYREVMGVFLRRL HHHHHHHHCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ERRREGGDA HHHHCCCCC >Mature Secondary Structure TTLIVVDDPGDWPPGGGSINVVPARSYLTDPAFAEERPARVFNLCRSYRYQSLGYYVSL EEEEEEECCCCCCCCCCEEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LAEARGHKPWPRAGTIEDLQSQNLVQVLTARLNQLVEQTLAPLKADRFELSVYFGRNLAQ HHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHH RYNVLADQLFQLLQAPLLRVRFERAGGHWHTRSIRLVGIGELSETHRNFVYEAAATHFAA HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECEEEEEEECCHHHHHHHHHHHHHHHHHHH RARLADRRPQEEYALAILHNPEGRNLPSNPAALAKFAETGAALGMRVEFITPGDFGRLPE HHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCHHHCEEEEEECCCCCCCCCC FDALFIRDTTFVHHYTYRFARRAQGEGLVVIDDPDSILKCNNKVYLAEMLAHHNLPAPRT CCEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCEEHHHHHHHHCCCCCCCE LLIHRDNIDQVAPLLALPCVLKQPDSSFSSGVDKVETEAELREKVGALLDKSDLIVAQEW EEEECCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCC LPTEFDWRVGVLDRRVVFVCKYYMAKDHWQIMNHSAAPEHREGRTEALAVGEAPEDVVEL CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHH ALTAANLIGDGFYGVDIKQIGNRCCIIEINDNPNVDAGNEDGVLRDALYREVMGVFLRRL HHHHHHHHCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ERRREGGDA HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA