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The map label for this gene is tex [H]

Identifier: 119897950

GI number: 119897950

Start: 1818545

End: 1820866

Strand: Reverse

Name: tex [H]

Synonym: azo1659

Alternate gene names: 119897950

Gene position: 1820866-1818545 (Counterclockwise)

Preceding gene: 119897951

Following gene: 119897949

Centisome position: 41.61

GC content: 68.82

Gene sequence:

>2322_bases
ATGCTGCCCCCGATCGAACACCGCATTGCCGATGAAATCGGCGTCTCCCCCCGCCAGGTGATGGCGGCCGTGCAACTGCT
CGACGACGGCGCCACGGTGCCCTTCGTCGCGCGCTACCGCAAGGAAGCGACCGGCGGGCTGGACGACACCCAACTGCGCA
CGCTGGAAGAGCGGCTTGGCTACCTGCGCGAACTCGAAGACCGCCGCGCCACCGTGATCGCCTCGATCGACGAGCAAGGC
AAGCTCACCCCCGCGCTGCGCGCCGAGGTCGAGAACGCCGACACCAAGCAGCGCCTCGAAGACCTCTACCTGCCCTACAA
ACCCAAGCGGCGCACCAAGGCCCAGATCGCCCGCGAAGCCGGCCTCGGCCCGCTCGCCGAAAGTCTGCTGGCCGATCCGA
CGCTGGACCCGGAAGCCGAGGCGGCGAAGTACTTCAACGTCGAAGCCGGCTTCGCCGACACCAAGGCCACGCTGGACGGC
GCCCGCCAGATCCTGATCGAACAGTTCGCCGAAGACGCCGCGCTGCTCGGGGAATTGCGCGACTACCTGCAGGAACACGG
CGAGGTGCGTTCCTCGGTGATCGAAGGCAAGGAGAACGAGGGTGCCAAGTTCCGCGACTGGTTCGACTTCCGCGAGCCGA
TCGCCACCCTGCCCTCGCACCGCGCGCTGGCGCTGCTGCGCGGCCGCAACGAAGGCGTGCTGCGGCTCGCGCTCGATGTC
GATCGCCCCGACGCGGACGCACCCCACCCCTGCGAAGGCCGCATCGCCGCGCGCTTCGGCATCCGCAACCAGGGCCGCGC
CGCCGACCGGTGGCTGGCCGACACCGTGCGCTGGGCGTGGAGCGTGAAGATCTCGCTGCACCTCGAACTGGAGTTGATGG
GCCAGTTGCGCGAGCGTGCCGAAGAGGAAGCGATCCGCGTCTTCGCGCGCAACCTCAAGGACCTGCTGCTCGCCGCGCCC
GCCGGCACCCGCGCCACCATGGGCCTGGACCCCGGCATCCGCACCGGCGTGAAGGTCGCGGTGGTCGACGCCACCGGCAA
GCTGGTCGATACCGCCACCGTCTACCCCTTCGAGCCGCGCCGCGACCGCGAAGGCACGCTGGCCACGCTGGCGGTGCTGG
CGAAGAAACACAACGTGGAGCTGATCGCGATAGGCAACGGCACCGCCTCGCGCGAAACCGATGCCCTCGCCGCCGAGCTG
CTCAAGCGCCATCCGGAGTTCAAGCTGACCAAGGTGGTGGTGTCCGAAGCCGGCGCCTCGGTGTATTCCGCTTCCGAACT
CGCGGCGCGCGAATTCCCGGATGTGGACGTGTCGTTGCGCGGCGCGGTGTCGATCGCCCGCCGCCTGCAGGACCCGCTCG
CGGAACTGGTGAAGATCGACCCGAAGTCGATCGGCGTCGGCCAGTACCAGCACGACGTGAACCAGGGCAAGCTCGCCAAG
AGTCTGGACGCGGTGGTGGAAGACTGCGTGAACGCGGTCGGCGTGGATGTGAACACCGCCTCTGCGCCGCTGCTGGCGCG
CATCTCCGGGCTCAATGCCACGCTCGCCGCCAACATCGTCGAGCACCGCAACGCCAATGGGCCGTTTGCCAGCCGCGACG
CGCTGAAGAACGTGCCCCGCCTCGGCCCCAAGACCTTCGAGCAGGCCGCCGGCTTCCTGCGCATTCCCGCCGGCGACAAC
CCGCTCGATGCGTCTTCGGTCCACCCCGAAGCCTATCCGGTGGTCGAACGCATCCTCGCCCGGGTGCAGAAGAGCGTGCG
CGAACTGATGGGCAACAGCAGCTTCCTCAAGGCCCTGAAGCCGGCGGAATTCACCGACGAACGCTTCGGCCTGCCGACGG
TGCAGGACATCCTCGCCGAACTCGAAAAGCCCGGCCGCGACCCGCGCCCCGAATTCCGCACCGCCAGCTTCCGCGAAGGC
ATCGAAACGCTGAAGGACCTGGAGCCCGGCATGATGCTGGAAGGCGTGGTCACCAACGTCACCAACTTCGGCGCTTTCGT
CGACATCGGCGTGCATCAGGACGGTCTGGTGCACATCTCGGCGTTGGCCGAACGCTTCGTCAAGGATCCGCACAGCGTGG
TCAAGGCGGGCCAGGTGGTGAAGGTCAAGGTGCTGGAAGTGGACATCCCGCGCAACCGCATCGCGCTGACCATGCGCATG
GGCGACGAGGCCGCCCCCAAGCGCGCCGACGATCAAGGCGGACGCCGTCCGGCCGCGGGCGGCCGTCCTGGCGGCCAGCG
CCCCGCTGCGCAGCGCCAGCCCGAGCGTGCCCCATCCAACAATGCGCTCGCCGCCGCATTCGCCCGCGCGCGCACCAAGT
AA

Upstream 100 bases:

>100_bases
TCCGCCGCGGCCTTGCCCCGGCGGCGGGCTTGCTGCACCATCCTGCCCCTTTTCCGCCGCGCCATGCCGGCGCGGCCTCC
GCTTCAATCAGCCGAACGAC

Downstream 100 bases:

>100_bases
GCGGAATTCACCATGACGGTCGTCTACGGCATCAAGAACTGCGACACGATGAAGAAGGCCTTCAGCTGGCTCGGCGAGCA
CGGCGTGGCCCATCGCTTCC

Product: transcription accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 773; Mature: 773

Protein sequence:

>773_residues
MLPPIEHRIADEIGVSPRQVMAAVQLLDDGATVPFVARYRKEATGGLDDTQLRTLEERLGYLRELEDRRATVIASIDEQG
KLTPALRAEVENADTKQRLEDLYLPYKPKRRTKAQIAREAGLGPLAESLLADPTLDPEAEAAKYFNVEAGFADTKATLDG
ARQILIEQFAEDAALLGELRDYLQEHGEVRSSVIEGKENEGAKFRDWFDFREPIATLPSHRALALLRGRNEGVLRLALDV
DRPDADAPHPCEGRIAARFGIRNQGRAADRWLADTVRWAWSVKISLHLELELMGQLRERAEEEAIRVFARNLKDLLLAAP
AGTRATMGLDPGIRTGVKVAVVDATGKLVDTATVYPFEPRRDREGTLATLAVLAKKHNVELIAIGNGTASRETDALAAEL
LKRHPEFKLTKVVVSEAGASVYSASELAAREFPDVDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQGKLAK
SLDAVVEDCVNAVGVDVNTASAPLLARISGLNATLAANIVEHRNANGPFASRDALKNVPRLGPKTFEQAAGFLRIPAGDN
PLDASSVHPEAYPVVERILARVQKSVRELMGNSSFLKALKPAEFTDERFGLPTVQDILAELEKPGRDPRPEFRTASFREG
IETLKDLEPGMMLEGVVTNVTNFGAFVDIGVHQDGLVHISALAERFVKDPHSVVKAGQVVKVKVLEVDIPRNRIALTMRM
GDEAAPKRADDQGGRRPAAGGRPGGQRPAAQRQPERAPSNNALAAAFARARTK

Sequences:

>Translated_773_residues
MLPPIEHRIADEIGVSPRQVMAAVQLLDDGATVPFVARYRKEATGGLDDTQLRTLEERLGYLRELEDRRATVIASIDEQG
KLTPALRAEVENADTKQRLEDLYLPYKPKRRTKAQIAREAGLGPLAESLLADPTLDPEAEAAKYFNVEAGFADTKATLDG
ARQILIEQFAEDAALLGELRDYLQEHGEVRSSVIEGKENEGAKFRDWFDFREPIATLPSHRALALLRGRNEGVLRLALDV
DRPDADAPHPCEGRIAARFGIRNQGRAADRWLADTVRWAWSVKISLHLELELMGQLRERAEEEAIRVFARNLKDLLLAAP
AGTRATMGLDPGIRTGVKVAVVDATGKLVDTATVYPFEPRRDREGTLATLAVLAKKHNVELIAIGNGTASRETDALAAEL
LKRHPEFKLTKVVVSEAGASVYSASELAAREFPDVDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQGKLAK
SLDAVVEDCVNAVGVDVNTASAPLLARISGLNATLAANIVEHRNANGPFASRDALKNVPRLGPKTFEQAAGFLRIPAGDN
PLDASSVHPEAYPVVERILARVQKSVRELMGNSSFLKALKPAEFTDERFGLPTVQDILAELEKPGRDPRPEFRTASFREG
IETLKDLEPGMMLEGVVTNVTNFGAFVDIGVHQDGLVHISALAERFVKDPHSVVKAGQVVKVKVLEVDIPRNRIALTMRM
GDEAAPKRADDQGGRRPAAGGRPGGQRPAAQRQPERAPSNNALAAAFARARTK
>Mature_773_residues
MLPPIEHRIADEIGVSPRQVMAAVQLLDDGATVPFVARYRKEATGGLDDTQLRTLEERLGYLRELEDRRATVIASIDEQG
KLTPALRAEVENADTKQRLEDLYLPYKPKRRTKAQIAREAGLGPLAESLLADPTLDPEAEAAKYFNVEAGFADTKATLDG
ARQILIEQFAEDAALLGELRDYLQEHGEVRSSVIEGKENEGAKFRDWFDFREPIATLPSHRALALLRGRNEGVLRLALDV
DRPDADAPHPCEGRIAARFGIRNQGRAADRWLADTVRWAWSVKISLHLELELMGQLRERAEEEAIRVFARNLKDLLLAAP
AGTRATMGLDPGIRTGVKVAVVDATGKLVDTATVYPFEPRRDREGTLATLAVLAKKHNVELIAIGNGTASRETDALAAEL
LKRHPEFKLTKVVVSEAGASVYSASELAAREFPDVDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQGKLAK
SLDAVVEDCVNAVGVDVNTASAPLLARISGLNATLAANIVEHRNANGPFASRDALKNVPRLGPKTFEQAAGFLRIPAGDN
PLDASSVHPEAYPVVERILARVQKSVRELMGNSSFLKALKPAEFTDERFGLPTVQDILAELEKPGRDPRPEFRTASFREG
IETLKDLEPGMMLEGVVTNVTNFGAFVDIGVHQDGLVHISALAERFVKDPHSVVKAGQVVKVKVLEVDIPRNRIALTMRM
GDEAAPKRADDQGGRRPAAGGRPGGQRPAAQRQPERAPSNNALAAAFARARTK

Specific function: Transcription accessory protein. Exact function not known [H]

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=782, Percent_Identity=35.2941176470588, Blast_Score=394, Evalue=1e-109,
Organism=Homo sapiens, GI27597090, Length=716, Percent_Identity=23.8826815642458, Blast_Score=108, Evalue=2e-23,
Organism=Escherichia coli, GI87082262, Length=758, Percent_Identity=64.9076517150396, Blast_Score=965, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=78, Percent_Identity=42.3076923076923, Blast_Score=70, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17511129, Length=735, Percent_Identity=29.9319727891156, Blast_Score=262, Evalue=6e-70,
Organism=Caenorhabditis elegans, GI17552892, Length=279, Percent_Identity=28.673835125448, Blast_Score=75, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6321552, Length=188, Percent_Identity=27.1276595744681, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI62484314, Length=774, Percent_Identity=31.0077519379845, Blast_Score=355, Evalue=5e-98,
Organism=Drosophila melanogaster, GI24640080, Length=558, Percent_Identity=21.6845878136201, Blast_Score=80, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 84260; Mature: 84260

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPPIEHRIADEIGVSPRQVMAAVQLLDDGATVPFVARYRKEATGGLDDTQLRTLEERLG
CCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
YLRELEDRRATVIASIDEQGKLTPALRAEVENADTKQRLEDLYLPYKPKRRTKAQIAREA
HHHHHHHCCEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHC
GLGPLAESLLADPTLDPEAEAAKYFNVEAGFADTKATLDGARQILIEQFAEDAALLGELR
CCCHHHHHHHCCCCCCCCHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLQEHGEVRSSVIEGKENEGAKFRDWFDFREPIATLPSHRALALLRGRNEGVLRLALDV
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEECCCCCEEEEEEEC
DRPDADAPHPCEGRIAARFGIRNQGRAADRWLADTVRWAWSVKISLHLELELMGQLRERA
CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHEEEEEEEEEEEHHHHHHHHHHHH
EEEAIRVFARNLKDLLLAAPAGTRATMGLDPGIRTGVKVAVVDATGKLVDTATVYPFEPR
HHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCEEEEEECCCCEEECEEECCCCCC
RDREGTLATLAVLAKKHNVELIAIGNGTASRETDALAAELLKRHPEFKLTKVVVSEAGAS
CCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCH
VYSASELAAREFPDVDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQGKLAK
HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHH
SLDAVVEDCVNAVGVDVNTASAPLLARISGLNATLAANIVEHRNANGPFASRDALKNVPR
HHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCC
LGPKTFEQAAGFLRIPAGDNPLDASSVHPEAYPVVERILARVQKSVRELMGNSSFLKALK
CCHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
PAEFTDERFGLPTVQDILAELEKPGRDPRPEFRTASFREGIETLKDLEPGMMLEGVVTNV
CCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
TNFGAFVDIGVHQDGLVHISALAERFVKDPHSVVKAGQVVKVKVLEVDIPRNRIALTMRM
HHCCCEEEECCCCCCCCHHHHHHHHHHCCHHHHHHCCCEEEEEEEEEECCCCEEEEEEEC
GDEAAPKRADDQGGRRPAAGGRPGGQRPAAQRQPERAPSNNALAAAFARARTK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MLPPIEHRIADEIGVSPRQVMAAVQLLDDGATVPFVARYRKEATGGLDDTQLRTLEERLG
CCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
YLRELEDRRATVIASIDEQGKLTPALRAEVENADTKQRLEDLYLPYKPKRRTKAQIAREA
HHHHHHHCCEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHC
GLGPLAESLLADPTLDPEAEAAKYFNVEAGFADTKATLDGARQILIEQFAEDAALLGELR
CCCHHHHHHHCCCCCCCCHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLQEHGEVRSSVIEGKENEGAKFRDWFDFREPIATLPSHRALALLRGRNEGVLRLALDV
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEECCCCCEEEEEEEC
DRPDADAPHPCEGRIAARFGIRNQGRAADRWLADTVRWAWSVKISLHLELELMGQLRERA
CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHEEEEEEEEEEEHHHHHHHHHHHH
EEEAIRVFARNLKDLLLAAPAGTRATMGLDPGIRTGVKVAVVDATGKLVDTATVYPFEPR
HHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCEEEEEECCCCEEECEEECCCCCC
RDREGTLATLAVLAKKHNVELIAIGNGTASRETDALAAELLKRHPEFKLTKVVVSEAGAS
CCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCH
VYSASELAAREFPDVDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQGKLAK
HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHH
SLDAVVEDCVNAVGVDVNTASAPLLARISGLNATLAANIVEHRNANGPFASRDALKNVPR
HHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCC
LGPKTFEQAAGFLRIPAGDNPLDASSVHPEAYPVVERILARVQKSVRELMGNSSFLKALK
CCHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
PAEFTDERFGLPTVQDILAELEKPGRDPRPEFRTASFREGIETLKDLEPGMMLEGVVTNV
CCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
TNFGAFVDIGVHQDGLVHISALAERFVKDPHSVVKAGQVVKVKVLEVDIPRNRIALTMRM
HHCCCEEEECCCCCCCCHHHHHHHHHHCCHHHHHHCCCEEEEEEEEEECCCCEEEEEEEC
GDEAAPKRADDQGGRRPAAGGRPGGQRPAAQRQPERAPSNNALAAAFARARTK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8755871; 12910271 [H]