| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is fabI1 [H]
Identifier: 119897860
GI number: 119897860
Start: 1726037
End: 1726828
Strand: Reverse
Name: fabI1 [H]
Synonym: azo1569
Alternate gene names: 119897860
Gene position: 1726828-1726037 (Counterclockwise)
Preceding gene: 119897866
Following gene: 119897858
Centisome position: 39.46
GC content: 64.02
Gene sequence:
>792_bases ATGGGCTTTCTCGCCGGCAAACGCATCCTCATCACCGGTCTGCTCAGCAATCGCTCGATTGCCTACGGCATTGCCAAAGC CATGCATCGCGAAGGCGCGCAACTCGCGTTCACCTACCAGAACGAGCGGTTCCAGGAGCGCGTGGCGAAGATGGCCGCGG ACTTCGACAGCGACATGCTGTACGCCTGTGACGTTCAGAACGACGCCGAGATCAACGCCCTTTTCGAGCAGCTCGCCCAG AAATGGGATGGCCTCGACGGTCTGGTGCACTCCATCGCTTTCGCGCCGAGCGACGCGCTCGAAGGCGACTTCCTCGACGG TTTCTCGCGTGAAGCGTTCCGCATCTCGCAGGAAGTCAGCGCCTACAGTTTCCCGGCGCTGGCCAAGGCCGCCCGCCCGC TGATGAAGGGCCGCAATGGCGCGCTGCTGACGCTGTCGTATCTCGGCGCGGTGCGCACCATGCCCAACTACAACATCATG GGCCTGGCCAAGGCCAGCCTCGAAGCCTCGGTGCGCTACATGGCCGTTTGCGTGGGCCCCGAAGGCACCCGCGTCAACGC GATCTCGGCGGGTCCGATCAAGACCCTGGCGGCCTCGGGCATCGGCAGCTTCGGCAAGCTACTGGCGTTCAACGAGCGCA ATGCGCCGCTGCGCCGTAACGTCACCATCGACGAAGTCGGCAACGCCGCCGCGTTCATGTGCTCCGATCTGGCCAGCGGC ATCACCGGCGAAGTCATGTACGTCGATGCCGGATTCAACACCACCGCGCTCGGCAACTCCGAACAGGTCTGA
Upstream 100 bases:
>100_bases CGCACAGACCACCGGGCGCGCGCAGGGCGGCCGCCAACAACCCTAAGCAGAGGGCAGTTTTGGCTATAATCCTTGGCTCT GTCATTCGGAGCTGTACTAC
Downstream 100 bases:
>100_bases ACCCGACGCGCGCGGCACACCGCCGCCGCATGAAAAAACGCCCGGCTTGGACCGGGCGTTTTTCTTTTTGCCACTGTCCG CTATTCGCGCGGCGGGGCGG
Product: enoyl-acyl carrier protein reductase
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MGFLAGKRILITGLLSNRSIAYGIAKAMHREGAQLAFTYQNERFQERVAKMAADFDSDMLYACDVQNDAEINALFEQLAQ KWDGLDGLVHSIAFAPSDALEGDFLDGFSREAFRISQEVSAYSFPALAKAARPLMKGRNGALLTLSYLGAVRTMPNYNIM GLAKASLEASVRYMAVCVGPEGTRVNAISAGPIKTLAASGIGSFGKLLAFNERNAPLRRNVTIDEVGNAAAFMCSDLASG ITGEVMYVDAGFNTTALGNSEQV
Sequences:
>Translated_263_residues MGFLAGKRILITGLLSNRSIAYGIAKAMHREGAQLAFTYQNERFQERVAKMAADFDSDMLYACDVQNDAEINALFEQLAQ KWDGLDGLVHSIAFAPSDALEGDFLDGFSREAFRISQEVSAYSFPALAKAARPLMKGRNGALLTLSYLGAVRTMPNYNIM GLAKASLEASVRYMAVCVGPEGTRVNAISAGPIKTLAASGIGSFGKLLAFNERNAPLRRNVTIDEVGNAAAFMCSDLASG ITGEVMYVDAGFNTTALGNSEQV >Mature_262_residues GFLAGKRILITGLLSNRSIAYGIAKAMHREGAQLAFTYQNERFQERVAKMAADFDSDMLYACDVQNDAEINALFEQLAQK WDGLDGLVHSIAFAPSDALEGDFLDGFSREAFRISQEVSAYSFPALAKAARPLMKGRNGALLTLSYLGAVRTMPNYNIMG LAKASLEASVRYMAVCVGPEGTRVNAISAGPIKTLAASGIGSFGKLLAFNERNAPLRRNVTIDEVGNAAAFMCSDLASGI TGEVMYVDAGFNTTALGNSEQV
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Homo sapiens, GI7705925, Length=252, Percent_Identity=26.5873015873016, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI32483357, Length=257, Percent_Identity=24.5136186770428, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI5031737, Length=261, Percent_Identity=26.4367816091954, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1787545, Length=261, Percent_Identity=60.1532567049808, Blast_Score=329, Evalue=1e-91, Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=27.7992277992278, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787905, Length=193, Percent_Identity=28.4974093264249, Blast_Score=62, Evalue=3e-11, Organism=Drosophila melanogaster, GI23397609, Length=252, Percent_Identity=26.984126984127, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24644339, Length=260, Percent_Identity=26.5384615384615, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24644337, Length=193, Percent_Identity=28.4974093264249, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 28160; Mature: 28029
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLAGKRILITGLLSNRSIAYGIAKAMHREGAQLAFTYQNERFQERVAKMAADFDSDML CCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEE YACDVQNDAEINALFEQLAQKWDGLDGLVHSIAFAPSDALEGDFLDGFSREAFRISQEVS EEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHH AYSFPALAKAARPLMKGRNGALLTLSYLGAVRTMPNYNIMGLAKASLEASVRYMAVCVGP HHCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCEEEEEHHHHHCCEEEEEEEECC EGTRVNAISAGPIKTLAASGIGSFGKLLAFNERNAPLRRNVTIDEVGNAAAFMCSDLASG CCCEEEEEECCCHHHHHHHCCCCHHHEEEECCCCCCCCCCCCHHHHCCHHHHHHHHHHCC ITGEVMYVDAGFNTTALGNSEQV CCCEEEEEECCCCEEECCCCCCC >Mature Secondary Structure GFLAGKRILITGLLSNRSIAYGIAKAMHREGAQLAFTYQNERFQERVAKMAADFDSDML CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEE YACDVQNDAEINALFEQLAQKWDGLDGLVHSIAFAPSDALEGDFLDGFSREAFRISQEVS EEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHH AYSFPALAKAARPLMKGRNGALLTLSYLGAVRTMPNYNIMGLAKASLEASVRYMAVCVGP HHCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCEEEEEHHHHHCCEEEEEEEECC EGTRVNAISAGPIKTLAASGIGSFGKLLAFNERNAPLRRNVTIDEVGNAAAFMCSDLASG CCCEEEEEECCCHHHHHHHCCCCHHHEEEECCCCCCCCCCCCHHHHCCHHHHHHHHHHCC ITGEVMYVDAGFNTTALGNSEQV CCCEEEEEECCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]