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The map label for this gene is ynfM [H]

Identifier: 119897833

GI number: 119897833

Start: 1689373

End: 1690617

Strand: Reverse

Name: ynfM [H]

Synonym: azo1542

Alternate gene names: 119897833

Gene position: 1690617-1689373 (Counterclockwise)

Preceding gene: 119897837

Following gene: 119897824

Centisome position: 38.63

GC content: 71.57

Gene sequence:

>1245_bases
ATGTCCGTCCCAGCCTCCCCCACCCTCGGCGCCGCCGGCGCGCCCGCCCCGAGCGGCCCGCTCGAAGCCGGCACGCCGGC
CTTCCGCCACGCCAGCCTGGCCATGTTCCTGGGCGGCTTCGCTACCTTTGCGATGTTGTACGGCACCCAGCCGATGCTGC
CGCTGCTGGCATCGGTGTTCGAGGTCAGTCCTGCCCATGCGAGCCTTTCGGTTTCGGCGGGCACCGGCGCACTGGCGCTC
AGCCTGATTCCGGCCAGCGTGCTGTCCGACCGCTACGGGCGCGAACCGGTGATGAAGCTCGCGCTGGCGCTGGCCGCGGT
GATTGCGCTGGCAAGCGCGGCGGTTACCGACTTCACCACGCTGCTGGTGCTGCGCGCGCTGCTCGGGGTCGTGCTGGCGG
GCCTGCCGGCGGCGGCGATGGCCTACCTGGGCGAAGAGGTGGCCCCCAACGCGCAAGGGCGGGCGATGGGCCTCTACATC
GCCGGCAATGCCTGCGGCGGCATGAGCGGGCGCTTCCTCGCCGCGCTCGTCACCGAATGGGGCTCATGGCGGCTGGCACT
GGTGGTGCTCGGCGTGCTCGGAGGGATCGCCGCGGTGGTGTTCTGGCGCGGCCTGCCAGCCTCTCGCCATTTCCGCGCCC
GCGCGGCCACCCCGATGCGCATCCTGCGCGACGCGCTCGCAATCTTCCGCGACGCCGGCCTGCCCTGGCTGTTCCTCACG
GCCTTCCTGATCATGGGTGCCTTCGTCGGGCTCTACAACTACCTCGGTTTCCGCCTGCAGGGCGCGCCCTACAACCTCGG
CCAGATTGCCACCGGGTCGATCTTCCTGCTCTACCTGCTCGGCACCTGGGCATCAGCCTGGGTCGGGCGGCTCGCCGACC
GCTTCGGCCGCCGCAACGTGCTGTGGATGATGGTGTGCCTGATGGGCGCGGGCCTGGCGCTGACGCTGGCCGAGCCGCTG
CCGCTGCTGGTGCTGGGCATGGGGGTGTTCACCTTCGGCTTCTTCGCCACCCACACGACCGCCAGCGGCTGGGTCAGCCG
TCGCGCCCAGGAGCGCCGCGCGCTCGCCGCGGCGCTTTATCTCAGCGCGTACTACCTGGGCGGCAGCGTGATCGGCAGCG
CCGCCGGCCTGGCCTGGAGCGATGCCGGCTGGGGCGGGCTGGTACTGCTGCTAGGGCTGGGTGCATTGCTCACGCTGGCG
CTGGCACTGTGGCTGCGGCGCATTCCGCAGGTTCAGACGGGCTGA

Upstream 100 bases:

>100_bases
AAAAGTATCAATCGACACTAAAGAATATATTGGACTGCGTATTCGCGCACACCTAGCATCACTGTATGGCTCGCCTTGAG
CCCACAGGAACCCCGCAGCA

Downstream 100 bases:

>100_bases
ACCGTCGCCAGTCGCGCTCAGCGATAGCCCTCTTCACGCAGCACCTGCTGCACCACGGGCCGCGCCCGCATTCGCTGATA
GTGGGCGGCGCAGTTGGGCG

Product: putative membrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSVPASPTLGAAGAPAPSGPLEAGTPAFRHASLAMFLGGFATFAMLYGTQPMLPLLASVFEVSPAHASLSVSAGTGALAL
SLIPASVLSDRYGREPVMKLALALAAVIALASAAVTDFTTLLVLRALLGVVLAGLPAAAMAYLGEEVAPNAQGRAMGLYI
AGNACGGMSGRFLAALVTEWGSWRLALVVLGVLGGIAAVVFWRGLPASRHFRARAATPMRILRDALAIFRDAGLPWLFLT
AFLIMGAFVGLYNYLGFRLQGAPYNLGQIATGSIFLLYLLGTWASAWVGRLADRFGRRNVLWMMVCLMGAGLALTLAEPL
PLLVLGMGVFTFGFFATHTTASGWVSRRAQERRALAAALYLSAYYLGGSVIGSAAGLAWSDAGWGGLVLLLGLGALLTLA
LALWLRRIPQVQTG

Sequences:

>Translated_414_residues
MSVPASPTLGAAGAPAPSGPLEAGTPAFRHASLAMFLGGFATFAMLYGTQPMLPLLASVFEVSPAHASLSVSAGTGALAL
SLIPASVLSDRYGREPVMKLALALAAVIALASAAVTDFTTLLVLRALLGVVLAGLPAAAMAYLGEEVAPNAQGRAMGLYI
AGNACGGMSGRFLAALVTEWGSWRLALVVLGVLGGIAAVVFWRGLPASRHFRARAATPMRILRDALAIFRDAGLPWLFLT
AFLIMGAFVGLYNYLGFRLQGAPYNLGQIATGSIFLLYLLGTWASAWVGRLADRFGRRNVLWMMVCLMGAGLALTLAEPL
PLLVLGMGVFTFGFFATHTTASGWVSRRAQERRALAAALYLSAYYLGGSVIGSAAGLAWSDAGWGGLVLLLGLGALLTLA
LALWLRRIPQVQTG
>Mature_413_residues
SVPASPTLGAAGAPAPSGPLEAGTPAFRHASLAMFLGGFATFAMLYGTQPMLPLLASVFEVSPAHASLSVSAGTGALALS
LIPASVLSDRYGREPVMKLALALAAVIALASAAVTDFTTLLVLRALLGVVLAGLPAAAMAYLGEEVAPNAQGRAMGLYIA
GNACGGMSGRFLAALVTEWGSWRLALVVLGVLGGIAAVVFWRGLPASRHFRARAATPMRILRDALAIFRDAGLPWLFLTA
FLIMGAFVGLYNYLGFRLQGAPYNLGQIATGSIFLLYLLGTWASAWVGRLADRFGRRNVLWMMVCLMGAGLALTLAEPLP
LLVLGMGVFTFGFFATHTTASGWVSRRAQERRALAAALYLSAYYLGGSVIGSAAGLAWSDAGWGGLVLLLGLGALLTLAL
ALWLRRIPQVQTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=404, Percent_Identity=41.0891089108911, Blast_Score=303, Evalue=2e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43069; Mature: 42937

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPASPTLGAAGAPAPSGPLEAGTPAFRHASLAMFLGGFATFAMLYGTQPMLPLLASVF
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EVSPAHASLSVSAGTGALALSLIPASVLSDRYGREPVMKLALALAAVIALASAAVTDFTT
HCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLVLRALLGVVLAGLPAAAMAYLGEEVAPNAQGRAMGLYIAGNACGGMSGRFLAALVTEW
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH
GSWRLALVVLGVLGGIAAVVFWRGLPASRHFRARAATPMRILRDALAIFRDAGLPWLFLT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHH
AFLIMGAFVGLYNYLGFRLQGAPYNLGQIATGSIFLLYLLGTWASAWVGRLADRFGRRNV
HHHHHHHHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LWMMVCLMGAGLALTLAEPLPLLVLGMGVFTFGFFATHTTASGWVSRRAQERRALAAALY
HHHHHHHHHCCCEEEHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LSAYYLGGSVIGSAAGLAWSDAGWGGLVLLLGLGALLTLALALWLRRIPQVQTG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SVPASPTLGAAGAPAPSGPLEAGTPAFRHASLAMFLGGFATFAMLYGTQPMLPLLASVF
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EVSPAHASLSVSAGTGALALSLIPASVLSDRYGREPVMKLALALAAVIALASAAVTDFTT
HCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLVLRALLGVVLAGLPAAAMAYLGEEVAPNAQGRAMGLYIAGNACGGMSGRFLAALVTEW
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH
GSWRLALVVLGVLGGIAAVVFWRGLPASRHFRARAATPMRILRDALAIFRDAGLPWLFLT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHH
AFLIMGAFVGLYNYLGFRLQGAPYNLGQIATGSIFLLYLLGTWASAWVGRLADRFGRRNV
HHHHHHHHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LWMMVCLMGAGLALTLAEPLPLLVLGMGVFTFGFFATHTTASGWVSRRAQERRALAAALY
HHHHHHHHHCCCEEEHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LSAYYLGGSVIGSAAGLAWSDAGWGGLVLLLGLGALLTLALALWLRRIPQVQTG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]