| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is ybcJ [C]
Identifier: 119897819
GI number: 119897819
Start: 1671664
End: 1671888
Strand: Direct
Name: ybcJ [C]
Synonym: azo1528
Alternate gene names: 119897819
Gene position: 1671664-1671888 (Clockwise)
Preceding gene: 119897817
Following gene: 119897822
Centisome position: 38.2
GC content: 69.33
Gene sequence:
>225_bases ATGTCCATCCGCTTTGCCGTCCGCGGCGATTACATCCAGCTCGACCAACTGCTGAAGGCCGCCAATCTCGTGTCGTCCGG CGGCGAAGCCCATGCCGCGGTGGAAGCCGGTGCCGTGAAGGTGGACGGCCGGCCCGAGTCGCGCAAGCGCGCCAAGCTGC GTCCCGGGCAGCGCGTCCGCTTCGGCGCCGAGGAGATCGTGCTGGTGGGCGCCGAAGACGCTTGA
Upstream 100 bases:
>100_bases CGCCGCTGGTCATGTAAGCCTCGGGCGGGGGACAATCGCCGTATTGTGACACGACCATCCCGGCCCACAGCGCGCCGGCC CGCTCAAGGAATCCGTAACA
Downstream 100 bases:
>100_bases GCGTCCGCCAGGCCTACGGCAGCACGCGGCGCGCGGTCGCCGCGCGGTTGCGATGGGCGGCGATGCGCTCCCACACCCAG CCGCCGGGCAGGTCCTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MSIRFAVRGDYIQLDQLLKAANLVSSGGEAHAAVEAGAVKVDGRPESRKRAKLRPGQRVRFGAEEIVLVGAEDA
Sequences:
>Translated_74_residues MSIRFAVRGDYIQLDQLLKAANLVSSGGEAHAAVEAGAVKVDGRPESRKRAKLRPGQRVRFGAEEIVLVGAEDA >Mature_73_residues SIRFAVRGDYIQLDQLLKAANLVSSGGEAHAAVEAGAVKVDGRPESRKRAKLRPGQRVRFGAEEIVLVGAEDA
Specific function: Unknown
COG id: COG2501
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7903; Mature: 7772
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS50889 S4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRFAVRGDYIQLDQLLKAANLVSSGGEAHAAVEAGAVKVDGRPESRKRAKLRPGQRVR CCEEEEEECCEEEHHHHHHHHHHHCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCEEE FGAEEIVLVGAEDA ECCCEEEEEECCCC >Mature Secondary Structure SIRFAVRGDYIQLDQLLKAANLVSSGGEAHAAVEAGAVKVDGRPESRKRAKLRPGQRVR CEEEEEECCEEEHHHHHHHHHHHCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCEEE FGAEEIVLVGAEDA ECCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA