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The map label for this gene is tcp [H]

Identifier: 119897745

GI number: 119897745

Start: 1584776

End: 1587298

Strand: Direct

Name: tcp [H]

Synonym: azo1454

Alternate gene names: 119897745

Gene position: 1584776-1587298 (Clockwise)

Preceding gene: 119897744

Following gene: 119897746

Centisome position: 36.21

GC content: 70.15

Gene sequence:

>2523_bases
ATGAAAACCGCGGACGTGACCCAGCGCGAGATCGAGGTCCTGCCGCACCAGTCGCTGGTGTCCAAGACCGATCTGGACGG
TCGCATCACCTATGCGAGCCCGGATTTCATCGAGATCAGCGGGTTCTCCGAGCAGGAGCTGATCGGCGCCAAGCACAATG
TGGTGCGCCATCCCGACATGCCGGCCGAGGTCTTCGAGGACATGTGGCGCGACCTGCTGGCGGGGCGGCCGTGGTCGGGC
ATCATCAAGAACCGCTGTCGCAACGGCGACCATTACTGGGTCGAAGGCAATGCCGCGCCCATCGTCGAGAACGGACGCGT
CGTCGGCTTCATGTCGGTGCGCGGACGGGCTTCGCGTGAGCAGGTAGCGGCGGCCGAGCAGAACTACCGGCTGTTCCGTG
AGGGCCGCGCCGGGCACCGCCGCGTGCGCCACGGCCGCGTCGTGTCGGGCCGGCTCGGGGGGCGGCTGGTGCGCGGTTTC
CGCGATCTGCCGCTCGGCATCAAGCTCGGCATCGCGCTGACGCTGATTTCCTTGCTCGCGGTCGTGGTCGCGGCGAGCGG
CTGGCTGGGCATCGGCCACGCACTGGACGGCTCGACGGTGGGCGGGGAAGGAGAGATCGCCTTCTATCGCAACGCGATGC
TGGCCTCGGTCGTCCTGTTGCTTGCGGCGGCCGCAGGTGCGCTGACGCTGGTGGTGACAACCGTGCGGCGTCCGCTGCGC
GAGGCCCGCCAGGCCTTTGCGCTGATGGCCGAAGGCCGCTTCCACAGCGAGTTCGATATCAGCCGCGACGACGAATTCGG
CCGCCTGCTGCAGCAACTCAAGTCCATGCAGACCCGGCTGGGCTATGAAATGCAGGAGCAGCAGCGCCTGCTGGCGGAAA
ACCGCCGCATCCGCCAGGCGCTCGACTGCGTCGATACCAATGTGCGCATCGCCGACAACGGCGGCCGCGTGATCTACGCC
AACCGCGCACTGATGCGCACGCTGCGCCGCCTCGAACCCGAGCTGCGCCAGAGCCTGCCCGGCTTCGCCGCCGACCGCTT
CGTCGGCAGCAGCATCGGCGACATGTATGCCGACCCGCGCGAGGCGCTGCAACGGCTGGCGGGGCTGCGTGAAACCGGCC
GTATCGAGATGCCGATCGGGCGTCGGATGTTCATCGTGACGACCAATCCCATCCTCGACGAGCAGGGCAACAAGCTCGGC
ACGGTGGGCGAATGGCGCGACCGCACCGAGGAGATCGCGGCCGAACAGGCGCTGACCGGTCTGGTGGAAGCGGCGGCGGC
GGGGGACTTCAGCCGTCGGCTGCCGGTGGAGAACAAGAGCGGCTTCTTCCTGCAGCTGGCCGAAGGGCTGAACCGGCTGA
TGGGGGAGATTTCGGGCAGCGTGGATGCGGTGGCGCGGGTGCTGAACGCGGTGGCGCGCGGCGACCTGACCGAGCGGATC
GAGGGCGAGTACCGGGGCACCTTCGGGCAGTTGCAGCACGACGCGAACGCGACGGTGCTCAGGCTGCGCGAAGTGGTGGG
CCGCATCCAGGATTCGGCGGTGGCGATCAACCGCGCGGCGCGCGAGATTGCGGCGGGCAACGGGGAGCTGTCGACGCGCA
CCGAGCAGCAGGCGAGCGCGCTCGAAGAGACGGCGAGTTCGATGGAGGAGCTGTCGGCGACGGTTCGCCAGACCGCGGAC
AACGCACGCGCGGCCAACGGGCTGGCGCTGGGCGCGCATGCGGTGGCCGGCCGTGGCGGCGAGGCGATGCGGCGGGTGGT
GAGCACGATGGGCGAGATCGAGCACTCGGCGCGCAAGATCGGCGACATCGTGGGCGTGATCGACGCGCTGGCGTTCCAGA
CCAACATCCTCGCGCTCAACGCGGCGGTGGAGGCGGCGCGGGCGGGCGAGCAGGGCCGCGGCTTTGCGGTGGTGGCGGCC
GAGGTGCGCAGCCTCGCGCAGCGCAGCGCACAGTCGGCGCGCGAGGTGAAGGCGCTGATCGGCGAATCGGTGGAGCGGGT
CGAGCACGGCGTGAAGCTGGTCGATGACGCGGGCCGCACGGTGGATGAAGTGGTGTCGGCCTTCGGTCAGGTGGCCGCGC
TGATGAGCGAGATCGCGGGCGCGAGCGGCGAGCAGAGCGCGGGCATCGGCCAGGTGACGATGTCGATCGGCCAGATGGAC
GAGATGACGCAGCACAACGCCGCGCTGGTGGAAGAGGCGGCCGCGGCGGCGATCAGCCTGGAAGAGCAGGCGCGTGAACT
GGTGGATGCGGTGGGCGTGTTCCGGGTGGGCAAGGAGGACGAACCGGCGCGCGAGCCGGCCGCGCATGGAGGGCTGCCGC
AGCCGCCGGTGCTGAGGCACAATGCCGCTCAGGGCCACGCCGGAAGCGAATCCGCAGGCGCAACGGCGCCGCTGGTCGAG
CAGGACATGCCGATGGCGCCGGCACCGCGGCCGGCCGCCCGGCGCGGCGCCCTGCCCAAGGTCCGCCGCTCGCCGGCCCC
CAAGCCCAAGCGGCCACTCGATGAAGAATGGGAGGAGTTCTAA

Upstream 100 bases:

>100_bases
TCGGCGTGTTCCGTATCGGCGAAGCGGCGCCCGCGCTGCGCGTGCTGCCGCGCGGGACTGGCGTGCGGGGTGGCGGAGCG
CGCGGCCGTGGAGGACAGCC

Downstream 100 bases:

>100_bases
GCATGCCCCCTGGGGATACGCCGCGTTCGCCGCTTTTTCCGCCGCGACCTGCCGAACCGGCGGGCGAGCGCACCCCATCC
CGCCCCGATGTGGCCGCCCT

Product: putative citrate chemoreceptor protein

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 840; Mature: 840

Protein sequence:

>840_residues
MKTADVTQREIEVLPHQSLVSKTDLDGRITYASPDFIEISGFSEQELIGAKHNVVRHPDMPAEVFEDMWRDLLAGRPWSG
IIKNRCRNGDHYWVEGNAAPIVENGRVVGFMSVRGRASREQVAAAEQNYRLFREGRAGHRRVRHGRVVSGRLGGRLVRGF
RDLPLGIKLGIALTLISLLAVVVAASGWLGIGHALDGSTVGGEGEIAFYRNAMLASVVLLLAAAAGALTLVVTTVRRPLR
EARQAFALMAEGRFHSEFDISRDDEFGRLLQQLKSMQTRLGYEMQEQQRLLAENRRIRQALDCVDTNVRIADNGGRVIYA
NRALMRTLRRLEPELRQSLPGFAADRFVGSSIGDMYADPREALQRLAGLRETGRIEMPIGRRMFIVTTNPILDEQGNKLG
TVGEWRDRTEEIAAEQALTGLVEAAAAGDFSRRLPVENKSGFFLQLAEGLNRLMGEISGSVDAVARVLNAVARGDLTERI
EGEYRGTFGQLQHDANATVLRLREVVGRIQDSAVAINRAAREIAAGNGELSTRTEQQASALEETASSMEELSATVRQTAD
NARAANGLALGAHAVAGRGGEAMRRVVSTMGEIEHSARKIGDIVGVIDALAFQTNILALNAAVEAARAGEQGRGFAVVAA
EVRSLAQRSAQSAREVKALIGESVERVEHGVKLVDDAGRTVDEVVSAFGQVAALMSEIAGASGEQSAGIGQVTMSIGQMD
EMTQHNAALVEEAAAAAISLEEQARELVDAVGVFRVGKEDEPAREPAAHGGLPQPPVLRHNAAQGHAGSESAGATAPLVE
QDMPMAPAPRPAARRGALPKVRRSPAPKPKRPLDEEWEEF

Sequences:

>Translated_840_residues
MKTADVTQREIEVLPHQSLVSKTDLDGRITYASPDFIEISGFSEQELIGAKHNVVRHPDMPAEVFEDMWRDLLAGRPWSG
IIKNRCRNGDHYWVEGNAAPIVENGRVVGFMSVRGRASREQVAAAEQNYRLFREGRAGHRRVRHGRVVSGRLGGRLVRGF
RDLPLGIKLGIALTLISLLAVVVAASGWLGIGHALDGSTVGGEGEIAFYRNAMLASVVLLLAAAAGALTLVVTTVRRPLR
EARQAFALMAEGRFHSEFDISRDDEFGRLLQQLKSMQTRLGYEMQEQQRLLAENRRIRQALDCVDTNVRIADNGGRVIYA
NRALMRTLRRLEPELRQSLPGFAADRFVGSSIGDMYADPREALQRLAGLRETGRIEMPIGRRMFIVTTNPILDEQGNKLG
TVGEWRDRTEEIAAEQALTGLVEAAAAGDFSRRLPVENKSGFFLQLAEGLNRLMGEISGSVDAVARVLNAVARGDLTERI
EGEYRGTFGQLQHDANATVLRLREVVGRIQDSAVAINRAAREIAAGNGELSTRTEQQASALEETASSMEELSATVRQTAD
NARAANGLALGAHAVAGRGGEAMRRVVSTMGEIEHSARKIGDIVGVIDALAFQTNILALNAAVEAARAGEQGRGFAVVAA
EVRSLAQRSAQSAREVKALIGESVERVEHGVKLVDDAGRTVDEVVSAFGQVAALMSEIAGASGEQSAGIGQVTMSIGQMD
EMTQHNAALVEEAAAAAISLEEQARELVDAVGVFRVGKEDEPAREPAAHGGLPQPPVLRHNAAQGHAGSESAGATAPLVE
QDMPMAPAPRPAARRGALPKVRRSPAPKPKRPLDEEWEEF
>Mature_840_residues
MKTADVTQREIEVLPHQSLVSKTDLDGRITYASPDFIEISGFSEQELIGAKHNVVRHPDMPAEVFEDMWRDLLAGRPWSG
IIKNRCRNGDHYWVEGNAAPIVENGRVVGFMSVRGRASREQVAAAEQNYRLFREGRAGHRRVRHGRVVSGRLGGRLVRGF
RDLPLGIKLGIALTLISLLAVVVAASGWLGIGHALDGSTVGGEGEIAFYRNAMLASVVLLLAAAAGALTLVVTTVRRPLR
EARQAFALMAEGRFHSEFDISRDDEFGRLLQQLKSMQTRLGYEMQEQQRLLAENRRIRQALDCVDTNVRIADNGGRVIYA
NRALMRTLRRLEPELRQSLPGFAADRFVGSSIGDMYADPREALQRLAGLRETGRIEMPIGRRMFIVTTNPILDEQGNKLG
TVGEWRDRTEEIAAEQALTGLVEAAAAGDFSRRLPVENKSGFFLQLAEGLNRLMGEISGSVDAVARVLNAVARGDLTERI
EGEYRGTFGQLQHDANATVLRLREVVGRIQDSAVAINRAAREIAAGNGELSTRTEQQASALEETASSMEELSATVRQTAD
NARAANGLALGAHAVAGRGGEAMRRVVSTMGEIEHSARKIGDIVGVIDALAFQTNILALNAAVEAARAGEQGRGFAVVAA
EVRSLAQRSAQSAREVKALIGESVERVEHGVKLVDDAGRTVDEVVSAFGQVAALMSEIAGASGEQSAGIGQVTMSIGQMD
EMTQHNAALVEEAAAAAISLEEQARELVDAVGVFRVGKEDEPAREPAAHGGLPQPPVLRHNAAQGHAGSESAGATAPLVE
QDMPMAPAPRPAARRGALPKVRRSPAPKPKRPLDEEWEEF

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=302, Percent_Identity=52.9801324503311, Blast_Score=274, Evalue=1e-74,
Organism=Escherichia coli, GI1788195, Length=312, Percent_Identity=53.525641025641, Blast_Score=268, Evalue=2e-72,
Organism=Escherichia coli, GI2367378, Length=298, Percent_Identity=56.7114093959732, Blast_Score=264, Evalue=2e-71,
Organism=Escherichia coli, GI1788194, Length=257, Percent_Identity=56.8093385214008, Blast_Score=252, Evalue=7e-68,
Organism=Escherichia coli, GI1789453, Length=256, Percent_Identity=40.234375, Blast_Score=194, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 90678; Mature: 90678

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTADVTQREIEVLPHQSLVSKTDLDGRITYASPDFIEISGFSEQELIGAKHNVVRHPDM
CCCCHHHHHHHHHCCCHHHHHHCCCCCEEEECCCCEEEECCCCHHHHHCCHHCCCCCCCC
PAEVFEDMWRDLLAGRPWSGIIKNRCRNGDHYWVEGNAAPIVENGRVVGFMSVRGRASRE
CHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCEEECCCEEEEEECCCCCHHH
QVAAAEQNYRLFREGRAGHRRVRHGRVVSGRLGGRLVRGFRDLPLGIKLGIALTLISLLA
HHHHHHHHHHHHHHCCHHHHHHHCCCEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VVVAASGWLGIGHALDGSTVGGEGEIAFYRNAMLASVVLLLAAAAGALTLVVTTVRRPLR
HHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EARQAFALMAEGRFHSEFDISRDDEFGRLLQQLKSMQTRLGYEMQEQQRLLAENRRIRQA
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LDCVDTNVRIADNGGRVIYANRALMRTLRRLEPELRQSLPGFAADRFVGSSIGDMYADPR
HHHHCCCEEEECCCCEEEEECHHHHHHHHHHCHHHHHHCCCHHHHHHHCCCHHHHCCCHH
EALQRLAGLRETGRIEMPIGRRMFIVTTNPILDEQGNKLGTVGEWRDRTEEIAAEQALTG
HHHHHHHCCHHCCCEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LVEAAAAGDFSRRLPVENKSGFFLQLAEGLNRLMGEISGSVDAVARVLNAVARGDLTERI
HHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHH
EGEYRGTFGQLQHDANATVLRLREVVGRIQDSAVAINRAAREIAAGNGELSTRTEQQASA
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LEETASSMEELSATVRQTADNARAANGLALGAHAVAGRGGEAMRRVVSTMGEIEHSARKI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
GDIVGVIDALAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSAQSAREVKALI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
GESVERVEHGVKLVDDAGRTVDEVVSAFGQVAALMSEIAGASGEQSAGIGQVTMSIGQMD
HHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
EMTQHNAALVEEAAAAAISLEEQARELVDAVGVFRVGKEDEPAREPAAHGGLPQPPVLRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCC
NAAQGHAGSESAGATAPLVEQDMPMAPAPRPAARRGALPKVRRSPAPKPKRPLDEEWEEF
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHCCCCCHHHCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MKTADVTQREIEVLPHQSLVSKTDLDGRITYASPDFIEISGFSEQELIGAKHNVVRHPDM
CCCCHHHHHHHHHCCCHHHHHHCCCCCEEEECCCCEEEECCCCHHHHHCCHHCCCCCCCC
PAEVFEDMWRDLLAGRPWSGIIKNRCRNGDHYWVEGNAAPIVENGRVVGFMSVRGRASRE
CHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCEEECCCEEEEEECCCCCHHH
QVAAAEQNYRLFREGRAGHRRVRHGRVVSGRLGGRLVRGFRDLPLGIKLGIALTLISLLA
HHHHHHHHHHHHHHCCHHHHHHHCCCEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VVVAASGWLGIGHALDGSTVGGEGEIAFYRNAMLASVVLLLAAAAGALTLVVTTVRRPLR
HHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EARQAFALMAEGRFHSEFDISRDDEFGRLLQQLKSMQTRLGYEMQEQQRLLAENRRIRQA
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LDCVDTNVRIADNGGRVIYANRALMRTLRRLEPELRQSLPGFAADRFVGSSIGDMYADPR
HHHHCCCEEEECCCCEEEEECHHHHHHHHHHCHHHHHHCCCHHHHHHHCCCHHHHCCCHH
EALQRLAGLRETGRIEMPIGRRMFIVTTNPILDEQGNKLGTVGEWRDRTEEIAAEQALTG
HHHHHHHCCHHCCCEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LVEAAAAGDFSRRLPVENKSGFFLQLAEGLNRLMGEISGSVDAVARVLNAVARGDLTERI
HHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHH
EGEYRGTFGQLQHDANATVLRLREVVGRIQDSAVAINRAAREIAAGNGELSTRTEQQASA
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LEETASSMEELSATVRQTADNARAANGLALGAHAVAGRGGEAMRRVVSTMGEIEHSARKI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
GDIVGVIDALAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSAQSAREVKALI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
GESVERVEHGVKLVDDAGRTVDEVVSAFGQVAALMSEIAGASGEQSAGIGQVTMSIGQMD
HHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
EMTQHNAALVEEAAAAAISLEEQARELVDAVGVFRVGKEDEPAREPAAHGGLPQPPVLRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCC
NAAQGHAGSESAGATAPLVEQDMPMAPAPRPAARRGALPKVRRSPAPKPKRPLDEEWEEF
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHCCCCCHHHCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]