| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is nadE [H]
Identifier: 119897651
GI number: 119897651
Start: 1480139
End: 1481755
Strand: Direct
Name: nadE [H]
Synonym: azo1360
Alternate gene names: 119897651
Gene position: 1480139-1481755 (Clockwise)
Preceding gene: 119897649
Following gene: 119897652
Centisome position: 33.82
GC content: 65.37
Gene sequence:
>1617_bases ATGAATACCGCGCTTTCCATTGCCGTCGCCCAGTTGAACTTCACCGTGGGCGATCTCGTCGGCAACGCCGACCGCATCAT CGAAGCCATTTCCGCCGCGCGCGAGCGCGGCGCCGGCCTGCTGATTACCCCTGAACTCGCGCTGTCCGGCTATCCCCCCG AGGATCTGCTGCTACGCCCGGATTTCTATCGCGGCTGCGCGCGTGAGGTGCGCCGCATTGCCGGGCATTGTCGCGACTTC TGCCTGGTGCTCGGCCATCCCACCGAGCGCGGCGGGGTGTATTACAACGCCGCGTCCGTGATCCGGGATGGCGAGGTGAT CGCGACCTACCACAAGCACCTGCTGCCCAATTACGAGGTCTTCGACGAGGAGCGCTATTTCGAATCCGGTGTCGCCCCCT GCGTTTTCGAGCATGGCGGGGTGCGGATCGGCGTGAACATCTGTGCCGACGTGTGGGAGTCAGGTCCCGCGGAGGTCGCG CGAGCGGCGGGGGCCGAAGTGCTGGTGTCGCTCAACGCGTCTCCCTTCCATATCGACAAGCAGCAATTGCGCTACGCGGT GCTGCGCGATCGGGTGCGGGAAACCCGGTTGCCGGTGCTTTACTGCAACATGGTCGGCGGCCAGGACGAACTCGTTTTCG ACGGCGCCTCCTTCGCCCTCGACCGTGACGGTACGGTGGCCTACCAGTCCGAGGCGTTTGCAGCGTGCATCGACGTGCTG CGTTTCGAGCAGGGGCGCTGGAGCGGCGGGGGGCACGCGGCGCCCAAGGGTACCGAGGCCGATATCTACGCCGCGCTCGT CTGCGGGGTGCGCGATTACCTCGGCAAGAACGGCTTTCCCGGCGCGATCATCGGCCTGTCCGGCGGAATCGACTCGGCGC TCACGCTGGCGGTGGCCGTGGATGCGCTGGGTGCGGACCGCGTGCACGCGGTGATGATGCCGTCGCCCTATACGGCCCAG ATGAGCCTTGATGATTCCCGCGAGATGGTGAAGCGCCTGGGCGTGCGCTACGACGAGATCGCGATCGAGCCGGCGATGAA TGTGTTCGCTGACCTGCTCGCGCCGCAGTTCGCCGGCCTCGCGGCCGACACTACCGAAGAGAATCTCCAGAGCCGCATCC GCGGCATGATCCTGATGGCGCTGTCCAACAAGACCGGGGCGATCGTGCTCACCACCGGCAACAAGAGCGAGATGGCCACC GGTTACGCCACGCTGTACGGCGACATGGCGGGCGGCTTTGCGGTGCTGAAGGACCTCTACAAGACCACGGTCTATCGCCT CGCGGCCTGGCGCAACAGCGTGGGCGAGGTCATTCCGCAGAACATCATCGACCGGCCGCCTTCGGCCGAACTGAAGCCGG ACCAGAAGGATCAGGACAGCCTTCCGCCTTACGAAGTGCTCGACGCGATCATCCAGGCCTACATGGAACACGATGAGTCG CCGCGCGAGATCATCGCCCGCGGTCTGCCGGAGGCCGACGTGCGGCGCACGGTGACCATGCTCAAGCGCAACGAATACAA GCGGCGCCAGGCGCCGGTGGGTATCCGGGTGACACAGCGCGGCTTCGGCAGGGACTGGCGTTATCCGATAACATCACGCT ATCAAGACGAATTCTGA
Upstream 100 bases:
>100_bases TCCGCTTGGGCGGCTCGTCGTGGAAATGCCGCCCGGCCCGCTGGCCGTGGTGCGACCGTGCCCCCTGACCGGGCGCTGCC GAAACGATATAGTTGAGGTC
Downstream 100 bases:
>100_bases ACGACGACACTGCGCCCGACGGGGCGGTGCAAGCCCACCGGAGACTCCCATGAAGAAGATCGAAGCCATCATCAAGCCGT TCAAGCTGGACGAAGTACGT
Product: NAD synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolysing] [H]
Number of amino acids: Translated: 538; Mature: 538
Protein sequence:
>538_residues MNTALSIAVAQLNFTVGDLVGNADRIIEAISAARERGAGLLITPELALSGYPPEDLLLRPDFYRGCAREVRRIAGHCRDF CLVLGHPTERGGVYYNAASVIRDGEVIATYHKHLLPNYEVFDEERYFESGVAPCVFEHGGVRIGVNICADVWESGPAEVA RAAGAEVLVSLNASPFHIDKQQLRYAVLRDRVRETRLPVLYCNMVGGQDELVFDGASFALDRDGTVAYQSEAFAACIDVL RFEQGRWSGGGHAAPKGTEADIYAALVCGVRDYLGKNGFPGAIIGLSGGIDSALTLAVAVDALGADRVHAVMMPSPYTAQ MSLDDSREMVKRLGVRYDEIAIEPAMNVFADLLAPQFAGLAADTTEENLQSRIRGMILMALSNKTGAIVLTTGNKSEMAT GYATLYGDMAGGFAVLKDLYKTTVYRLAAWRNSVGEVIPQNIIDRPPSAELKPDQKDQDSLPPYEVLDAIIQAYMEHDES PREIIARGLPEADVRRTVTMLKRNEYKRRQAPVGIRVTQRGFGRDWRYPITSRYQDEF
Sequences:
>Translated_538_residues MNTALSIAVAQLNFTVGDLVGNADRIIEAISAARERGAGLLITPELALSGYPPEDLLLRPDFYRGCAREVRRIAGHCRDF CLVLGHPTERGGVYYNAASVIRDGEVIATYHKHLLPNYEVFDEERYFESGVAPCVFEHGGVRIGVNICADVWESGPAEVA RAAGAEVLVSLNASPFHIDKQQLRYAVLRDRVRETRLPVLYCNMVGGQDELVFDGASFALDRDGTVAYQSEAFAACIDVL RFEQGRWSGGGHAAPKGTEADIYAALVCGVRDYLGKNGFPGAIIGLSGGIDSALTLAVAVDALGADRVHAVMMPSPYTAQ MSLDDSREMVKRLGVRYDEIAIEPAMNVFADLLAPQFAGLAADTTEENLQSRIRGMILMALSNKTGAIVLTTGNKSEMAT GYATLYGDMAGGFAVLKDLYKTTVYRLAAWRNSVGEVIPQNIIDRPPSAELKPDQKDQDSLPPYEVLDAIIQAYMEHDES PREIIARGLPEADVRRTVTMLKRNEYKRRQAPVGIRVTQRGFGRDWRYPITSRYQDEF >Mature_538_residues MNTALSIAVAQLNFTVGDLVGNADRIIEAISAARERGAGLLITPELALSGYPPEDLLLRPDFYRGCAREVRRIAGHCRDF CLVLGHPTERGGVYYNAASVIRDGEVIATYHKHLLPNYEVFDEERYFESGVAPCVFEHGGVRIGVNICADVWESGPAEVA RAAGAEVLVSLNASPFHIDKQQLRYAVLRDRVRETRLPVLYCNMVGGQDELVFDGASFALDRDGTVAYQSEAFAACIDVL RFEQGRWSGGGHAAPKGTEADIYAALVCGVRDYLGKNGFPGAIIGLSGGIDSALTLAVAVDALGADRVHAVMMPSPYTAQ MSLDDSREMVKRLGVRYDEIAIEPAMNVFADLLAPQFAGLAADTTEENLQSRIRGMILMALSNKTGAIVLTTGNKSEMAT GYATLYGDMAGGFAVLKDLYKTTVYRLAAWRNSVGEVIPQNIIDRPPSAELKPDQKDQDSLPPYEVLDAIIQAYMEHDES PREIIARGLPEADVRRTVTMLKRNEYKRRQAPVGIRVTQRGFGRDWRYPITSRYQDEF
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6321865, Length=699, Percent_Identity=20.4577968526466, Blast_Score=86, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR000132 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 58993; Mature: 58993
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTALSIAVAQLNFTVGDLVGNADRIIEAISAARERGAGLLITPELALSGYPPEDLLLRP CCCCCEEEEEEECCHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCHHCCCCCCHHCEECC DFYRGCAREVRRIAGHCRDFCLVLGHPTERGGVYYNAASVIRDGEVIATYHKHLLPNYEV HHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEHHHHHCCCCCHHHHHHHHCCCCHH FDEERYFESGVAPCVFEHGGVRIGVNICADVWESGPAEVARAAGAEVLVSLNASPFHIDK CCHHHHHHCCCCCEEEECCCEEEEHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCCH QQLRYAVLRDRVRETRLPVLYCNMVGGQDELVFDGASFALDRDGTVAYQSEAFAACIDVL HHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCEEECCCCCEEECHHHHHHHHHHH RFEQGRWSGGGHAAPKGTEADIYAALVCGVRDYLGKNGFPGAIIGLSGGIDSALTLAVAV HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHH DALGADRVHAVMMPSPYTAQMSLDDSREMVKRLGVRYDEIAIEPAMNVFADLLAPQFAGL HHCCCCCEEEEECCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC AADTTEENLQSRIRGMILMALSNKTGAIVLTTGNKSEMATGYATLYGDMAGGFAVLKDLY CCCCHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHH KTTVYRLAAWRNSVGEVIPQNIIDRPPSAELKPDQKDQDSLPPYEVLDAIIQAYMEHDES HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC PREIIARGLPEADVRRTVTMLKRNEYKRRQAPVGIRVTQRGFGRDWRYPITSRYQDEF HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNTALSIAVAQLNFTVGDLVGNADRIIEAISAARERGAGLLITPELALSGYPPEDLLLRP CCCCCEEEEEEECCHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCHHCCCCCCHHCEECC DFYRGCAREVRRIAGHCRDFCLVLGHPTERGGVYYNAASVIRDGEVIATYHKHLLPNYEV HHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEHHHHHCCCCCHHHHHHHHCCCCHH FDEERYFESGVAPCVFEHGGVRIGVNICADVWESGPAEVARAAGAEVLVSLNASPFHIDK CCHHHHHHCCCCCEEEECCCEEEEHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCCH QQLRYAVLRDRVRETRLPVLYCNMVGGQDELVFDGASFALDRDGTVAYQSEAFAACIDVL HHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCEEECCCCCEEECHHHHHHHHHHH RFEQGRWSGGGHAAPKGTEADIYAALVCGVRDYLGKNGFPGAIIGLSGGIDSALTLAVAV HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHH DALGADRVHAVMMPSPYTAQMSLDDSREMVKRLGVRYDEIAIEPAMNVFADLLAPQFAGL HHCCCCCEEEEECCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC AADTTEENLQSRIRGMILMALSNKTGAIVLTTGNKSEMATGYATLYGDMAGGFAVLKDLY CCCCHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHH KTTVYRLAAWRNSVGEVIPQNIIDRPPSAELKPDQKDQDSLPPYEVLDAIIQAYMEHDES HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC PREIIARGLPEADVRRTVTMLKRNEYKRRQAPVGIRVTQRGFGRDWRYPITSRYQDEF HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]