| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is phbC2 [H]
Identifier: 119897641
GI number: 119897641
Start: 1467151
End: 1468884
Strand: Direct
Name: phbC2 [H]
Synonym: azo1350
Alternate gene names: 119897641
Gene position: 1467151-1468884 (Clockwise)
Preceding gene: 119897639
Following gene: 119897643
Centisome position: 33.53
GC content: 61.53
Gene sequence:
>1734_bases ATGAACAAGAGCGAGCGACTCGACCCAGGTCAAACCGTAAAGCGTTCGATCAAGCAACTGCACGAAGCGGTCGAGGGGGC CTTCGATCCGCTCGGGATGGCGGCGCCTATCATTCACGCCCAGCTGGCTTGGGCTGCGCATCCGCAGGAGCTGGCAGATC GTCTTCTGCGTCTTTCCTCCGACCTGTGGCGTCTGCAATGGCATTCCTGGAACCGGGTTCTCGGCCTCGACAGCGAAGAT CCGGTGCGGCCGAATCCGGACGATGCGCGTTTTGCCGATCCGGTCTGGACTGAGTCGCCGACCTGGGATCTCACCAAAGA GTGGTATCTGGCGCTGACCCACCATGTCCAGGACATGCTCTATGACACGCCGGGTCTGACGGGGAAGGAGCGGCGGCGGG CGGCGTTCTGGTGGCGGAAATGGCTGAATGCGGTCGCGCCGACCAATTTCTTCTGGACGAATCCGGTCGCAGTGCGAAAG GCGTGGGAAACGAAGGGTGAGAGCCTGGTCCGCGGGTTCGGCAATTTCCTCGACGACGTTCGCGCGGGTGAAGTGCGGAT GACTCGTCCCGATGACTTCGAGGTGGGCAAGAACCTGGCGACGACGCCCGGCGCGGTCGTGTTCAGGAACGACCTCTTGG AGGTGATTCATTACCAACCCACTCGTCCGCAAGTGCACCGCGATCCGGTCGTCATCGTCACGCCGTGGATCAACAAGTTC TACATCCTCGATCTCGTTCCGAAGAAGAGCCTGATTCGTTACCTGCTCGACCAGGGACTGGACGTATTCATTACAAGCTG GAAGAACCCTGACGCCTCGATGCGGGATGTGACGTTCGACGACTACGTCACACGCGGTGTGCACGCCGCGGTAGAGACGG CGCGAGGGCTTGCGGGCGCGGAGAAGGTGCATGCGGTGGGATACTGCATCGGTGGCACGGCGCTCAGCATGTACATGGCG TGGGCCAATCGCCACTTTCCGGCCGAGGCGGTTCCGGTGGCAGACTGGACCGTCTTTACCACGCTCGTCGATTTTCAGAA GCCGGGCGACATCGAGGTGTTCATCGACGAGTCGAGCATCCGCTACCTGACCGGAAACATGGCCCGAACCGGTTATCTGG AAGGCAAGGAGATGGCATCCGCTTTCCGCCTGCTGCGTTCGAACAGTCTCATATGGCACTACGTAGTCCACGGCTGGCTG TACGGCGAAACACCGGCCTCGTTCGACGTGCTGTACTGGAACATGGACGCGACGCGGATGCCCTATGCGATGCACTCCTG GTATCTCAGGGAGCTGTATCTGCACAACAGGTTGATTCAGAAGGACGCGCTGGTGGTGGCAGGCGAACCGCTCGACCTCG CTGCGATCTCGCAGCCGCTGTACGCCGTCGCGGCGGAGGATGATCACATCGCTCCGTGGGGACAGACCTTCCGCATCAAT AATTTTGTAACCGGCCCCAAGCGCTACGTGCTATCGAGTTCGGGACACATCCTCGGCATCGTCAACCCGGTCGTTCAGCC GCCCAAGCGAAACTATCGCGCAGCCGAAGCGCATCGCTCGGAATCGGCTGAGGCATGGTTGGACCGGGCCGAACGCCACG AGGGGAGTTGGTGGGAGGACTGGATGCAGTGGTTGAAGCCGCGGGCGGGCGAACTGGTCGACGCGCGACCGGTCGCCAAT GCTGCCTTTCCGGCTTTGGCGCCGGCGCCAGGAACCTACGTGCTGGAAAAATAG
Upstream 100 bases:
>100_bases GGGAACCTCCGCGTACCGTGGGAGTCATCACCGACGATGTTGGTTGGGCTGCCGTGGCAAAATGGAAAAGCCCCCTGTCA TTTCGAAGCTTGGAGACGTG
Downstream 100 bases:
>100_bases CGGTGAAGTGGGGCGGGAGGAACTAGCGACACGCAGGTTGGTGTTGTATCAGCTTCTTCAGGCCCCCGCTGTCGAGAATC CGGATGTGCTTCTGCTGCAC
Product: poly-beta-hydroxybutyrate synthase
Products: NA
Alternate protein names: PHA synthase; PHB synthase; Poly(3-hydroxyalkanoate) polymerase; PHA polymerase; Poly(3-hydroxybutyrate) polymerase; PHB polymerase; Polyhydroxyalkanoic acid synthase [H]
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MNKSERLDPGQTVKRSIKQLHEAVEGAFDPLGMAAPIIHAQLAWAAHPQELADRLLRLSSDLWRLQWHSWNRVLGLDSED PVRPNPDDARFADPVWTESPTWDLTKEWYLALTHHVQDMLYDTPGLTGKERRRAAFWWRKWLNAVAPTNFFWTNPVAVRK AWETKGESLVRGFGNFLDDVRAGEVRMTRPDDFEVGKNLATTPGAVVFRNDLLEVIHYQPTRPQVHRDPVVIVTPWINKF YILDLVPKKSLIRYLLDQGLDVFITSWKNPDASMRDVTFDDYVTRGVHAAVETARGLAGAEKVHAVGYCIGGTALSMYMA WANRHFPAEAVPVADWTVFTTLVDFQKPGDIEVFIDESSIRYLTGNMARTGYLEGKEMASAFRLLRSNSLIWHYVVHGWL YGETPASFDVLYWNMDATRMPYAMHSWYLRELYLHNRLIQKDALVVAGEPLDLAAISQPLYAVAAEDDHIAPWGQTFRIN NFVTGPKRYVLSSSGHILGIVNPVVQPPKRNYRAAEAHRSESAEAWLDRAERHEGSWWEDWMQWLKPRAGELVDARPVAN AAFPALAPAPGTYVLEK
Sequences:
>Translated_577_residues MNKSERLDPGQTVKRSIKQLHEAVEGAFDPLGMAAPIIHAQLAWAAHPQELADRLLRLSSDLWRLQWHSWNRVLGLDSED PVRPNPDDARFADPVWTESPTWDLTKEWYLALTHHVQDMLYDTPGLTGKERRRAAFWWRKWLNAVAPTNFFWTNPVAVRK AWETKGESLVRGFGNFLDDVRAGEVRMTRPDDFEVGKNLATTPGAVVFRNDLLEVIHYQPTRPQVHRDPVVIVTPWINKF YILDLVPKKSLIRYLLDQGLDVFITSWKNPDASMRDVTFDDYVTRGVHAAVETARGLAGAEKVHAVGYCIGGTALSMYMA WANRHFPAEAVPVADWTVFTTLVDFQKPGDIEVFIDESSIRYLTGNMARTGYLEGKEMASAFRLLRSNSLIWHYVVHGWL YGETPASFDVLYWNMDATRMPYAMHSWYLRELYLHNRLIQKDALVVAGEPLDLAAISQPLYAVAAEDDHIAPWGQTFRIN NFVTGPKRYVLSSSGHILGIVNPVVQPPKRNYRAAEAHRSESAEAWLDRAERHEGSWWEDWMQWLKPRAGELVDARPVAN AAFPALAPAPGTYVLEK >Mature_577_residues MNKSERLDPGQTVKRSIKQLHEAVEGAFDPLGMAAPIIHAQLAWAAHPQELADRLLRLSSDLWRLQWHSWNRVLGLDSED PVRPNPDDARFADPVWTESPTWDLTKEWYLALTHHVQDMLYDTPGLTGKERRRAAFWWRKWLNAVAPTNFFWTNPVAVRK AWETKGESLVRGFGNFLDDVRAGEVRMTRPDDFEVGKNLATTPGAVVFRNDLLEVIHYQPTRPQVHRDPVVIVTPWINKF YILDLVPKKSLIRYLLDQGLDVFITSWKNPDASMRDVTFDDYVTRGVHAAVETARGLAGAEKVHAVGYCIGGTALSMYMA WANRHFPAEAVPVADWTVFTTLVDFQKPGDIEVFIDESSIRYLTGNMARTGYLEGKEMASAFRLLRSNSLIWHYVVHGWL YGETPASFDVLYWNMDATRMPYAMHSWYLRELYLHNRLIQKDALVVAGEPLDLAAISQPLYAVAAEDDHIAPWGQTFRIN NFVTGPKRYVLSSSGHILGIVNPVVQPPKRNYRAAEAHRSESAEAWLDRAERHEGSWWEDWMQWLKPRAGELVDARPVAN AAFPALAPAPGTYVLEK
Specific function: Polymerizes d(-)-3-hydroxybutyryl-CoA to create PHB which consists of thousands of hydroxybutyrate molecules linked end to end. PHB serves as an intracellular energy reserve material when cells grow under conditions of nutrient limitation [H]
COG id: COG3243
COG function: function code I; Poly(3-hydroxyalkanoate) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PHA/PHB synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR010963 - InterPro: IPR010941 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF07167 PhaC_N [H]
EC number: NA
Molecular weight: Translated: 65760; Mature: 65760
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSERLDPGQTVKRSIKQLHEAVEGAFDPLGMAAPIIHAQLAWAAHPQELADRLLRLSS CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH DLWRLQWHSWNRVLGLDSEDPVRPNPDDARFADPVWTESPTWDLTKEWYLALTHHVQDML HHHEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH YDTPGLTGKERRRAAFWWRKWLNAVAPTNFFWTNPVAVRKAWETKGESLVRGFGNFLDDV HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCHHHHHHHHHHHHHHH RAGEVRMTRPDDFEVGKNLATTPGAVVFRNDLLEVIHYQPTRPQVHRDPVVIVTPWINKF CCCCEEECCCCCHHHCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEE YILDLVPKKSLIRYLLDQGLDVFITSWKNPDASMRDVTFDDYVTRGVHAAVETARGLAGA EEEEECCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCH EKVHAVGYCIGGTALSMYMAWANRHFPAEAVPVADWTVFTTLVDFQKPGDIEVFIDESSI HHHHHEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCE RYLTGNMARTGYLEGKEMASAFRLLRSNSLIWHYVVHGWLYGETPASFDVLYWNMDATRM EEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEHHEEECCCCCCEEEEEEECCCCCC PYAMHSWYLRELYLHNRLIQKDALVVAGEPLDLAAISQPLYAVAAEDDHIAPWGQTFRIN CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCEEEEECCCCCCCCCCCEEEEC NFVTGPKRYVLSSSGHILGIVNPVVQPPKRNYRAAEAHRSESAEAWLDRAERHEGSWWED CCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCHHH WMQWLKPRAGELVDARPVANAAFPALAPAPGTYVLEK HHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCEEECC >Mature Secondary Structure MNKSERLDPGQTVKRSIKQLHEAVEGAFDPLGMAAPIIHAQLAWAAHPQELADRLLRLSS CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH DLWRLQWHSWNRVLGLDSEDPVRPNPDDARFADPVWTESPTWDLTKEWYLALTHHVQDML HHHEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH YDTPGLTGKERRRAAFWWRKWLNAVAPTNFFWTNPVAVRKAWETKGESLVRGFGNFLDDV HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCHHHHHHHHHHHHHHH RAGEVRMTRPDDFEVGKNLATTPGAVVFRNDLLEVIHYQPTRPQVHRDPVVIVTPWINKF CCCCEEECCCCCHHHCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEE YILDLVPKKSLIRYLLDQGLDVFITSWKNPDASMRDVTFDDYVTRGVHAAVETARGLAGA EEEEECCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCH EKVHAVGYCIGGTALSMYMAWANRHFPAEAVPVADWTVFTTLVDFQKPGDIEVFIDESSI HHHHHEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCE RYLTGNMARTGYLEGKEMASAFRLLRSNSLIWHYVVHGWLYGETPASFDVLYWNMDATRM EEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEHHEEECCCCCCEEEEEEECCCCCC PYAMHSWYLRELYLHNRLIQKDALVVAGEPLDLAAISQPLYAVAAEDDHIAPWGQTFRIN CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCEEEEECCCCCCCCCCCEEEEC NFVTGPKRYVLSSSGHILGIVNPVVQPPKRNYRAAEAHRSESAEAWLDRAERHEGSWWED CCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCHHH WMQWLKPRAGELVDARPVANAAFPALAPAPGTYVLEK HHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748438 [H]