Click here to switch to the map view.

The map label for this gene is ccoN [H]

Identifier: 119897632

GI number: 119897632

Start: 1460596

End: 1462020

Strand: Direct

Name: ccoN [H]

Synonym: azo1341

Alternate gene names: 119897632

Gene position: 1460596-1462020 (Clockwise)

Preceding gene: 119897631

Following gene: 119897633

Centisome position: 33.38

GC content: 60.14

Gene sequence:

>1425_bases
ATGCAATCGCAAGCGACTTATAACTACAAAGTCGTGCGCCAGTTCGCCATCATGACGGTGGTGTGGGGCATTGTGGGCAT
GCTAGTCGGCGTCATTGCCGCGGCACAGCTCGTATGGCCCGAACTGAACGTTCACGAGTGGCTTGGCTACGGCCGGCTTC
GTCCGCTCCACACCAATGCGGTCATCTTCGCATTCGGTGGGTGCGCGCTGTTCGCAACGTCCTATTACGTCGTGCAGCGC
ACCTGTCACACCCGTCTGTTCGCGCCGGGTCTGGCGGCCTTCACCTTCTGGGGCTGGCAACTGGTCATCGTGCTGGCTGC
GATCACGCTTCCGCTCGGTTTCACCTCCGGTAAGGAGTATGCGGAGCTGGAGTGGCCGATCGACCTGCTGATTGCGGTTG
TGTGGGTTTCCTACGCGGTGGTGTTCTTCGGTACCGTTGCCAAGCGTACCGTCGCTCACATCTATGTCGCCAACTGGTTC
TACGGTGCTTTCATCATCACCGTCGCCCTGCTGCACATTGTTAACAGCATGGCAATTCCGGTCAGCCTTACCAAGTCCTA
CTCGGCGTACGCCGGTGTCCAGGACGCCATGGTTCAGTGGTGGTACGGCCACAACGCTGTCGGCTTCTTCCTGACGGCGG
GCTTCCTCGGCATGATGTATTACTTCGTGCCGAAACAAGCCGATCGTCCGGTCTACTCGTACCGCCTGTCCGTGGTGCAC
TTCTGGGCGCTGATCTTCACCTACATGTGGGCAGGTCCTCACCACCTGCACTACACGGCCCTGCCGGACTGGACCCAGTC
CGTCGGCATGATCTTCTCGCTGATCCTGCTGGCTCCGTCGTGGGGTGGCATGATCAACGGCATCATGACCCTGTCGGGCG
CCTGGCATAAGCTTCGTACCGACCCGATCCTGAAGTTCCTGATCACCGCGCTCTCGTTCTACGGCATGTCGACCTTCGAA
GGCCCGATGATGTCGGTGAAGACCGTCAATGCGCTCTCCCACTACACCGACTGGACTGTGGGTCACGTGCACTCCGGCGC
GCTGGGCTGGGTTGCGATGATCTCGATCGGCTCCGTGTATTTCCTGCTGCCGCGCCTGTACGGCAAGACCGAGATGTACA
GCGTGAAGTTGATCAACGCCCACTTCTGGATCGCGACCATCGGCGTCGTGCTCTACATCGCCTCGATGTGGATCGCCGGC
GTGATGCAAGGTCTGATGTGGCGTGCGACCAACCCGGACGGCACCCTGACCTACTCGTTCGTGGAAGGCGTCAAGGCGAG
CTATCCGTTCTGGTCGATCCGCCTTCTGGGTGGCGTTCTGTTCCTGACCGGCATGCTGATCATGTTCTACAACATGGTGA
AGACCATCGCGGGCGAAAAGGCTTACAACGCCCCGGTCATCGCGCCTGCCGCCGCTCACGCCTAA

Upstream 100 bases:

>100_bases
TCGACCCGAGGGTATCCTTCCGACGGTTGAAGGATCATCGCCAGCCTGGGTCCGGCTGGTCGGTAGGCTTTACAAGGGGT
TTTTAACTAAGAGGTGACTC

Downstream 100 bases:

>100_bases
GGGAGTATTTCGAGAATGGCTCAATCCAAACACGCAGCAATCGAGCGGAGCGTATTCCTGATGATCGTGCTGACCCTCCT
GACCGTGAGCGTCGGGGGGT

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MQSQATYNYKVVRQFAIMTVVWGIVGMLVGVIAAAQLVWPELNVHEWLGYGRLRPLHTNAVIFAFGGCALFATSYYVVQR
TCHTRLFAPGLAAFTFWGWQLVIVLAAITLPLGFTSGKEYAELEWPIDLLIAVVWVSYAVVFFGTVAKRTVAHIYVANWF
YGAFIITVALLHIVNSMAIPVSLTKSYSAYAGVQDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQADRPVYSYRLSVVH
FWALIFTYMWAGPHHLHYTALPDWTQSVGMIFSLILLAPSWGGMINGIMTLSGAWHKLRTDPILKFLITALSFYGMSTFE
GPMMSVKTVNALSHYTDWTVGHVHSGALGWVAMISIGSVYFLLPRLYGKTEMYSVKLINAHFWIATIGVVLYIASMWIAG
VMQGLMWRATNPDGTLTYSFVEGVKASYPFWSIRLLGGVLFLTGMLIMFYNMVKTIAGEKAYNAPVIAPAAAHA

Sequences:

>Translated_474_residues
MQSQATYNYKVVRQFAIMTVVWGIVGMLVGVIAAAQLVWPELNVHEWLGYGRLRPLHTNAVIFAFGGCALFATSYYVVQR
TCHTRLFAPGLAAFTFWGWQLVIVLAAITLPLGFTSGKEYAELEWPIDLLIAVVWVSYAVVFFGTVAKRTVAHIYVANWF
YGAFIITVALLHIVNSMAIPVSLTKSYSAYAGVQDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQADRPVYSYRLSVVH
FWALIFTYMWAGPHHLHYTALPDWTQSVGMIFSLILLAPSWGGMINGIMTLSGAWHKLRTDPILKFLITALSFYGMSTFE
GPMMSVKTVNALSHYTDWTVGHVHSGALGWVAMISIGSVYFLLPRLYGKTEMYSVKLINAHFWIATIGVVLYIASMWIAG
VMQGLMWRATNPDGTLTYSFVEGVKASYPFWSIRLLGGVLFLTGMLIMFYNMVKTIAGEKAYNAPVIAPAAAHA
>Mature_474_residues
MQSQATYNYKVVRQFAIMTVVWGIVGMLVGVIAAAQLVWPELNVHEWLGYGRLRPLHTNAVIFAFGGCALFATSYYVVQR
TCHTRLFAPGLAAFTFWGWQLVIVLAAITLPLGFTSGKEYAELEWPIDLLIAVVWVSYAVVFFGTVAKRTVAHIYVANWF
YGAFIITVALLHIVNSMAIPVSLTKSYSAYAGVQDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQADRPVYSYRLSVVH
FWALIFTYMWAGPHHLHYTALPDWTQSVGMIFSLILLAPSWGGMINGIMTLSGAWHKLRTDPILKFLITALSFYGMSTFE
GPMMSVKTVNALSHYTDWTVGHVHSGALGWVAMISIGSVYFLLPRLYGKTEMYSVKLINAHFWIATIGVVLYIASMWIAG
VMQGLMWRATNPDGTLTYSFVEGVKASYPFWSIRLLGGVLFLTGMLIMFYNMVKTIAGEKAYNAPVIAPAAAHA

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 52902; Mature: 52902

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSQATYNYKVVRQFAIMTVVWGIVGMLVGVIAAAQLVWPELNVHEWLGYGRLRPLHTNA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEECCE
VIFAFGGCALFATSYYVVQRTCHTRLFAPGLAAFTFWGWQLVIVLAAITLPLGFTSGKEY
EEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AELEWPIDLLIAVVWVSYAVVFFGTVAKRTVAHIYVANWFYGAFIITVALLHIVNSMAIP
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VSLTKSYSAYAGVQDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQADRPVYSYRLSVVH
EEECCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
FWALIFTYMWAGPHHLHYTALPDWTQSVGMIFSLILLAPSWGGMINGIMTLSGAWHKLRT
HHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCC
DPILKFLITALSFYGMSTFEGPMMSVKTVNALSHYTDWTVGHVHSGALGWVAMISIGSVY
CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHH
FLLPRLYGKTEMYSVKLINAHFWIATIGVVLYIASMWIAGVMQGLMWRATNPDGTLTYSF
HHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEHH
VEGVKASYPFWSIRLLGGVLFLTGMLIMFYNMVKTIAGEKAYNAPVIAPAAAHA
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCC
>Mature Secondary Structure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HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]