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The map label for this gene is vdlD [H]

Identifier: 119897558

GI number: 119897558

Start: 1365220

End: 1365705

Strand: Direct

Name: vdlD [H]

Synonym: azo1267

Alternate gene names: 119897558

Gene position: 1365220-1365705 (Clockwise)

Preceding gene: 119897555

Following gene: 119897559

Centisome position: 31.2

GC content: 63.58

Gene sequence:

>486_bases
ATGCAGTTGCCCAATCACCAACTCGCCATGACCGTGCTGATGACGCCGGACATGGCCAATTTTTCCGGCAAGGTCCACGG
CGGCGCCATCCTGAAGCTGCTCGACCAGGTGGCCTACGCCTGCGCCAGCCGTTACGCCGGCGAATACGTCGTCACGCTGT
CGGTCGATCAGGTGATGTTCCGCGAGCCGATCAATGTCGGCGAACTCGTCACCTTCCTCGCGTCAGTGAACTACACCGGC
AAGACCTCGATGGAAATCGGCATCAAGGTGCTGGCCGAGAACATCCGCGGCAAGCGTGTGCGCCACGCCAACAGCTGCTT
CTTCACGATGGTGGCGGTGGACGAGAACGGCCGTGCTACGACGGTTCCGCAGCTGCAGCCTTCCACTCCGGACGAGGAGC
GCCGCTACCAGGCTGCAAAGCTGCGGCGCGAACTGCGCCAGGAGTTCGAGGCGCGCCAGCAGGCGCTGAAGCCGGCAAGC
GCATGA

Upstream 100 bases:

>100_bases
GGGCTTTGCGCGCTGTTCCGTGCTGGCTTACCCTTGCGGCGCCCGCCTCTTCATTGCCTGCACGCGGGCGGCCGGTGCGG
CCCAGGCTTGCGGAGTCTCC

Downstream 100 bases:

>100_bases
GCGGCACGACCGACGCCGGCGCTCAGGCGGCCAGCCGCGACCCGCTGCACGGCGTTACGCTGGAGCGGCTGCTGAACGAA
CTGGTGGCGCACTACGGCTG

Product: acyl-CoA thioester hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MQLPNHQLAMTVLMTPDMANFSGKVHGGAILKLLDQVAYACASRYAGEYVVTLSVDQVMFREPINVGELVTFLASVNYTG
KTSMEIGIKVLAENIRGKRVRHANSCFFTMVAVDENGRATTVPQLQPSTPDEERRYQAAKLRRELRQEFEARQQALKPAS
A

Sequences:

>Translated_161_residues
MQLPNHQLAMTVLMTPDMANFSGKVHGGAILKLLDQVAYACASRYAGEYVVTLSVDQVMFREPINVGELVTFLASVNYTG
KTSMEIGIKVLAENIRGKRVRHANSCFFTMVAVDENGRATTVPQLQPSTPDEERRYQAAKLRRELRQEFEARQQALKPAS
A
>Mature_161_residues
MQLPNHQLAMTVLMTPDMANFSGKVHGGAILKLLDQVAYACASRYAGEYVVTLSVDQVMFREPINVGELVTFLASVNYTG
KTSMEIGIKVLAENIRGKRVRHANSCFFTMVAVDENGRATTVPQLQPSTPDEERRYQAAKLRRELRQEFEARQQALKPAS
A

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI32528286, Length=139, Percent_Identity=38.1294964028777, Blast_Score=94, Evalue=7e-20,
Organism=Homo sapiens, GI32528284, Length=139, Percent_Identity=38.1294964028777, Blast_Score=93, Evalue=8e-20,
Organism=Homo sapiens, GI75709208, Length=139, Percent_Identity=38.1294964028777, Blast_Score=93, Evalue=8e-20,
Organism=Homo sapiens, GI32528282, Length=139, Percent_Identity=38.1294964028777, Blast_Score=93, Evalue=1e-19,
Organism=Homo sapiens, GI18640736, Length=137, Percent_Identity=36.4963503649635, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI22165400, Length=135, Percent_Identity=34.0740740740741, Blast_Score=80, Evalue=9e-16,
Organism=Homo sapiens, GI22165355, Length=135, Percent_Identity=34.0740740740741, Blast_Score=80, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 17918; Mature: 17918

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPNHQLAMTVLMTPDMANFSGKVHGGAILKLLDQVAYACASRYAGEYVVTLSVDQVMF
CCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHH
REPINVGELVTFLASVNYTGKTSMEIGIKVLAENIRGKRVRHANSCFFTMVAVDENGRAT
HCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCEEEEEEEECCCCCEE
TVPQLQPSTPDEERRYQAAKLRRELRQEFEARQQALKPASA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQLPNHQLAMTVLMTPDMANFSGKVHGGAILKLLDQVAYACASRYAGEYVVTLSVDQVMF
CCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHH
REPINVGELVTFLASVNYTGKTSMEIGIKVLAENIRGKRVRHANSCFFTMVAVDENGRAT
HCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCEEEEEEEECCCCCEE
TVPQLQPSTPDEERRYQAAKLRRELRQEFEARQQALKPASA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]