Click here to switch to the map view.

The map label for this gene is pqqB

Identifier: 119897478

GI number: 119897478

Start: 1279714

End: 1280628

Strand: Direct

Name: pqqB

Synonym: azo1187

Alternate gene names: 119897478

Gene position: 1279714-1280628 (Clockwise)

Preceding gene: 119897477

Following gene: 119897479

Centisome position: 29.24

GC content: 69.07

Gene sequence:

>915_bases
GTGAAGGTTCGCGTACTCGGTTCGGCAGCCGGTGGCGGGTTTCCGCAGTGGAACTGCAACTGCCCCAATTGCGACGGGCT
GCGTCGCGGCACCGTCCGTGCGCGCGCCCGCACCCAGTCGTCGATCGCGGTGACGGGCGACGACGAGAACTGGGTGCTGT
TCAACGCTTCGCCCGATGTCCTCCAGCAACTGCGCGAGGCGCCTGAACTGCAGCCTGCCCGCGCGCTGCGCGACACTGCG
ATCCGCGCGATCGTGCTGATCGACGCCCAGATCGACCACACCACCGGCCTGTTGATGCTGCGCGAGCACCGCCAGCCCCA
CGCGCTATGGTGTACCGCGCCGGTGAGGGAGGACCTCTCCACCGGCAATCCGCTGTTCGGCGTGCTCGGACACTACTGCG
GGTTGGACCTGAACGAGATTCCGCTGCAGGGCGGCTTCGACATCGCCGGCGTGCCCGGCGTCGGCTTTGCCGCGCTGCCC
CTCACCAGCAATGCGCCGCCGTATTCGCCGCGCCGCGACAAGCCGGTGCCCGGTGACAACATCGGCGTCACCCTCACCGA
CACCCGCAGCGGCCGCAGGCTGTTCTACGCGCCCGGCCTCGGCGAGATGGAACCCCATGTGTGGGCGGCGATGCAGGCCG
CCGACTGCGTGCTGGTCGACGGCACCTTGTGGACCGACGACGAAATGATCCGCCTCGGCGCCTCCAGCAAGACCTCGCGC
GCGATGGGCCACCTGCCGCAGAGTGGCCCCGGCGGCATGCTGGAATGGCTGGACCGCTTGCCGGCCAGCACCCGCAAGGT
GCTGATCCACATCAACAACACCAACCCCATCCTGGACGAGGACAGCCCCCAGCGTGCCGAACTGGCCGCGCACGGCGTCG
AGGTCGCTTGGGACGGCATGGTGCTCTCGCTCTGA

Upstream 100 bases:

>100_bases
CGCCCCCTGGGGGGCGGCCGCGTGGCGGTTGGGGGCAAGGCATCGTCGCCGGGGCGCCGCGTTGCGGCTGCCCCTGCGAA
TATCCGCGGGAGGGCATGAG

Downstream 100 bases:

>100_bases
ACCGCTCCTCCTCCACGCCTTCAAGGATGTATCGCATGGAAGCCGAACTGCTCGCCGCGCCTGCTGCACGTACGCTTGCC
CCCAACGCCGGCACCCACGA

Product: pyrroloquinoline quinone biosynthesis protein PqqB

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein B

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKVRVLGSAAGGGFPQWNCNCPNCDGLRRGTVRARARTQSSIAVTGDDENWVLFNASPDVLQQLREAPELQPARALRDTA
IRAIVLIDAQIDHTTGLLMLREHRQPHALWCTAPVREDLSTGNPLFGVLGHYCGLDLNEIPLQGGFDIAGVPGVGFAALP
LTSNAPPYSPRRDKPVPGDNIGVTLTDTRSGRRLFYAPGLGEMEPHVWAAMQAADCVLVDGTLWTDDEMIRLGASSKTSR
AMGHLPQSGPGGMLEWLDRLPASTRKVLIHINNTNPILDEDSPQRAELAAHGVEVAWDGMVLSL

Sequences:

>Translated_304_residues
MKVRVLGSAAGGGFPQWNCNCPNCDGLRRGTVRARARTQSSIAVTGDDENWVLFNASPDVLQQLREAPELQPARALRDTA
IRAIVLIDAQIDHTTGLLMLREHRQPHALWCTAPVREDLSTGNPLFGVLGHYCGLDLNEIPLQGGFDIAGVPGVGFAALP
LTSNAPPYSPRRDKPVPGDNIGVTLTDTRSGRRLFYAPGLGEMEPHVWAAMQAADCVLVDGTLWTDDEMIRLGASSKTSR
AMGHLPQSGPGGMLEWLDRLPASTRKVLIHINNTNPILDEDSPQRAELAAHGVEVAWDGMVLSL
>Mature_304_residues
MKVRVLGSAAGGGFPQWNCNCPNCDGLRRGTVRARARTQSSIAVTGDDENWVLFNASPDVLQQLREAPELQPARALRDTA
IRAIVLIDAQIDHTTGLLMLREHRQPHALWCTAPVREDLSTGNPLFGVLGHYCGLDLNEIPLQGGFDIAGVPGVGFAALP
LTSNAPPYSPRRDKPVPGDNIGVTLTDTRSGRRLFYAPGLGEMEPHVWAAMQAADCVLVDGTLWTDDEMIRLGASSKTSR
AMGHLPQSGPGGMLEWLDRLPASTRKVLIHINNTNPILDEDSPQRAELAAHGVEVAWDGMVLSL

Specific function: May be involved in the transport of PQQ or its precursor to the periplasm

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PQQB_AZOSB (A1K4P9)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_932691.1
- ProteinModelPortal:   A1K4P9
- SMR:   A1K4P9
- STRING:   A1K4P9
- GeneID:   4606733
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo1187
- eggNOG:   COG1235
- HOGENOM:   HBG531193
- OMA:   QIDHTTG
- ProtClustDB:   PRK05184
- BioCyc:   ASP62928:AZO1187-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_00653
- InterPro:   IPR011842
- TIGRFAMs:   TIGR02108

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32843; Mature: 32843

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRVLGSAAGGGFPQWNCNCPNCDGLRRGTVRARARTQSSIAVTGDDENWVLFNASPDV
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCEEEEECCHHH
LQQLREAPELQPARALRDTAIRAIVLIDAQIDHTTGLLMLREHRQPHALWCTAPVREDLS
HHHHHCCCCCCHHHHHHHHHEEEEEEEECEECCCCCEEEEECCCCCCEEEEECCHHHHHC
TGNPLFGVLGHYCGLDLNEIPLQGGFDIAGVPGVGFAALPLTSNAPPYSPRRDKPVPGDN
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
IGVTLTDTRSGRRLFYAPGLGEMEPHVWAAMQAADCVLVDGTLWTDDEMIRLGASSKTSR
EEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHCCEEEECCEEECCCCEEEECCCCCHHH
AMGHLPQSGPGGMLEWLDRLPASTRKVLIHINNTNPILDEDSPQRAELAAHGVEVAWDGM
HHHCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCEEEECCE
VLSL
EEEC
>Mature Secondary Structure
MKVRVLGSAAGGGFPQWNCNCPNCDGLRRGTVRARARTQSSIAVTGDDENWVLFNASPDV
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCEEEEECCHHH
LQQLREAPELQPARALRDTAIRAIVLIDAQIDHTTGLLMLREHRQPHALWCTAPVREDLS
HHHHHCCCCCCHHHHHHHHHEEEEEEEECEECCCCCEEEEECCCCCCEEEEECCHHHHHC
TGNPLFGVLGHYCGLDLNEIPLQGGFDIAGVPGVGFAALPLTSNAPPYSPRRDKPVPGDN
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
IGVTLTDTRSGRRLFYAPGLGEMEPHVWAAMQAADCVLVDGTLWTDDEMIRLGASSKTSR
EEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHCCEEEECCEEECCCCEEEECCCCCHHH
AMGHLPQSGPGGMLEWLDRLPASTRKVLIHINNTNPILDEDSPQRAELAAHGVEVAWDGM
HHHCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCEEEECCE
VLSL
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA