| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yjcG [C]
Identifier: 119897440
GI number: 119897440
Start: 1236315
End: 1238120
Strand: Direct
Name: yjcG [C]
Synonym: azo1149
Alternate gene names: 119897440
Gene position: 1236315-1238120 (Clockwise)
Preceding gene: 119897439
Following gene: 119897441
Centisome position: 28.25
GC content: 64.51
Gene sequence:
>1806_bases ATGGATCTGCAAACCATTACCTATCTTGTGGTCGGTGCCAGCTTCGCGCTGTATATCGGCATCGCCATCTGGGCCCGTGC GGGTAGCACGAGCGAGTTCTACGTTGCCGGCGGCGGCGTGCATCCGGTTACCAACGGCATGGCGACGGCGGCCGACTGGA TGTCCGCCGCGTCCTTCATCTCCATGGCCGGCCTGATCGCCAACATGGGCTACGGTGGCGGCCTGTTCCTGATGGGCTGG ACCGGCGGCTACGTGTTGCTGGCGATGCTGCTGGCGCCGTACCTGCGCAAGTTCGGCAAGTTCACCGTGCCCCAGTTCAT CGGCGACCGCTTCTACTCGAAGTCGGCCAGCACGGTGGCGGTGGTGTGCCTGCTGACCGCGTCGATCACCTACGTCATCG GCCAGATGACCGGGGTCGGCGTGGCGTTCTCGCGCTTCCTCGGCGTCAGCAACGACATGGGCATCTACATCGGCATGGGC ATCGTGTTCATGTACGCGGTGTTCGGCGGCATGAAGGGCATCACCTACACCCAGGTGGCGCAGTACATCGTGCTGATCCT CGCCTACACCATCCCGGCGATCTTCATTGCCCTGCAGCTGACCGGCAACCCGATTCCGCAGCTCGGCCTGGGCAGCGACC TCTCGGGCACCGACGTTTCGCTGCTGCAGCGTCTCAACCAGGTCGTCACCGACCTCGGCTTCGGCGAATACACCACCTCG GTGCCGGGCAGCACGCTCAACATGTTCGTCTACACCGTGTCGCTGATGATCGGTACGGCGGGCCTGCCGCACGTGATCGT GCGCTTCTTCACCGTGCCGAAGGTGAAGGACGCGCGCAGCTCCGCGGGCTGGGCGCTGGTCTTCATCGCCATCCTGTACA CCACCGCGCCGGCCGTTGCGGCGATGGCCAAGTACAACCTGCACGCCACGGTGAACTCCGCGGTGACGACGGGCGGCGAT CTGTACGCCACCGAGGCCAGCATCAAGGCAGAGGAGCGTCCGGACTGGATGAAGCGCTGGGAAAAGACCGGTCTGCTGAA GTTCGAGGACAAGAACGGCGACGGCCGCATCCAGTACTACAACGACGCCACCAAGAACGCCGATGCCAAGGCCAAGGCCG AAGCCGCCGGCTGGAAGGGCAACGAGCTGTCGGTCAACGCCGACATCATCGTGCTGGCCAACCCGGAAATCGCGCTGCTG CCCAACTGGGTGATCGCGCTGATCGCCGCGGGTGGTCTGGCTGCCGCGCTGTCCACCGCCGCCGGCCTGCTGATGGCGAT CTCGTCCGCGGTGTCGCACGACCTGGTGAAGAACGTCTTCATGCCGGGCATCTCGGAGAAGGGCGAACTGATGGCGGGCA AGCTGTCGATGGCGGTGGCGATCGTGATCGCCGGCTATCTCGGCCTTAACCCCCCGGGCTTCGCTGCAGGCACCGTGGCG CTCGCGTTCGGTATTGCCGCCTCGTCGCTGTTCCCGGCGATCATGATGGGCATCTTCTCCAAGAAGATGAACAAGGAAGG CGCCATCGCCGGCATGCTGGCAGGCCTGTTCGTCACCTGCTTCTACGTGTTCGCGCACAAGGGCCTGTTCTTCATCAAGG GCACCGAGTTCGTCGACATGATCGGCGGTCCGAACGCCTTCTTCGGCATCACCCCTGAAGCCTTCGGCGCGATCGGCGCG CTGGTCAACTTCGGCGTCGCCTTCGCGGTCGACAAGGTGACGAAGGAACCGCCGGAGCACATCCAGCATCTGGTGGAAAG CGTGCGCATCCCGCGTGGTGCGAAGGCTGTCGACGGCGCTCACTGA
Upstream 100 bases:
>100_bases ATCAATCTACGTCTTCGTCATTCTCATCTTCTACTACGCGAAGAAGATGGCGCAGATCGACGAACGGTTCGACGTACACG AAGACTGAGGAGCCCGACAC
Downstream 100 bases:
>100_bases GCGTTGCCAGTCCTGCCGTCCGTGCCGCGCGCAGCGGCGCGGACGCAGCCCCCGCCCCCGGCGGGGTTTTCATTTCAGGT CCGGGGCACTGCGGCAGTGC
Product: putative sodium:solute symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MDLQTITYLVVGASFALYIGIAIWARAGSTSEFYVAGGGVHPVTNGMATAADWMSAASFISMAGLIANMGYGGGLFLMGW TGGYVLLAMLLAPYLRKFGKFTVPQFIGDRFYSKSASTVAVVCLLTASITYVIGQMTGVGVAFSRFLGVSNDMGIYIGMG IVFMYAVFGGMKGITYTQVAQYIVLILAYTIPAIFIALQLTGNPIPQLGLGSDLSGTDVSLLQRLNQVVTDLGFGEYTTS VPGSTLNMFVYTVSLMIGTAGLPHVIVRFFTVPKVKDARSSAGWALVFIAILYTTAPAVAAMAKYNLHATVNSAVTTGGD LYATEASIKAEERPDWMKRWEKTGLLKFEDKNGDGRIQYYNDATKNADAKAKAEAAGWKGNELSVNADIIVLANPEIALL PNWVIALIAAGGLAAALSTAAGLLMAISSAVSHDLVKNVFMPGISEKGELMAGKLSMAVAIVIAGYLGLNPPGFAAGTVA LAFGIAASSLFPAIMMGIFSKKMNKEGAIAGMLAGLFVTCFYVFAHKGLFFIKGTEFVDMIGGPNAFFGITPEAFGAIGA LVNFGVAFAVDKVTKEPPEHIQHLVESVRIPRGAKAVDGAH
Sequences:
>Translated_601_residues MDLQTITYLVVGASFALYIGIAIWARAGSTSEFYVAGGGVHPVTNGMATAADWMSAASFISMAGLIANMGYGGGLFLMGW TGGYVLLAMLLAPYLRKFGKFTVPQFIGDRFYSKSASTVAVVCLLTASITYVIGQMTGVGVAFSRFLGVSNDMGIYIGMG IVFMYAVFGGMKGITYTQVAQYIVLILAYTIPAIFIALQLTGNPIPQLGLGSDLSGTDVSLLQRLNQVVTDLGFGEYTTS VPGSTLNMFVYTVSLMIGTAGLPHVIVRFFTVPKVKDARSSAGWALVFIAILYTTAPAVAAMAKYNLHATVNSAVTTGGD LYATEASIKAEERPDWMKRWEKTGLLKFEDKNGDGRIQYYNDATKNADAKAKAEAAGWKGNELSVNADIIVLANPEIALL PNWVIALIAAGGLAAALSTAAGLLMAISSAVSHDLVKNVFMPGISEKGELMAGKLSMAVAIVIAGYLGLNPPGFAAGTVA LAFGIAASSLFPAIMMGIFSKKMNKEGAIAGMLAGLFVTCFYVFAHKGLFFIKGTEFVDMIGGPNAFFGITPEAFGAIGA LVNFGVAFAVDKVTKEPPEHIQHLVESVRIPRGAKAVDGAH >Mature_601_residues MDLQTITYLVVGASFALYIGIAIWARAGSTSEFYVAGGGVHPVTNGMATAADWMSAASFISMAGLIANMGYGGGLFLMGW TGGYVLLAMLLAPYLRKFGKFTVPQFIGDRFYSKSASTVAVVCLLTASITYVIGQMTGVGVAFSRFLGVSNDMGIYIGMG IVFMYAVFGGMKGITYTQVAQYIVLILAYTIPAIFIALQLTGNPIPQLGLGSDLSGTDVSLLQRLNQVVTDLGFGEYTTS VPGSTLNMFVYTVSLMIGTAGLPHVIVRFFTVPKVKDARSSAGWALVFIAILYTTAPAVAAMAKYNLHATVNSAVTTGGD LYATEASIKAEERPDWMKRWEKTGLLKFEDKNGDGRIQYYNDATKNADAKAKAEAAGWKGNELSVNADIIVLANPEIALL PNWVIALIAAGGLAAALSTAAGLLMAISSAVSHDLVKNVFMPGISEKGELMAGKLSMAVAIVIAGYLGLNPPGFAAGTVA LAFGIAASSLFPAIMMGIFSKKMNKEGAIAGMLAGLFVTCFYVFAHKGLFFIKGTEFVDMIGGPNAFFGITPEAFGAIGA LVNFGVAFAVDKVTKEPPEHIQHLVESVRIPRGAKAVDGAH
Specific function: Unknown
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Escherichia coli, GI1790503, Length=297, Percent_Identity=29.2929292929293, Blast_Score=119, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR019899 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 63216; Mature: 63216
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLQTITYLVVGASFALYIGIAIWARAGSTSEFYVAGGGVHPVTNGMATAADWMSAASFI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH SMAGLIANMGYGGGLFLMGWTGGYVLLAMLLAPYLRKFGKFTVPQFIGDRFYSKSASTVA HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH VVCLLTASITYVIGQMTGVGVAFSRFLGVSNDMGIYIGMGIVFMYAVFGGMKGITYTQVA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH QYIVLILAYTIPAIFIALQLTGNPIPQLGLGSDLSGTDVSLLQRLNQVVTDLGFGEYTTS HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC VPGSTLNMFVYTVSLMIGTAGLPHVIVRFFTVPKVKDARSSAGWALVFIAILYTTAPAVA CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AMAKYNLHATVNSAVTTGGDLYATEASIKAEERPDWMKRWEKTGLLKFEDKNGDGRIQYY HHHHHCEEEEECCHHCCCCCEEEECCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCEEEE NDATKNADAKAKAEAAGWKGNELSVNADIIVLANPEIALLPNWVIALIAAGGLAAALSTA CCCCCCCCCHHHHHHCCCCCCEEEECCEEEEEECCCEEECHHHHHHHHHHCHHHHHHHHH AGLLMAISSAVSHDLVKNVFMPGISEKGELMAGKLSMAVAIVIAGYLGLNPPGFAAGTVA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LAFGIAASSLFPAIMMGIFSKKMNKEGAIAGMLAGLFVTCFYVFAHKGLFFIKGTEFVDM HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHH IGGPNAFFGITPEAFGAIGALVNFGVAFAVDKVTKEPPEHIQHLVESVRIPRGAKAVDGA CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC H C >Mature Secondary Structure MDLQTITYLVVGASFALYIGIAIWARAGSTSEFYVAGGGVHPVTNGMATAADWMSAASFI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH SMAGLIANMGYGGGLFLMGWTGGYVLLAMLLAPYLRKFGKFTVPQFIGDRFYSKSASTVA HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH VVCLLTASITYVIGQMTGVGVAFSRFLGVSNDMGIYIGMGIVFMYAVFGGMKGITYTQVA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH QYIVLILAYTIPAIFIALQLTGNPIPQLGLGSDLSGTDVSLLQRLNQVVTDLGFGEYTTS HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC VPGSTLNMFVYTVSLMIGTAGLPHVIVRFFTVPKVKDARSSAGWALVFIAILYTTAPAVA CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AMAKYNLHATVNSAVTTGGDLYATEASIKAEERPDWMKRWEKTGLLKFEDKNGDGRIQYY HHHHHCEEEEECCHHCCCCCEEEECCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCEEEE NDATKNADAKAKAEAAGWKGNELSVNADIIVLANPEIALLPNWVIALIAAGGLAAALSTA CCCCCCCCCHHHHHHCCCCCCEEEECCEEEEEECCCEEECHHHHHHHHHHCHHHHHHHHH AGLLMAISSAVSHDLVKNVFMPGISEKGELMAGKLSMAVAIVIAGYLGLNPPGFAAGTVA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LAFGIAASSLFPAIMMGIFSKKMNKEGAIAGMLAGLFVTCFYVFAHKGLFFIKGTEFVDM HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHH IGGPNAFFGITPEAFGAIGALVNFGVAFAVDKVTKEPPEHIQHLVESVRIPRGAKAVDGA CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC H C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1356967 [H]