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The map label for this gene is ycgE [C]

Identifier: 119897377

GI number: 119897377

Start: 1169628

End: 1170008

Strand: Direct

Name: ycgE [C]

Synonym: azo1086

Alternate gene names: 119897377

Gene position: 1169628-1170008 (Clockwise)

Preceding gene: 119897376

Following gene: 119897378

Centisome position: 26.73

GC content: 61.42

Gene sequence:

>381_bases
ATGCAAGCAAGCAGCCCTGACGTCGATGACACCGAGCTTCCACCCATCCCGGCCAAGCGCTACTTCACCATCGGTGAAGT
CAGCGAGTTGTGTGCGGTCAAGCCCCACGTGCTGCGATATTGGGAGCAGGAGTTCACCCAGCTGAAGCCGGTCAAGCGCC
GGGGCAACCGGCGTTATTACCAGCACCACGAAGTCCTCCTGATCCGGCGCATCCGCCAGCTGTTGTATAGCGAAGGGTTC
ACGATTTCGGGAGCGCGCAATCGGTTGTGCGAAGGCGAAATCCTGCACCAGGAGGAGACCGCCGAGCTTGAGCGCTGCCA
GTCGCAACTGCGTGCTGTAAGGGCAGGGTTGATGGAGGCGTTGGCCGTCCTGAGGGCCTGA

Upstream 100 bases:

>100_bases
CGGAATCCGAAGACGGGGGAGGAAATCCCGATTACCGCGCGGCGGGTCGTGACTTTCCATGCCAGCCAGAAATTGAAGGC
CGCCGTGGAGCAGCTGAGCG

Downstream 100 bases:

>100_bases
ATCAGATTGCTGGCGTTTTCTTGAAGCGGTGCTATAATGTTCGCTTAGTCGGGGCGTAGCGCAGCCTGGTAGCGCACTTG
CATGGGGTGCAAGGGGTCGC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcription Regulator Protein; Regulatory Protein MerR; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Trancriptional Regulator MerR Family; Transcriptional Regulator Protein; MerR Family Regulatory Protein; Transcriptional Regulator MerR; TRANSCRIPTIONal REGULATOR MerR Family; Transcriptional Regulatory Protein; Regulatory Protein Merr; MerR Family Regulatory Family; Transcriptional Regulator Protein MerR Family; Bacterial Transferase Hexapeptide Repeat Protein; Transcriptional Regulator Domain-Containing Protein; MerR Protein

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MQASSPDVDDTELPPIPAKRYFTIGEVSELCAVKPHVLRYWEQEFTQLKPVKRRGNRRYYQHHEVLLIRRIRQLLYSEGF
TISGARNRLCEGEILHQEETAELERCQSQLRAVRAGLMEALAVLRA

Sequences:

>Translated_126_residues
MQASSPDVDDTELPPIPAKRYFTIGEVSELCAVKPHVLRYWEQEFTQLKPVKRRGNRRYYQHHEVLLIRRIRQLLYSEGF
TISGARNRLCEGEILHQEETAELERCQSQLRAVRAGLMEALAVLRA
>Mature_126_residues
MQASSPDVDDTELPPIPAKRYFTIGEVSELCAVKPHVLRYWEQEFTQLKPVKRRGNRRYYQHHEVLLIRRIRQLLYSEGF
TISGARNRLCEGEILHQEETAELERCQSQLRAVRAGLMEALAVLRA

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14677; Mature: 14677

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASSPDVDDTELPPIPAKRYFTIGEVSELCAVKPHVLRYWEQEFTQLKPVKRRGNRRYY
CCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHH
QHHEVLLIRRIRQLLYSEGFTISGARNRLCEGEILHQEETAELERCQSQLRAVRAGLMEA
HHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LAVLRA
HHHHCC
>Mature Secondary Structure
MQASSPDVDDTELPPIPAKRYFTIGEVSELCAVKPHVLRYWEQEFTQLKPVKRRGNRRYY
CCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHH
QHHEVLLIRRIRQLLYSEGFTISGARNRLCEGEILHQEETAELERCQSQLRAVRAGLMEA
HHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LAVLRA
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA