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The map label for this gene is dedA [H]

Identifier: 119897213

GI number: 119897213

Start: 988762

End: 989409

Strand: Direct

Name: dedA [H]

Synonym: azo0922

Alternate gene names: 119897213

Gene position: 988762-989409 (Clockwise)

Preceding gene: 119897212

Following gene: 119897214

Centisome position: 22.59

GC content: 64.04

Gene sequence:

>648_bases
ATGGACATCATCGCCTCCTTCATTGACCTCTTTCTCCACCTGGACAGACACCTCGCCGAGTTGCTGGCCGACTACGGCAG
CTGGATTTACGCGATCCTGTTCCTGATCGTGTTCTGCGAAACCGGCCTGGTGGTGATGCCTTTCCTGCCGGGTGATTCGC
TGCTGTTCATGGCGGGCGCACTGGCTGCGGGCGGCGGCATGGATCCGGCCGTGCTGATCGGCGTGCTGTTCGTGGCCGCG
GTGCTGGGCGATTCGCTGAACTACACCATCGGCCGGCGCTTCGGCCAGCGCATTTCACAGTGGCCGGACAGCCGCTTCTT
CAACCGCAAGGCGCTCGAGCGCACGCACGCGTTCTACGAACGGCACGGCGGCAAGACCATCGTGATCGCACGCTTCATGC
CCATCATCCGCACCTTCGCGCCCTTCGTCGCCGGCATGGGGCAGATGGAATACCGCCGCTTCATCGCCTTCAACGTCCTC
GGTGCGGCGCTGTGGGTCGGCCCGCTGATCATGGCCGGTTACTGGTTCGGCAACCTGCCGGTGGTCAAAAACAACCTGTC
CATCGTGGTGCTGGGAATCATCGTGTTGTCGCTGATGCCCCTGGTCATCGGCTGGCTGCGCCAGCAGGCCGGGCGCGCCA
GCGCCTGA

Upstream 100 bases:

>100_bases
TTTCGTTTGGGCCGGGGCGGGCTGTTTCGCCGTGTATCGACCGGCAGCCGTTGCGCCCGTGCTCGGGTAAGATCGCAGCA
GTTTCCAGTTCGGGCGCTCC

Downstream 100 bases:

>100_bases
CCCGGCCGGCGCGACAGGCTGTCGCCGAGGTGTAGCGGAAACCTGCTAAAATTCCGCGTTTTGTCAAACACCCTCGGAGT
TTTTCCATGGCCATCGAACG

Product: DedA protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MDIIASFIDLFLHLDRHLAELLADYGSWIYAILFLIVFCETGLVVMPFLPGDSLLFMAGALAAGGGMDPAVLIGVLFVAA
VLGDSLNYTIGRRFGQRISQWPDSRFFNRKALERTHAFYERHGGKTIVIARFMPIIRTFAPFVAGMGQMEYRRFIAFNVL
GAALWVGPLIMAGYWFGNLPVVKNNLSIVVLGIIVLSLMPLVIGWLRQQAGRASA

Sequences:

>Translated_215_residues
MDIIASFIDLFLHLDRHLAELLADYGSWIYAILFLIVFCETGLVVMPFLPGDSLLFMAGALAAGGGMDPAVLIGVLFVAA
VLGDSLNYTIGRRFGQRISQWPDSRFFNRKALERTHAFYERHGGKTIVIARFMPIIRTFAPFVAGMGQMEYRRFIAFNVL
GAALWVGPLIMAGYWFGNLPVVKNNLSIVVLGIIVLSLMPLVIGWLRQQAGRASA
>Mature_215_residues
MDIIASFIDLFLHLDRHLAELLADYGSWIYAILFLIVFCETGLVVMPFLPGDSLLFMAGALAAGGGMDPAVLIGVLFVAA
VLGDSLNYTIGRRFGQRISQWPDSRFFNRKALERTHAFYERHGGKTIVIARFMPIIRTFAPFVAGMGQMEYRRFIAFNVL
GAALWVGPLIMAGYWFGNLPVVKNNLSIVVLGIIVLSLMPLVIGWLRQQAGRASA

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=210, Percent_Identity=57.6190476190476, Blast_Score=261, Evalue=2e-71,
Organism=Escherichia coli, GI1789384, Length=194, Percent_Identity=35.5670103092784, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1789481, Length=155, Percent_Identity=37.4193548387097, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1786252, Length=133, Percent_Identity=30.8270676691729, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23783; Mature: 23783

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIIASFIDLFLHLDRHLAELLADYGSWIYAILFLIVFCETGLVVMPFLPGDSLLFMAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH
LAAGGGMDPAVLIGVLFVAAVLGDSLNYTIGRRFGQRISQWPDSRFFNRKALERTHAFYE
HHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RHGGKTIVIARFMPIIRTFAPFVAGMGQMEYRRFIAFNVLGAALWVGPLIMAGYWFGNLP
HCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VVKNNLSIVVLGIIVLSLMPLVIGWLRQQAGRASA
EEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDIIASFIDLFLHLDRHLAELLADYGSWIYAILFLIVFCETGLVVMPFLPGDSLLFMAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH
LAAGGGMDPAVLIGVLFVAAVLGDSLNYTIGRRFGQRISQWPDSRFFNRKALERTHAFYE
HHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RHGGKTIVIARFMPIIRTFAPFVAGMGQMEYRRFIAFNVLGAALWVGPLIMAGYWFGNLP
HCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VVKNNLSIVVLGIIVLSLMPLVIGWLRQQAGRASA
EEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]