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The map label for this gene is dctM2 [C]

Identifier: 119897212

GI number: 119897212

Start: 987325

End: 988611

Strand: Direct

Name: dctM2 [C]

Synonym: azo0921

Alternate gene names: 119897212

Gene position: 987325-988611 (Clockwise)

Preceding gene: 119897211

Following gene: 119897213

Centisome position: 22.56

GC content: 62.86

Gene sequence:

>1287_bases
ATGACCAATACGCTTGCGATTTTCGGCCTGCTCATCGTCCTGATGGCGATCGGCATGCCGGTGGGTGTGGCGCTCGGCCT
GACCGTGCTGAGCTTCATGTTCATCTTTACCGACGTGCCGCTCGAGTCCGTGGCGCTCAAGATGTTCACCGGCATCGAGA
AGTTCGAGATCATGGCGATCCCGTTCTTCATCCTGGCCGGCAACTTCCTCACCCATGGCGGGGTGGCGCGACGGATGATC
AACTTCGCCACCTCGATGGTGGGCCACCTGCGCGGCGGCCTGGGCATGTCGGCGGTGCTGGCGTGCGCGCTGTTCGCCGC
GGTGTCCGGTTCCAGTCCGGCAACCGTGGTGGCGATCGGCTCCATCCTGATTCCGGCGATGATCAAGCAGGGCTACCCGC
TGCGCTTCGGTGCCGGCGTCGTTGCCTCGGCCGGCGGCCTCGGCATCCTGATCCCGCCGTCGATCGTGATGGTGATGTAC
TCGGTGACGACCAACACCTCGGTCGGCGCGTTGTTCATGGCAGGCGTGATTCCGGGTCTGCTGCTGGCCTTCATGCTGGG
CCTGTGCACTTGGTACGTGGCGCACAAGAACAACTATCCGACGCTGCCGCGGACGAGCTGGGCGGAGCGCATCAAGCACT
TCCGCAAGGCCTTCTGGGGGCTGATGCTGATCGTGGTGGTGATGGGCGGCATCTACTCGGGCATGTTCACCCCGACCGAG
GCGGCGGCGATGAGCGCGGTGTATGCGTTCATCATCGCGGTCTTCGTCTATAAGGATCTGACCTTCAAGCAGATTCCGCG
GGTGCTGCTCGACTCCGCGAACATGAGCGCGATGTTGCTGTTCATCATCGCCAGCGCGGTGCTGTTCTCCTTCATTCTGA
CCAGCGAGCAGATTCCGCAGCGCATGGCCGACGCCATCGTCGCCAGCGGCATGGGACCGATCGGCTTCCTGATCGTGGTG
AACCTGCTGTTGCTGGTGGCGGGCGCGCTGATGGAGCCGTCGTCGATCATCCTGATCCTGGCGCCCATCCTGTTCCCGGT
GGCGGTCGCGCTGGGCATCGACCCGATCCACTTCGGCGTGATGATCGTGGTCAACATGGAAATCGGCATGATCACGCCGC
CGGTGGGTCTGAACCTCTTCGTCGCGAGCGGCATCACCAAGGCCGGCCTCACCGAGATGAGCAAGGCCGTCATGCCCTGG
CTCGTCACGATGCTGGTATTCCTGATGTTGATCACCTACATCCCGAGCATCTCGACCTTCCTGCCGAAAGCGCTTGGCGT
CATGTAA

Upstream 100 bases:

>100_bases
AGGGTGAAGCGATCACCATCGGCGAAGACATCGCCCACGGCGCGAACGGCTCGTCCGCGCGCAACGACTCCGCCGGGCGG
CGCTGAAAGGAGCGACCAAA

Downstream 100 bases:

>100_bases
CGAGGAAGTTTCATTCCTGATCATGAAGGGCCCGGTCGAAACCGGGCCCTTTTCGTTTGGGCCGGGGCGGGCTGTTTCGC
CGTGTATCGACCGGCAGCCG

Product: putative TRAP-type C4-dicarboxylate transport system large permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MTNTLAIFGLLIVLMAIGMPVGVALGLTVLSFMFIFTDVPLESVALKMFTGIEKFEIMAIPFFILAGNFLTHGGVARRMI
NFATSMVGHLRGGLGMSAVLACALFAAVSGSSPATVVAIGSILIPAMIKQGYPLRFGAGVVASAGGLGILIPPSIVMVMY
SVTTNTSVGALFMAGVIPGLLLAFMLGLCTWYVAHKNNYPTLPRTSWAERIKHFRKAFWGLMLIVVVMGGIYSGMFTPTE
AAAMSAVYAFIIAVFVYKDLTFKQIPRVLLDSANMSAMLLFIIASAVLFSFILTSEQIPQRMADAIVASGMGPIGFLIVV
NLLLLVAGALMEPSSIILILAPILFPVAVALGIDPIHFGVMIVVNMEIGMITPPVGLNLFVASGITKAGLTEMSKAVMPW
LVTMLVFLMLITYIPSISTFLPKALGVM

Sequences:

>Translated_428_residues
MTNTLAIFGLLIVLMAIGMPVGVALGLTVLSFMFIFTDVPLESVALKMFTGIEKFEIMAIPFFILAGNFLTHGGVARRMI
NFATSMVGHLRGGLGMSAVLACALFAAVSGSSPATVVAIGSILIPAMIKQGYPLRFGAGVVASAGGLGILIPPSIVMVMY
SVTTNTSVGALFMAGVIPGLLLAFMLGLCTWYVAHKNNYPTLPRTSWAERIKHFRKAFWGLMLIVVVMGGIYSGMFTPTE
AAAMSAVYAFIIAVFVYKDLTFKQIPRVLLDSANMSAMLLFIIASAVLFSFILTSEQIPQRMADAIVASGMGPIGFLIVV
NLLLLVAGALMEPSSIILILAPILFPVAVALGIDPIHFGVMIVVNMEIGMITPPVGLNLFVASGITKAGLTEMSKAVMPW
LVTMLVFLMLITYIPSISTFLPKALGVM
>Mature_427_residues
TNTLAIFGLLIVLMAIGMPVGVALGLTVLSFMFIFTDVPLESVALKMFTGIEKFEIMAIPFFILAGNFLTHGGVARRMIN
FATSMVGHLRGGLGMSAVLACALFAAVSGSSPATVVAIGSILIPAMIKQGYPLRFGAGVVASAGGLGILIPPSIVMVMYS
VTTNTSVGALFMAGVIPGLLLAFMLGLCTWYVAHKNNYPTLPRTSWAERIKHFRKAFWGLMLIVVVMGGIYSGMFTPTEA
AAMSAVYAFIIAVFVYKDLTFKQIPRVLLDSANMSAMLLFIIASAVLFSFILTSEQIPQRMADAIVASGMGPIGFLIVVN
LLLLVAGALMEPSSIILILAPILFPVAVALGIDPIHFGVMIVVNMEIGMITPPVGLNLFVASGITKAGLTEMSKAVMPWL
VTMLVFLMLITYIPSISTFLPKALGVM

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=413, Percent_Identity=35.1089588377724, Blast_Score=245, Evalue=4e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 45416; Mature: 45285

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTLAIFGLLIVLMAIGMPVGVALGLTVLSFMFIFTDVPLESVALKMFTGIEKFEIMAI
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHH
PFFILAGNFLTHGGVARRMINFATSMVGHLRGGLGMSAVLACALFAAVSGSSPATVVAIG
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
SILIPAMIKQGYPLRFGAGVVASAGGLGILIPPSIVMVMYSVTTNTSVGALFMAGVIPGL
HHHHHHHHHCCCCCEECCCHHCCCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LLAFMLGLCTWYVAHKNNYPTLPRTSWAERIKHFRKAFWGLMLIVVVMGGIYSGMFTPTE
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AAAMSAVYAFIIAVFVYKDLTFKQIPRVLLDSANMSAMLLFIIASAVLFSFILTSEQIPQ
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RMADAIVASGMGPIGFLIVVNLLLLVAGALMEPSSIILILAPILFPVAVALGIDPIHFGV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHEEE
MIVVNMEIGMITPPVGLNLFVASGITKAGLTEMSKAVMPWLVTMLVFLMLITYIPSISTF
EEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPKALGVM
HHHHHCCC
>Mature Secondary Structure 
TNTLAIFGLLIVLMAIGMPVGVALGLTVLSFMFIFTDVPLESVALKMFTGIEKFEIMAI
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHH
PFFILAGNFLTHGGVARRMINFATSMVGHLRGGLGMSAVLACALFAAVSGSSPATVVAIG
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
SILIPAMIKQGYPLRFGAGVVASAGGLGILIPPSIVMVMYSVTTNTSVGALFMAGVIPGL
HHHHHHHHHCCCCCEECCCHHCCCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LLAFMLGLCTWYVAHKNNYPTLPRTSWAERIKHFRKAFWGLMLIVVVMGGIYSGMFTPTE
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AAAMSAVYAFIIAVFVYKDLTFKQIPRVLLDSANMSAMLLFIIASAVLFSFILTSEQIPQ
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RMADAIVASGMGPIGFLIVVNLLLLVAGALMEPSSIILILAPILFPVAVALGIDPIHFGV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHEEE
MIVVNMEIGMITPPVGLNLFVASGITKAGLTEMSKAVMPWLVTMLVFLMLITYIPSISTF
EEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPKALGVM
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]